Dictyostelium discoideum cDNA Clone VSF727

Sequence VSF727

CAAATATAAA ACAAAAATGA ATAAATTCAT TATTGGTTTC TTTTTATGTT
TAACTGTTTT TTTAACCTTT GTAAATAGTT CAGAAATTGA TCATCAATAC
TCACTCACAA GTAGTATTAA TGGAAGTAGC AGTGGTGTAA GTAATTCAAC
AGATAACACT GGTTGTGGTG AATACACTTC ATGTGGTGAT TGTAGAGAAG
ATAAAGGATG TGTTTGGTGT GGATCAGAAG GTATTTGCAC TGAAGGTACA
TTCTATGGTA CTAAACCATT AAATATCAAT GGTGCCTGTA AAGATTTCAT
GTGGATGCAA TGTAAAATTC AAGGTCGTTG GGCAATTTTA ATTGCTGCTG
GTGGTGCCTT CTTAATTATT GTCTTCTTCT TTATTTGCCT TTGTTGTTGT
TGTTGTAGAA GAAAGAAAGA TAAACACTAT CATAACATTC AAGATGATGA
AACTGAACGT TTGGTTTCTC GTACTCCAAT CACTGATAGA CGTAGAGATG
AAATGAGAGC TA-------- --CCACGCGT CCCGCAAATA TAAAACAAAA
ATGAATAAAT TCATTATTGG TTTCTTTTTA TGTTTAACTG TTTTTTTAAC
CTTTGTAAAT AGTTCAGAAA TTGATCATCA ATACTCACTC ACAAGTAGTA
TTAATGGAAG TAGCAGTGGT GTAAGTAATT CAACAGATAA CACTGGTTGT
GGTGAATACA CTTCATGTGG TGATTGTAGA GAAGATAAAG GATGTGTTTG
GTGTGGATCA GAAGGTATTT GCACTGAAGG TACATTCTAT GGTACTAAAC
CATTAAATAT CAATGGTGCC TGTAAAGATT TCATGTGGAT GCAATGTAAA
ATTCAAGGTC GTTGGGCAAT TTTAATTGCT GCTGGTGGTG CCTTCTTAAT
TATTGTCTTC TTCTTTATTT GCCTTTGTTG TTGTTGTTGT AGAAGAAAGA
AAGATAAACA CTATCATAAC ATTCAAGATG ATGAAACTGA ACGTTTGGTT
TCTCGTACTC CAATCACTGA TAGACGTAGA GATGAAATGA GAGCTAAATG
GGGTATTGGT GCTAAAAATA ACAACAACAG CTCAAGTTAC CAAAGTGATT
CATGGAGATA ATCTAGTAAA ATATAATTCC AAATTTATAA TAATAAATAA
TATAATATAA TATAATAATA ATA

Translated Amino Acid Sequence VSF727

KYKTKMNKFIIGFFLCLTVFLTFVNSSEIDHQYSLTSSINGSSSGVSNSTDNTGCGEYTS
CGDCREDKGCVWCGSEGICTEGTFYGTKPLNINGACKDFMWMQCKIQGRWAILIAAGGAF
LIIVFFFICLCCCCCRRKKDKHYHNIQDDETERLVSRTPITDRRRDEMRA---

---HASRKYKTKMNKFIIGFFLCLTVFLTFVNSSEIDHQYSLTSSINGSSSGVSNSTDNT
GCGEYTSCGDCREDKGCVWCGSEGICTEGTFYGTKPLNINGACKDFMWMQCKIQGRWAIL
IAAGGAFLIIVFFFICLCCCCCRRKKDKHYHNIQDDETERLVSRTPITDRRRDEMRAKWG
IGAKNNNNSSSYQSDSWR*sski*fqiynnk*ynii***

Homology VSF727 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSF727 (VSF727Q) /CSM/VS/VSF7-B/VSF727Q.Seq.d/                       2070   0.0
VSD385 (VSD385Q) /CSM/VS/VSD3-D/VSD385Q.Seq.d/                       1112   0.0
SSL667 (SSL667Q) /CSM/SS/SSL6-C/SSL667Q.Seq.d/                       1112   0.0
SSK837 (SSK837Q) /CSM/SS/SSK8-B/SSK837Q.Seq.d/                       1112   0.0
SLB315 (SLB315Q) /CSM/SL/SLB3-A/SLB315Q.Seq.d/                       1112   0.0
VSF765 (VSF765Q) /CSM/VS/VSF7-C/VSF765Q.Seq.d/                       1098   0.0
VSD765 (VSD765Q) /CSM/VS/VSD7-C/VSD765Q.Seq.d/                       1084   0.0
SSJ375 (SSJ375Q) /CSM/SS/SSJ3-D/SSJ375Q.Seq.d/                       1084   0.0
VSI540 (VSI540Q) /CSM/VS/VSI5-B/VSI540Q.Seq.d/                       1074   0.0
SSE803 (SSE803Q) /CSM/SS/SSE8-A/SSE803Q.Seq.d/                       1061   0.0

Homology VSF727 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU265688) Dictyostelium discoideum vegetative cDNA clone:VS...  1011   0.0    2
(AU263945) Dictyostelium discoideum vegetative cDNA clone:VS...  1011   0.0    2
(AU060741) Dictyostelium discoideum slug cDNA, clone SLB315.     1011   0.0    2
(C94324) Dictyostelium discoideum slug cDNA, clone SSK837.       1011   0.0    2
(AU264543) Dictyostelium discoideum vegetative cDNA clone:VS...   819   0.0    3
(AU268853) Dictyostelium discoideum vegetative cDNA clone:VS...   987   0.0    2
(AU265755) Dictyostelium discoideum vegetative cDNA clone:VS...  1011   0.0    2
(AU033703) Dictyostelium discoideum slug cDNA, clone SLB335.     1011   0.0    2
(AU261506) Dictyostelium discoideum vegetative cDNA clone:VS...  1011   0.0    1
(AU033686) Dictyostelium discoideum slug cDNA, clone SLB315.     1005   0.0    1

Homology VSF727 vs Protein

Sequences producing significant alignments:                      (bits) Value


CR954216_234(CR954216|pid:none) Ostreococcus tauri strain OTTH05...    42   0.051
AX588489_1(AX588489|pid:none) Sequence 364 from Patent WO02083898.     38   0.74
T21694(T21694)hypothetical protein F33C8.1 - Caenorhabditis eleg...    37   1.3
(Q19981) RecName: Full=Putative protein tag-53; Flags: Precursor...    37   1.3
Z69790_3(Z69790|pid:none) Caenorhabditis elegans Cosmid F33C8, c...    37   1.3
AE014134_1453(AE014134|pid:none) Drosophila melanogaster chromos...    37   1.7
AL954359_1(AL954359|pid:none) Zebrafish DNA sequence from clone ...    36   2.2
BC051121_1(BC051121|pid:none) Mus musculus multiple EGF-like-dom...    36   2.8
CR388098_1(CR388098|pid:none) Zebrafish DNA sequence from clone ...    35   3.7
AF531101_1(AF531101|pid:none) Bos taurus attractin mRNA, complet...    35   6.3

Homology VSF727 vs Genome