Dictyostelium discoideum cDNA Clone VSC584

Sequence VSC584

ATCAGAGCAG GATTATTAAG AATAAAAAAA GCACAGCAAA CGAAAAAATT
AGCACTAAAA TTAAAATTAT TAGAAAGGGA TTTAGTCGAT GATATAAAAG
GAATCACAAG TAANTCAAAA AAATATATAG GAGTGGTAAA AAAAAACAAT
ATTAATAAAA GTCTTAATAA AAGTCTTAAG AAGTTTATTA AAAGCAAATA
TATTAACAAA AAAAGAAGCG AAAAGAAGAC GTAAAATAAA AGAGTTAATA
AAAATATTTT TATATCCATT ATTAATAACG AAAAGACAAA TACAAAAAGT
AAGATTAAGA AAAAAAAATA AAATATATTT ATTAATGGCT C

Translated Amino Acid Sequence VSC584

IRAGLLRIKKAQQTKKLALKLKLLERDLVDDIKGITSXSKKYIGVVKKNNINKSLNKSLK
KFIKSKYINKKRSEKKT*nkrvnknifisiinnektntkskikkkk*nifing

Homology VSC584 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSC584 (VSC584Q) /CSM/VS/VSC5-D/VSC584Q.Seq.d/                        268   5e-71
VSJ135 (VSJ135Q) /CSM/VS/VSJ1-B/VSJ135Q.Seq.d/                        258   5e-68
MIT-GENOME (MIT-GENOMEQ) /CSM/OTHERS/MIT-GENOMEQ.Seq.d/               258   5e-68
VSH546 (VSH546Q) /CSM/VS/VSH5-B/VSH546Q.Seq.d/                        200   1e-50
FC-IC1133 (FC-IC1133Q) /CSM/FC-IC/FC-IC1133Q.Seq.d/                   192   2e-48
VSG376 (VSG376Q) /CSM/VS/VSG3-D/VSG376Q.Seq.d/                        121   7e-27
SLG825 (SLG825Q) /CSM/SL/SLG8-B/SLG825Q.Seq.d/                        119   3e-26
VSA213 (VSA213Q) /CSM/VS/VSA2-A/VSA213Q.Seq.d/                        109   3e-23
VSF873 (VSF873Q) /CSM/VS/VSF8-D/VSF873Q.Seq.d/                         40   0.021
VFK518 (VFK518Q) /CSM/VF/VFK5-A/VFK518Q.Seq.d/                         40   0.021

Homology VSC584 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


D21196|D21196.1 Dictyostelium discoideum mitochondrial DNA.      165  e-104  6
AB000109|AB000109.1 Dictyostelium discoideum mitochondrial ...   165  e-101  6
AC124688|AC124688.1 Mus musculus chromosome UNK clone RP24-...    46  0.27  1
AC124570|AC124570.2 Mus musculus chromosome UNK clone RP23-...    46  0.27  1
BB331768|BB331768.1 Mus musculus 6 days neonate medulla obl...    46  0.27  1
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.          40  0.29  6
X95276|X95276.1 P.falciparum complete gene map of plastid-l...    32  0.32  4
AC138928|AC138928.1 Homo sapiens chromosome 5 clone RP11-67...    40  0.38  2
AL009030|AL009030.15 Human DNA sequence from clone RP1-28I2...    40  0.74  4
Z81116|Z81116.1 Caenorhabditis elegans cosmid T06C12.             34  1.0  6

Homology VSC584 vs Protein

Sequences producing significant alignments:                      (bits) Value


DQ336395_37(DQ336395|pid:none) Dictyostelium citrinum mitochondr...    55   4e-09
CP000962_194(CP000962|pid:none) Clostridium botulinum A3 str. Lo...    42   0.014
CP001083_198(CP001083|pid:none) Clostridium botulinum Ba4 str. 6...    41   0.018
AM412317_199(AM412317|pid:none) Clostridium botulinum A str. ATC...    39   0.069
CP001581_200(CP001581|pid:none) Clostridium botulinum A2 str. Ky...    39   0.12
CP002219_1025(CP002219|pid:none) Caldicellulosiruptor hydrotherm...    37   0.26
AM412317_1290(AM412317|pid:none) Clostridium botulinum A str. AT...    37   0.26
HM640930_9(HM640930|pid:none) Heterodera glycines mitochondrion,...    37   0.45
FN313571_11(FN313571|pid:none) Radopholus similis complete mitoc...    36   0.76
CP002161_83(CP002161|pid:none) Candidatus Zinderia insecticola C...    36   0.76

Homology VSC584 vs Genome