Dictyostelium discoideum cDNA Clone VSC180

Sequence VSC180

---------- GGTAAATGGA ATGATAAATT CATGTCATGT TTGGTTGGTT
CAAATGTTAG ATGTAACATT TGGGAGCATA ATGAAATTGA TACTCCAACT
CCAGGAAAAT TCCAAGAATT GGCTCAAGGC AGTACAAACA ATGATTTAAC
CTCAATAAAT GGTCTTTCAA AGTTCCAAGT CTTACCAGGA GCTTTTCAAT
GGGCAGTTGA TGTTAAAATT GTCAACAAAG TTAATTCAAC TGCTGGTTCA
TATGAAATGA CCATTACTCC ATACCAAGTT GATAAGGTTG CTTGCAAAGA
TGGTGATGAC TTTGTTCAAT TGCCAATTCC AAAACTTACT CCACCAGATT
CTGAAATTGT TAGCCATTTA ACAGTTCGTC AAACACATAC ACCATATGAC
TATGTTGTAA ATGGAAGTGT TTACTTTAAA TACTCCCCAA CAACTGGCCA
AGTTACAGTT ATTAAAAAAG ATGAGACATT CCCAAAGAAT ATGACTGTTA
CACAAGATGA TAATACATCT TTCATCTTTA ACTTAAACTC TGAAAAATAA
AACAATATGT TTTTTTTTCT CTTTAAGAAA ACTTTAAATA ATAAAATTAT
GAATTTCAGA AATTAAA

Translated Amino Acid Sequence VSC180

---KWNDKFMSCLVGSNVRCNIWEHNEIDTPTPGKFQELAQGSTNNDLTSINGLSKFQVL
PGAFQWAVDVKIVNKVNSTAGSYEMTITPYQVDKVACKDGDDFVQLPIPKLTPPDSEIVS
HLTVRQTHTPYDYVVNGSVYFKYSPTTGQVTVIKKDETFPKNMTVTQDDNTSFIFNLNSE
K*nnmffflfkktlnnkimnfrn*

Homology VSC180 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSC180 (VSC180Q) /CSM/VS/VSC1-D/VSC180Q.Seq.d/                       1150   0.0
SSM611 (SSM611Q) /CSM/SS/SSM6-A/SSM611Q.Seq.d/                       1146   0.0
SSK866 (SSK866Q) /CSM/SS/SSK8-C/SSK866Q.Seq.d/                       1146   0.0
SSK494 (SSK494Q) /CSM/SS/SSK4-D/SSK494Q.Seq.d/                       1146   0.0
SSI186 (SSI186Q) /CSM/SS/SSI1-D/SSI186Q.Seq.d/                       1146   0.0
SSG844 (SSG844Q) /CSM/SS/SSG8-B/SSG844Q.Seq.d/                       1146   0.0
SSF771 (SSF771Q) /CSM/SS/SSF7-C/SSF771Q.Seq.d/                       1146   0.0
SSF496 (SSF496Q) /CSM/SS/SSF4-D/SSF496Q.Seq.d/                       1146   0.0
SSC587 (SSC587Q) /CSM/SS/SSC5-D/SSC587Q.Seq.d/                       1146   0.0
SSF108 (SSF108Q) /CSM/SS/SSF1-A/SSF108Q.Seq.d/                       1144   0.0

Homology VSC180 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU262383) Dictyostelium discoideum vegetative cDNA clone:VS...  1084   0.0    2
(AU039039) Dictyostelium discoideum slug cDNA, clone SSM310.     1084   0.0    2
(C94392) Dictyostelium discoideum slug cDNA, clone SSK613.       1084   0.0    1
(C94348) Dictyostelium discoideum slug cDNA, clone SSK866.       1084   0.0    2
(C93312) Dictyostelium discoideum slug cDNA, clone SSM611.       1084   0.0    2
(C93031) Dictyostelium discoideum slug cDNA, clone SSF496.       1084   0.0    2
(C92980) Dictyostelium discoideum slug cDNA, clone SSF409.       1084   0.0    2
(C92931) Dictyostelium discoideum slug cDNA, clone SSF108.       1084   0.0    2
(C92927) Dictyostelium discoideum slug cDNA, clone SSF771.       1084   0.0    2
(C92519) Dictyostelium discoideum slug cDNA, clone SSE517.       1084   0.0    2

Homology VSC180 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P54657) RecName: Full=Calcium-dependent cell adhesion molecule ...   370   e-101
U20997_1(U20997|pid:none) Dictyostelium discoideum putative 25 k...   331   2e-89
AC116551_17(AC116551|pid:none) Dictyostelium discoideum chromoso...    95   3e-18
AJ575138_1(AJ575138|pid:none) Sordaria macrospora app gene for a...    59   1e-07
BX571864_113(BX571864|pid:none) Photorhabdus luminescens subsp. ...    54   4e-06
FN545234_29(FN545234|pid:none) Arsenophonus nasoniae whole genom...    43   0.012
CP001719_962(CP001719|pid:none) Methanobrevibacter ruminantium M...    39   0.14
FR874854_395(FR874854|pid:none) Lactobacillus pentosus IG1, anno...    34   4.4
(A4YIG5) RecName: Full=Cysteinyl-tRNA synthetase;          EC=6....    34   4.4
CU207366_3569(CU207366|pid:none) Gramella forsetii KT0803 comple...    34   5.7

Homology VSC180 vs Genome