Dictyostelium discoideum cDNA Clone VSB822

Sequence VSB822

CTATCCATTA ATAGGAAATT TTAAAAGTAG AGAGAAAAGA GGTTCAGTAT
TATTATTAAT AAAGCATGCA ATGTTTGAGG GAATGAGACA AGAAGCGACA
ATATTTGCAG AGTATTATAA TAAATATACA AGAATGTACA AGAGCTTTTT
AAAAGTAATG AAAAAAAGAG CAGAGAGAAA AACAAAACGG AAAAAAAGAC
AAAAAAGATA TTATAACATA AAATAGTTTA TTTTTTTCTT ATTATCATAT
AAAAAAATAA AAAATTTTAA AAGAAA

Translated Amino Acid Sequence VSB822

YPLIGNFKSREKRGSVLLLIKHAMFEGMRQEATIFAEYYNKYTRMYKSFLKVMKKRAERK
TKRKKRQKRYYNIK*fiffllsykkiknfkr

Homology VSB822 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSI523 (VSI523Q) /CSM/VS/VSI5-A/VSI523Q.Seq.d/                        317   5e-86
VSF893 (VSF893Q) /CSM/VS/VSF8-D/VSF893Q.Seq.d/                        317   5e-86
VSB822 (VSB822Q) /CSM/VS/VSB8-A/VSB822Q.Seq.d/                        317   5e-86
MIT-GENOME (MIT-GENOMEQ) /CSM/OTHERS/MIT-GENOMEQ.Seq.d/               303   7e-82
VSJ559 (VSJ559Q) /CSM/VS/VSJ5-C/VSJ559Q.Seq.d/                        297   4e-80
FC-IC1056 (FC-IC1056Q) /CSM/FC-IC/FC-IC1056Q.Seq.d/                   272   3e-72
VSG466 (VSG466Q) /CSM/VS/VSG4-C/VSG466Q.Seq.d/                        244   6e-64
AFN220 (AFN220Q) /CSM/AF/AFN2-A/AFN220Q.Seq.d/                         48   7e-05
FC-AE19 (FC-AE19Q) /CSM/FC/FC-AE/FC-AE19Q.Seq.d/                       38   0.067
VSK147 (VSK147Q) /CSM/VS/VSK1-B/VSK147Q.Seq.d/                         34   1.0

Homology VSB822 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AF155828|AF155828.1 Dictyostelium discoideum NADH dehydrogen...   317   4e-83  1
AB000109|AB000109.1 Dictyostelium discoideum mitochondrial D...   303   7e-79  1
AC006281|AC006281.8 Plasmodium falciparum chromosome 12 clon...    34   0.003  8
BZ394226|BZ394226.1 EINAC48TF EI_10_12_KB Entamoeba invadens...    36   0.009  3
BX511186|BX511186.2 Zebrafish DNA sequence *** SEQUENCING IN...    40   0.012  3
BX537111|BX537111.2 Zebrafish DNA sequence *** SEQUENCING IN...    36   0.015  6
AJ231525|AJ231525.1 Compsobraconoides sp. 3 28S rRNA gene.         50   0.016  1
AE014841|AE014841.1 Plasmodium falciparum 3D7 chromosome 11 ...    32   0.018  7
BX927203|BX927203.2 Zebrafish DNA sequence *** SEQUENCING IN...    36   0.018  6
L36897|L36897.1 Saccharomyces cerevisiae mitochondrion oxi3 ...    32   0.025  4

Homology VSB822 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q9XPI7) RecName: Full=Ribosomal protein S2, mitochondrial;     ...   106   5e-22
DQ336395_50(DQ336395|pid:none) Dictyostelium citrinum mitochondr...    80   5e-14
AY700145_28(AY700145|pid:none) Polysphondylium pallidum mitochon...    37   0.27
EU275726_46(EU275726|pid:none) Polysphondylium pallidum strain P...    35   1.0

Homology VSB822 vs Genome