Homology VSB822 vs DNA
Query= VSB822 (VSB822Q) /CSM/VS/VSB8-A/VSB822Q.Seq.d/
(276 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/a/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; ddbjrod9.seq; /db/DDBJNEW.DATA/a/new_ddbjrod.seq;
ddbjmam.seq; /db/DDBJNEW.DATA/a/new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; ddbjvrt3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrt.seq;
ddbjinv1.seq; ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/a/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/a/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
ddbjbct7.seq; /db/DDBJNEW.DATA/a/new_ddbjbct.seq; ddbjvrl1.seq;
ddbjvrl2.seq; ddbjvrl3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrl.seq;
ddbjphg.seq; /db/DDBJNEW.DATA/a/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/a/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss65.seq;
ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq; ddbjgss69.seq;
ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq; ddbjgss72.seq;
ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq; ddbjgss8.seq;
ddbjgss9.seq; /db/DDBJNEW.DATA/a/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss2.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg6.seq; ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhtg1.seq; ddbjpat1.seq; ddbjpat2.seq;
ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq; ddbjpat7.seq;
ddbjpat8.seq; ddbjpat9.seq; /db/DDBJNEW.DATA/a/new_ddbjpat.seq;
ddbjsts1.seq; ddbjsts2.seq; ddbjsts3.seq;
/db/DDBJNEW.DATA/a/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/a/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/a/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/a/new_est_btra1.seq; est_cele1.seq;
/db/DDBJNEW.DATA/a/new_est_cele1.seq; est_crei1.seq; est_cint1.seq;
/db/DDBJNEW.DATA/a/new_est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/a/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/a/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/a/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/a/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/a/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/a/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/a/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/a/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/a/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/a/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/a/new_est_rnor1.seq; est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/a/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/a/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/a/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; /db/DDBJNEW.DATA/a/new_est_rest1.seq
32,313,473 sequences; U,636,548,840 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AF155828|AF155828.1 Dictyostelium discoideum NADH dehydrogen... 317 4e-83 1
AB000109|AB000109.1 Dictyostelium discoideum mitochondrial D... 303 7e-79 1
AC006281|AC006281.8 Plasmodium falciparum chromosome 12 clon... 34 0.003 8
BZ394226|BZ394226.1 EINAC48TF EI_10_12_KB Entamoeba invadens... 36 0.009 3
BX511186|BX511186.2 Zebrafish DNA sequence *** SEQUENCING IN... 40 0.012 3
BX537111|BX537111.2 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.015 6
AJ231525|AJ231525.1 Compsobraconoides sp. 3 28S rRNA gene. 50 0.016 1
AE014841|AE014841.1 Plasmodium falciparum 3D7 chromosome 11 ... 32 0.018 7
BX927203|BX927203.2 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.018 6
L36897|L36897.1 Saccharomyces cerevisiae mitochondrion oxi3 ... 32 0.025 4
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma... 38 0.038 10
AE014828|AE014828.1 Plasmodium falciparum 3D7 chromosome 14 ... 36 0.043 8
AX344560|AX344560.1 Sequence 11 from Patent WO0200932. 36 0.054 8
AJ231512|AJ231512.1 Lapicida sp. 28S rRNA gene. 48 0.064 1
AJ296041|AJ296041.1 Simplicibracon sp. RDB-2000 partial 28S ... 48 0.064 1
AJ231513|AJ231513.1 Cratocnema sp. 28S rRNA gene. 48 0.064 1
AX392737|AX392737.1 Sequence 27 from Patent WO0212526. 30 0.071 5
AL356606|AL356606.10 Human DNA sequence *** SEQUENCING CANCE... 40 0.081 5
BX294375|BX294375.7 Zebrafish DNA sequence from clone DKEY-1... 32 0.11 7
AF250284|AF250284.1 Amsacta moorei entomopoxvirus, complete ... 34 0.13 8
AE014845|AE014845.1 Plasmodium falciparum 3D7 chromosome 12,... 34 0.13 7
AE014818|AE014818.1 Plasmodium falciparum 3D7 chromosome 14 ... 32 0.14 7
AC097629|AC097629.2 Sus scrofa clone RP44-265A21, WORKING DR... 34 0.18 4
AL954669|AL954669.8 Zebrafish DNA sequence from clone DKEY-8... 34 0.23 4
AC068711|AC068711.9 Homo sapiens chromosome 15 clone CTD-264... 36 0.24 6
AC115578|AC115578.2 Dictyostelium discoideum chromosome 2 ma... 32 0.25 4
BX005283|BX005283.6 Zebrafish DNA sequence from clone CH211-... 32 0.25 6
AX392733|AX392733.1 Sequence 23 from Patent WO0212526. 30 0.26 6
AL050403|AL050403.16 Human DNA sequence from clone RP4-697P8... 36 0.28 4
AE017008|AE017008.1 Bacillus cereus ATCC 14579 section 11 of... 38 0.30 7
BX511217|BX511217.4 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.30 5
BX296524|BX296524.3 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.30 5
BX649319|BX649319.8 Zebrafish DNA sequence from clone DKEYP-... 40 0.33 3
U17009|U17009.2 Phytophthora infestans mitochondrion, comple... 32 0.36 4
BX296546|BX296546.6 Zebrafish DNA sequence from clone CH211-... 34 0.38 6
AE014844|AE014844.1 Plasmodium falciparum 3D7 chromosome 12,... 34 0.40 7
AL109815|AL109815.2 Plasmodium falciparum DNA *** SEQUENCING... 40 0.42 5
X59280|X59280.1 S.douglasii gene for cytochrome b. 34 0.56 4
AL034557|AL034557.8 Plasmodium falciparum MAL4P1. 32 0.59 6
BX511269|BX511269.9 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.60 4
AZ525863|AZ525863.1 249PbA08 Pb MBN #21 Plasmodium berghei g... 30 0.61 3
AE014017|AE014017.1 Buchnera aphidicola str. Bp (Baizongia p... 34 0.65 8
AE014843|AE014843.1 Plasmodium falciparum 3D7 chromosome 11 ... 32 0.69 6
AE014847|AE014847.1 Plasmodium falciparum 3D7 chromosome 12,... 30 0.70 8
AL627310|AL627310.5 Human DNA sequence from clone RP11-199P2... 30 0.71 7
AJ511533|AJ511533.1 Candida glabrata complete mitochondrial ... 32 0.77 3
AJ011856|AJ011856.1 Saccharomyces cerevisiae complete mitoch... 32 0.81 4
BX571948|BX571948.8 Zebrafish DNA sequence from clone DKEY-1... 40 0.85 7
BX640459|BX640459.3 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.86 4
AL954696|AL954696.12 Zebrafish DNA sequence *** SEQUENCING I... 40 0.97 4
AC108211|AC108211.3 Homo sapiens BAC clone RP11-511I14 from ... 32 0.97 6
BX649249|BX649249.2 Zebrafish DNA sequence *** SEQUENCING IN... 34 0.98 3
BX927349|BX927349.3 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.98 5
AC101620|AC101620.1 Mus musculus clone RP23-199E4, LOW-PASS ... 36 0.98 2
AC013669|AC013669.2 Homo sapiens clone RP11-20H3, WORKING DR... 36 0.98 5
AJ296034|AJ296034.1 Bracon sp. indet 7 partial 28S rRNA gene. 44 0.99 1
BZ191070|BZ191070.1 CH230-464D18.TV CHORI-230 Segment 2 Ratt... 44 0.99 1
AJ302925|AJ302925.1 Syntomernus sp. RDB-2000 partial 28S rRN... 44 0.99 1
AJ296042|AJ296042.1 Syntomernus sp. RDB-2000 partial 28S rRN... 44 0.99 1
AJ231510|AJ231510.1 Bracon sp. 2 28S rRNA gene. 44 0.99 1
Z93639|Z93639.1 B.carbonarius 28S rRNA gene, D2 variable reg... 44 0.99 1
AJ296057|AJ296057.1 Calobracon bicolor partial 28S rRNA gene. 44 0.99 1
AC112849|AC112849.4 Rattus norvegicus clone CH230-319B5, WOR... 44 0.99 1
AC096488|AC096488.6 Rattus norvegicus clone CH230-110G15, WO... 44 0.99 1
BZ158799|BZ158799.1 CH230-289B9.TV CHORI-230 Segment 2 Rattu... 44 0.99 1
AJ296032|AJ296032.1 Bracon nigripedator partial 28S rRNA gene. 44 0.99 1
AJ296038|AJ296038.1 Lyricibracon sp. RDB-2000 partial 28S rR... 44 0.99 1
Z83604|Z83604.2 Bracon sp. indent 1 28S rRNA gene, D2 variab... 44 0.99 1
AJ296036|AJ296036.1 Bracon sp. indet 9 partial 28S rRNA gene. 44 0.99 1
AJ296035|AJ296035.1 Bracon sp. indet 8 partial 28S rRNA gene. 44 0.99 1
Z93659|Z93659.1 X.maculipes 28S rRNA gene, D2 variable region. 44 0.99 1
AC091312|AC091312.2 Mus musculus clone RP23-333N1, WORKING D... 44 0.99 1
Z93640|Z93640.1 B.haemorrhoeus 28S rRNA gene, D2 variable re... 44 0.99 1
AJ296056|AJ296056.1 Indabracon sp. RDB-2000 partial 28S rRNA... 44 0.99 1
AF345590|AF345590.1 Bracon sp. FD-2001 28S ribosomal RNA gen... 44 0.99 1
AF345589|AF345589.1 Bracon sp. FD-2001 28S ribosomal RNA gen... 44 0.99 1
AF345588|AF345588.1 Bracon sp. FD-2001 28S ribosomal RNA gen... 44 0.99 1
AF345617|AF345617.1 Bracon sp. FD-2001 28S ribosomal RNA gen... 44 0.99 1
AF345587|AF345587.1 Bracon sp. FD-2001 28S ribosomal RNA gen... 44 0.99 1
AL935294|AL935294.6 Zebrafish DNA sequence from clone CH211-... 36 1.0 6
AB063521|AB063521.2 Wigglesworthia glossinidia endosymbiont ... 40 1.1 10
AE014824|AE014824.1 Plasmodium falciparum 3D7 chromosome 14 ... 32 1.1 7
AE014849|AE014849.1 Plasmodium falciparum 3D7 chromosome 12,... 32 1.1 7
BX901955|BX901955.7 Zebrafish DNA sequence *** SEQUENCING IN... 32 1.1 5
AE014819|AE014819.1 Plasmodium falciparum 3D7 chromosome 14 ... 32 1.2 7
AE014842|AE014842.1 Plasmodium falciparum 3D7 chromosome 11 ... 32 1.2 7
AC009559|AC009559.8 Homo sapiens chromosome 15, clone RP11-2... 36 1.2 5
AC003691|AC003691.1 Human Chromosome 11q23 PAC clone pDJ254e... 36 1.3 4
BX649545|BX649545.3 Zebrafish DNA sequence *** SEQUENCING IN... 32 1.4 5
AL035456|AL035456.26 Human DNA sequence from clone RP5-1099D... 42 1.5 3
AC044840|AC044840.9 Homo sapiens chromosome , clone RP11-30L... 38 1.5 4
AL031678|AL031678.2 Human DNA sequence from clone RP4-816K17... 36 1.5 2
AL953903|AL953903.8 Zebrafish DNA sequence from clone CH211-... 40 1.5 4
AC109214|AC109214.6 Mus musculus chromosome 10, clone RP23-3... 34 1.6 5
AC005139|AC005139.3 Plasmodium falciparum chromosome 12, ***... 32 1.7 6
AL844152|AL844152.9 Zebrafish DNA sequence from clone DKEY-3... 36 1.7 5
AC096308|AC096308.7 Rattus norvegicus clone CH230-107L3, WOR... 34 1.7 5
Z80771|Z80771.1 Human DNA sequence from clone RP1-253J14 on ... 32 1.8 6
AC005507|AC005507.8 Plasmodium falciparum chromosome 12 clon... 32 1.8 6
BX511178|BX511178.6 Zebrafish DNA sequence from clone DKEY-2... 40 1.9 5
>AF155828|AF155828.1 Dictyostelium discoideum NADH dehydrogenase
subunit 5 (nad5) gene, complete cds; tRNA-Phe gene,
complete sequence; and ribosomal protein S4 (rps4) and
NADH dehydrogenase subunit 4L (nad4L) genes, complete
cds; mitochondrial genes for mitochondrial products.
Length = 4482
Score = 317 bits (160), Expect = 4e-83
Identities = 160/160 (100%)
Strand = Plus / Plus
Query: 1 ctatccattaataggaaattttaaaagtagagagaaaagaggttcagtattattattaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3808 ctatccattaataggaaattttaaaagtagagagaaaagaggttcagtattattattaat 3867
Query: 61 aaagcatgcaatgtttgagggaatgagacaagaagcgacaatatttgcagagtattataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3868 aaagcatgcaatgtttgagggaatgagacaagaagcgacaatatttgcagagtattataa 3927
Query: 121 taaatatacaagaatgtacaagagctttttaaaagtaatg 160
||||||||||||||||||||||||||||||||||||||||
Sbjct: 3928 taaatatacaagaatgtacaagagctttttaaaagtaatg 3967
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 9,418,190
Number of Sequences: 32313473
Number of extensions: 9418190
Number of successful extensions: 694885
Number of sequences better than 10.0: 631
length of query: 276
length of database: U,636,548,840
effective HSP length: 22
effective length of query: 254
effective length of database: T,925,652,434
effective search space: 9379115718236
effective search space used: 9379115718236
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home