Dictyostelium discoideum cDNA Clone VSB776

Sequence VSB776

AGTTAAATTT TAAGAAAATG CCTCACTCAT TCGGTCTCCG TGCTCGTACC
AGATACTTGT TCTCTCGTGG TTTCAGAAAC CATGGTCTCT TACAAACCAC
CACCTTCTTA AGAACTTTCC GTTTAGGTGA TTACGTTGAT ATCAAAGCCA
CCGGTAATGT ACACAAAGGT ATGCCACACA AATTNTACCA CGGTCGTACC
GGTCGTGTTT GGAATGTTAC TCCACGTGCT GTTGGTGTCA TCATCAACAA
ACGTGTTGGT CCAAGAATCA TTGCCAAGAA AATCCACGTC AGAACTGAAC
ACGTCAAACC ATCAAACTCC ATGGCTGCTC ACTTAAAACG TATCCAAGAA
AACAAAAAAG CTGTCGTTGA AGCCAAGAAA GCCGGTAAAT GGGTCGATGT
TAGACGTAAC CCAGCTGCAC CAAAGGACGG TTTCTTTGTC AACCCAAGAA
ACACTGAATT CGTTGAAGTC AAACCAGTCA AATACGAACT TTTATTATAA
ATTAATTTAA AAGAGTGGTG GCTAATATGG TTCAATCGCA ATCCTTTGAT
TATCCAAATT TGTNTTATTT AAAAAAGAAA AATAAAAAAA AATATAAAAA
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAA

Translated Amino Acid Sequence VSB776

LNFKKMPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHK
XYHGRTGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENKKA
VVEAKKAGKWVDVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELLL*inlkewwliwfnrn
pliiqicxi*krkikknikkkkkkkkkkkkkkk

Homology VSB776 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSB776 (VSB776Q) /CSM/VS/VSB7-D/VSB776Q.Seq.d/                       1118   0.0
VHK774 (VHK774Q) /CSM/VH/VHK7-D/VHK774Q.Seq.d/                       1118   0.0
VFL168 (VFL168Q) /CSM/VF/VFL1-C/VFL168Q.Seq.d/                       1118   0.0
VFJ214 (VFJ214Q) /CSM/VF/VFJ2-A/VFJ214Q.Seq.d/                       1118   0.0
VHH523 (VHH523Q) /CSM/VH/VHH5-A/VHH523Q.Seq.d/                       1110   0.0
FC-193 (FC-193Q) /CSM/CG/CG-FC/FC-193Q.Seq.d/                        1106   0.0
VSI403 (VSI403Q) /CSM/VS/VSI4-A/VSI403Q.Seq.d/                       1094   0.0
VSF754 (VSF754Q) /CSM/VS/VSF7-C/VSF754Q.Seq.d/                       1094   0.0
VSB311 (VSB311Q) /CSM/VS/VSB3-A/VSB311Q.Seq.d/                       1090   0.0
FC-BQ22 (FC-BQ22Q) /CSM/FC/FC-BQ/FC-BQ22Q.Seq.d/                     1090   0.0

Homology VSB776 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AL370150|AL370150.1 Medicago truncatula EST MtBA36A09F1 : T3...    90   5e-14  1
BE124671|BE124671.1 EST393706 GVN Medicago truncatula cDNA c...    90   5e-14  1
AJ502255|AJ502255.1 Medicago truncatula EST, clone mtgmadc12...    90   5e-14  1
AW573675|AW573675.1 EST316266 GVN Medicago truncatula cDNA c...    90   5e-14  1
BQ154523|BQ154523.1 NF073C12IR1F1098 Irradiated Medicago tru...    90   5e-14  1
BF634630|BF634630.1 NF064C11DT1F1085 Drought Medicago trunca...    90   5e-14  1
AW682908|AW682908.2 NF001G03LF1F1023 Developing leaf Medicag...    90   5e-14  1
AJ502274|AJ502274.1 Medicago truncatula EST, clone mtgmadc12...    90   5e-14  1
AW683430|AW683430.2 NF011H04LF1F1043 Developing leaf Medicag...    90   5e-14  1
AJ503169|AJ503169.1 Medicago truncatula EST, clone mtgmadc12...    90   5e-14  1

Homology VSB776 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54X53) RecName: Full=60S ribosomal protein L21;                     266   8e-70
FN357335_1(FN357335|pid:none) Schistosoma mansoni genome sequenc...   154   3e-36
AY813279_1(AY813279|pid:none) Schistosoma japonicum SJCHGC00639 ...   150   4e-35
GN110337_1(GN110337|pid:none) Sequence 15118 from Patent WO20090...   147   4e-34
GN110445_1(GN110445|pid:none) Sequence 15226 from Patent WO20090...   146   7e-34
AF475114_1(AF475114|pid:none) Triticum aestivum 60s ribosomal pr...   146   9e-34
AK354981_1(AK354981|pid:none) Hordeum vulgare subsp. vulgare mRN...   146   9e-34
GN110339_1(GN110339|pid:none) Sequence 15120 from Patent WO20090...   146   9e-34
GN110301_1(GN110301|pid:none) Sequence 15082 from Patent WO20090...   145   2e-33
GN110441_1(GN110441|pid:none) Sequence 15222 from Patent WO20090...   145   2e-33

Homology VSB776 vs Genome