Dictyostelium discoideum cDNA Clone VSB752

Sequence VSB752

GCTTAAATGA CAAATTTAAG GTTTAAGGGG AAAAGATAGG AGAAATAGAA
GAGAGTAGTA AGAGAAAAAT GTTTATAACG GATCTCTATG CAAATAAGAA
AAAGGACGTA CGAATGAACG AAAGGTTATA GGGAAAATAT AAAAAAGAGT
TAGCAATAGC AATTGAAGAT CTATAAATAT CCGAAGGGAG ACCAAGAAAA
AGAAGAAACG CAGTGAAGTG AAACATCTTA GTAACTGTAG GAAAAAAAAT
CAAAAGAGAT GCGGTAAGTA GTGGTGAGCG AAAGCCGAGG AGAGTAAAAG
TAGACCATTA GAAGAAAACT GAAGAAACTA GGTGGAAATC CAAGGCAGAA
TAAGGTGAAA GTCCAGTAAG GTAAGGGACT AATGGTAAAG AAGT

Translated Amino Acid Sequence VSB752

lk*qi*glrgkdrrnrre**eknvyngslck*ekgrtnerkvigki*krvsnsn*RSINI
RRETKKKKKRSEVKHLSNCRKKNQKRCGK*w*akaeesksrpleen*rn*veiqgrir*k
sskvrd*w*rs

Homology VSB752 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSB752 (VSB752Q) /CSM/VS/VSB7-C/VSB752Q.Seq.d/                        733   0.0
MIT-GENOME (MIT-GENOMEQ) /CSM/OTHERS/MIT-GENOMEQ.Seq.d/               733   0.0
SHC457 (SHC457Q) /CSM/SH/SHC4-C/SHC457Q.Seq.d/                        617   e-176
SHH465 (SHH465Q) /CSM/SH/SHH4-C/SHH465Q.Seq.d/                        603   e-172
VSD419 (VSD419Q) /CSM/VS/VSD4-A/VSD419Q.Seq.d/                        589   e-167
SLA839 (SLA839Q) /CSM/SL/SLA8-B/SLA839Q.Seq.d/                        569   e-161
SHG307 (SHG307Q) /CSM/SH/SHG3-A/SHG307Q.Seq.d/                        521   e-147
FC-IC0278 (FC-IC0278Q) /CSM/FC-IC/FC-IC0278Q.Seq.d/                   517   e-146
FC-IC0279 (FC-IC0279Q) /CSM/FC-IC/FC-IC0279Q.Seq.d/                   511   e-144
VSF886 (VSF886Q) /CSM/VS/VSF8-D/VSF886Q.Seq.d/                        482   e-135

Homology VSB752 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AB000109|AB000109.1 Dictyostelium discoideum mitochondrial D...   478   0.0    2
D16466|D16466.1 Dictyostelium discoideum mitochondrial DNA.       478   0.0    2
AJ512794|AJ512794.1 Dictyostelium discoideum mRNA for LIS1 p...   242   3e-60  1
AJ512336|AJ512336.1 Dictyostelium discoideum mRNA for LIS1 p...   242   3e-60  1
CD094942|CD094942.1 ME1-0002T-M098-C03-U.B ME1-0002 Schistos...    44   2e-06  2
CD094741|CD094741.1 ME1-0002G-M106-G03-U.G ME1-0002 Schistos...    44   2e-06  2
U02970|U02970.1 Prototheca wickerhamii 263-11 complete mitoc...    42   6e-06  2
X68722|X68722.1 P.wickerhamii mitochondrial gene for large r...    42   6e-06  2
D89861|D89861.1 Cyanidioschyzon merolae mitochondrial DNA, c...    44   3e-04  2
AF163136|AF163136.1 Actinomadura fibrosa 23S ribosomal RNA g...    44   3e-04  2

Homology VSB752 vs Protein

Sequences producing significant alignments:                      (bits) Value


AE010299_1578(AE010299|pid:none) Methanosarcina acetivorans str....    39   0.068
FN543107_180(FN543107|pid:none) Curvibacter putative symbiont of...    39   0.12
CP000930_2260(CP000930|pid:none) Heliobacterium modesticaldum Ic...    37   0.26
CP001229_1593(CP001229|pid:none) Sulfurihydrogenibium azorense A...    37   0.44
GU474869_40(GU474869|pid:none) Uncultured delta proteobacterium ...    36   0.58
GU474881_38(GU474881|pid:none) Uncultured Acidobacteriales bacte...    35   0.99
GU474883_37(GU474883|pid:none) Uncultured delta proteobacterium ...    34   2.2
GU474896_16(GU474896|pid:none) Uncultured Acidobacteria bacteriu...    34   2.9
CP002829_1424(CP002829|pid:none) Thermodesulfobacterium sp. OPB4...    34   2.9
CP001229_878(CP001229|pid:none) Sulfurihydrogenibium azorense Az...    33   3.7

Homology VSB752 vs Genome