Homology VSB311 vs Protein
Query= VSB311 (VSB311Q) /CSM/VS/VSB3-A/VSB311Q.Seq.d/
(598 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54X53) RecName: Full=60S ribosomal protein L21; 268 1e-70
FN357335_1(FN357335|pid:none) Schistosoma mansoni genome sequenc... 154 3e-36
AY813279_1(AY813279|pid:none) Schistosoma japonicum SJCHGC00639 ... 150 4e-35
GN110337_1(GN110337|pid:none) Sequence 15118 from Patent WO20090... 150 5e-35
GN110445_1(GN110445|pid:none) Sequence 15226 from Patent WO20090... 149 9e-35
AF475114_1(AF475114|pid:none) Triticum aestivum 60s ribosomal pr... 149 1e-34
AK354981_1(AK354981|pid:none) Hordeum vulgare subsp. vulgare mRN... 149 1e-34
GN110339_1(GN110339|pid:none) Sequence 15120 from Patent WO20090... 149 1e-34
GN110301_1(GN110301|pid:none) Sequence 15082 from Patent WO20090... 147 3e-34
GN110441_1(GN110441|pid:none) Sequence 15222 from Patent WO20090... 147 3e-34
GN110311_1(GN110311|pid:none) Sequence 15092 from Patent WO20090... 147 3e-34
EF146128_1(EF146128|pid:none) Populus trichocarpa clone WS0115_L... 147 3e-34
GN110443_1(GN110443|pid:none) Sequence 15224 from Patent WO20090... 147 3e-34
HM138481_1(HM138481|pid:none) Triticum aestivum 60S ribosomal pr... 147 4e-34
GN110341_1(GN110341|pid:none) Sequence 15122 from Patent WO20090... 147 4e-34
GN110309_1(GN110309|pid:none) Sequence 15090 from Patent WO20090... 147 4e-34
GN110295_1(GN110295|pid:none) Sequence 15076 from Patent WO20090... 146 8e-34
GN110439_1(GN110439|pid:none) Sequence 15220 from Patent WO20090... 146 8e-34
GN110293_1(GN110293|pid:none) Sequence 15074 from Patent WO20090... 146 8e-34
CS559802_1(CS559802|pid:none) Sequence 389 from Patent WO2006032... 145 1e-33
GU982551_1(GU982551|pid:none) Epinephelus coioides 60S ribosomal... 144 3e-33
CS560048_1(CS560048|pid:none) Sequence 635 from Patent WO2006032... 144 3e-33
CS560034_1(CS560034|pid:none) Sequence 621 from Patent WO2006032... 144 3e-33
GN110455_1(GN110455|pid:none) Sequence 15236 from Patent WO20090... 144 3e-33
HM138480_1(HM138480|pid:none) Triticum aestivum 60S ribosomal pr... 144 4e-33
BT034854_1(BT034854|pid:none) Zea mays full-length cDNA clone ZM... 144 4e-33
GN110465_1(GN110465|pid:none) Sequence 15246 from Patent WO20090... 143 5e-33
AM478155_1(AM478155|pid:none) Vitis vinifera contig VV78X028183.... 143 5e-33
EU959301_1(EU959301|pid:none) Zea mays clone 214730 60S ribosoma... 143 5e-33
CS559818_1(CS559818|pid:none) Sequence 405 from Patent WO2006032... 143 5e-33
GN110451_1(GN110451|pid:none) Sequence 15232 from Patent WO20090... 143 5e-33
CS559894_1(CS559894|pid:none) Sequence 481 from Patent WO2006032... 143 5e-33
BT090673_1(BT090673|pid:none) Soybean clone JCVI-FLGm-5G3 unknow... 143 6e-33
AM425744_4(AM425744|pid:none) Vitis vinifera contig VV78X269838.... 143 6e-33
AY357070_1(AY357070|pid:none) Hippocampus comes 60S ribosomal pr... 143 6e-33
GN110315_1(GN110315|pid:none) Sequence 15096 from Patent WO20090... 143 6e-33
GN110447_1(GN110447|pid:none) Sequence 15228 from Patent WO20090... 142 8e-33
(Q9FDZ9) RecName: Full=60S ribosomal protein L21-2; &AC079732_2... 142 8e-33
AC022457_4(AC022457|pid:none) Oryza sativa chromosome 10 BAC OSJ... 142 8e-33
(O42706) RecName: Full=60S ribosomal protein L21-B; &AL357232_9... 142 1e-32
AM428974_4(AM428974|pid:none) Vitis vinifera contig VV78X085822.... 142 1e-32
EU968998_1(EU968998|pid:none) Zea mays clone 325464 60S ribosoma... 142 1e-32
BC071354_1(BC071354|pid:none) Danio rerio ribosomal protein L21,... 142 1e-32
DQ207854_1(DQ207854|pid:none) Solanum tuberosum clone 076C12 unk... 141 2e-32
FJ429207_1(FJ429207|pid:none) Lepidochitona cinerea ribosomal pr... 141 2e-32
BT062461_1(BT062461|pid:none) Zea mays full-length cDNA clone ZM... 141 2e-32
AF401575_1(AF401575|pid:none) Ictalurus punctatus ribosomal prot... 141 2e-32
EU960831_1(EU960831|pid:none) Zea mays clone 228936 60S ribosoma... 141 2e-32
EU976390_1(EU976390|pid:none) Zea mays clone 881893 60S ribosoma... 141 2e-32
FJ972626_1(FJ972626|pid:none) Lycoris radiata 60s ribosomal prot... 141 2e-32
AM980978_1(AM980978|pid:none) Echinorhynchus truttae partial mRN... 140 3e-32
BT073470_1(BT073470|pid:none) Oncorhynchus mykiss clone omyk-evn... 140 3e-32
BT086055_1(BT086055|pid:none) Zea mays full-length cDNA clone ZM... 140 5e-32
EU957934_1(EU957934|pid:none) Zea mays clone 1634246 60S ribosom... 139 7e-32
AB374957_1(AB374957|pid:none) Solea senegalensis RPL21 mRNA for ... 139 7e-32
BC096572_1(BC096572|pid:none) Mus musculus ribosomal protein L21... 139 1e-31
AK002940_1(AK002940|pid:none) Mus musculus adult male brain cDNA... 139 1e-31
(P46778) RecName: Full=60S ribosomal protein L21; &AB061826_1(A... 138 2e-31
AB010901_1(AB010901|pid:none) Schizosaccharomyces pombe mRNA for... 137 3e-31
FQ857219_3(FQ857219|pid:none) Piriformospora indica PIRI_contig_... 137 3e-31
CP001160_581(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 137 3e-31
(Q6QN05) RecName: Full=60S ribosomal protein L21; &AY533214_1(A... 137 4e-31
BT089333_1(BT089333|pid:none) Soybean clone JCVI-FLGm-1P5 unknow... 136 6e-31
AM849523_1(AM849523|pid:none) Pomphorhynchus laevis partial mRNA... 136 8e-31
(O09167) RecName: Full=60S ribosomal protein L21; &U93863_1(U93... 136 8e-31
DQ213783_1(DQ213783|pid:none) Taeniopygia guttata clone 0064P001... 136 8e-31
CP001141_118(CP001141|pid:none) Phaeodactylum tricornutum CCAP 1... 135 1e-30
EZ406192_1(EZ406192|pid:none) TSA: Rhipicephalus sanguineus RS-7... 135 1e-30
L38826_1(L38826|pid:none) Homo sapiens L21 ribosomal protein gen... 135 1e-30
BC073305_1(BC073305|pid:none) Xenopus laevis MGC80700 protein, m... 135 2e-30
FQ311442_255(FQ311442|pid:none) Sporisorium reilianum SRZ2 chrom... 135 2e-30
EF633921_1(EF633921|pid:none) Ornithodoros parkeri clone OP-472 ... 134 3e-30
BT071465_1(BT071465|pid:none) Picea sitchensis clone WS02914_K12... 134 4e-30
AM920435_275(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 133 7e-30
EF134335_1(EF134335|pid:none) Oxyrrhis marina isolate Om-5p-15-2... 133 7e-30
BT071279_1(BT071279|pid:none) Picea sitchensis clone WS02818_C06... 133 7e-30
FN357335_2(FN357335|pid:none) Schistosoma mansoni genome sequenc... 132 9e-30
(O82574) RecName: Full=60S ribosomal protein L21; &AF092950_1(A... 132 1e-29
BX538351_59(BX538351|pid:none) Cryptosporidium parvum chromosome... 131 2e-29
DQ066307_1(DQ066307|pid:none) Ixodes scapularis isolate IS-6-12L... 131 2e-29
GU588378_1(GU588378|pid:none) Ictalurus furcatus clone CBZF3983 ... 131 2e-29
CP003002_1911(CP003002|pid:none) Myceliophthora thermophila ATCC... 131 2e-29
JO840868_1(JO840868|pid:none) TSA: Amblyomma maculatum Am-64102 ... 131 3e-29
EU124970_1(EU124970|pid:none) Arenicola marina ribosomal protein... 131 3e-29
FN322624_1(FN322624|pid:none) Schistosoma japonicum isolate Anhu... 131 3e-29
FN322626_1(FN322626|pid:none) Schistosoma japonicum isolate Anhu... 131 3e-29
CR382125_1027(CR382125|pid:none) Kluyveromyces lactis strain NRR... 131 3e-29
GN110327_1(GN110327|pid:none) Sequence 15108 from Patent WO20090... 130 4e-29
EU558368_1(EU558368|pid:none) Phoronis muelleri putative 60S rib... 130 4e-29
AE017345_226(AE017345|pid:none) Cryptococcus neoformans var. neo... 130 6e-29
CP000290_221(CP000290|pid:none) Cryptococcus gattii WM276 chromo... 129 7e-29
U25789_1(U25789|pid:none) Human ribosomal protein L21 mRNA, comp... 129 7e-29
HC507439_1(HC507439|pid:none) Sequence 2509 from Patent WO201003... 129 7e-29
GN110325_1(GN110325|pid:none) Sequence 15106 from Patent WO20090... 129 1e-28
CP003010_180(CP003010|pid:none) Thielavia terrestris NRRL 8126 c... 129 1e-28
DQ440060_1(DQ440060|pid:none) Aedes aegypti clone AE-315 60S rib... 129 1e-28
AK340153_1(AK340153|pid:none) Acyrthosiphon pisum ACYPI006688 mR... 128 2e-28
HE612864_173(HE612864|pid:none) Tetrapisispora phaffii CBS 4417 ... 127 3e-28
(Q02753) RecName: Full=60S ribosomal protein L21-A; &FN393060_2... 127 4e-28
(Q12672) RecName: Full=60S ribosomal protein L21-B; &FN394217_1... 127 4e-28
AY961492_1(AY961492|pid:none) Lysiphlebus testaceipes ribosomal ... 127 5e-28
HE612867_160(HE612867|pid:none) Tetrapisispora phaffii CBS 4417 ... 126 6e-28
EZ423740_1(EZ423740|pid:none) TSA: Glossina morsitans morsitans ... 126 6e-28
HE580271_268(HE580271|pid:none) Naumovozyma dairenensis CBS 421 ... 126 8e-28
FR823393_266(FR823393|pid:none) Neospora caninum Liverpool compl... 126 8e-28
EF070445_1(EF070445|pid:none) Maconellicoccus hirsutus clone WHM... 126 8e-28
GN110361_1(GN110361|pid:none) Sequence 15142 from Patent WO20090... 125 1e-27
AF400187_1(AF400187|pid:none) Spodoptera frugiperda ribosomal pr... 125 1e-27
HE601627_862(HE601627|pid:none) Schistosoma mansoni strain Puert... 125 1e-27
CP002503_43(CP002503|pid:none) Eremothecium cymbalariae DBVPG#72... 125 1e-27
CR940348_861(CR940348|pid:none) Theileria annulata strain Ankara... 125 1e-27
DQ363668_1(DQ363668|pid:none) Streblomastix strix RPL21 (rpl21) ... 124 2e-27
CR382132_232(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 124 4e-27
GN110343_1(GN110343|pid:none) Sequence 15124 from Patent WO20090... 123 7e-27
EU116858_1(EU116858|pid:none) Sipunculus nudus putative ribosoma... 123 7e-27
AB180424_1(AB180424|pid:none) Plutella xylostella mRNA for Ribos... 122 9e-27
GN110371_1(GN110371|pid:none) Sequence 15152 from Patent WO20090... 122 1e-26
AY857434_1(AY857434|pid:none) Suberites domuncula L21 mRNA, comp... 122 2e-26
AY829790_1(AY829790|pid:none) Lonomia obliqua ribosomal protein ... 121 2e-26
AY232061_1(AY232061|pid:none) Drosophila yakuba clone yak-ad_CG1... 121 2e-26
EU116903_1(EU116903|pid:none) Barentsia elongata putative riboso... 121 3e-26
GN110299_1(GN110299|pid:none) Sequence 15080 from Patent WO20090... 121 3e-26
GN110373_1(GN110373|pid:none) Sequence 15154 from Patent WO20090... 120 4e-26
AB098978_1(AB098978|pid:none) Bos taurus mRNA for similar to rib... 120 6e-26
HE605206_1120(HE605206|pid:none) Candida parapsilosis strain CDC... 119 8e-26
DQ387872_7(DQ387872|pid:none) Neurospora crassa strain Adiopodou... 119 1e-25
CR382134_215(CR382134|pid:none) Debaryomyces hansenii strain CBS... 118 2e-25
AB098754_1(AB098754|pid:none) Bos taurus mRNA for similar to rib... 118 2e-25
AY752828_1(AY752828|pid:none) Culicoides sonorensis clone CsRPL2... 118 2e-25
GN110355_1(GN110355|pid:none) Sequence 15136 from Patent WO20090... 117 3e-25
FM992689_348(FM992689|pid:none) Candida dubliniensis CD36 chromo... 117 3e-25
GN110329_1(GN110329|pid:none) Sequence 15110 from Patent WO20090... 117 5e-25
GU120444_1(GU120444|pid:none) Chrysomela tremulae ribosomal prot... 116 6e-25
AY292616_1(AY292616|pid:none) Oikopleura dioica 60S ribosomal pr... 115 1e-24
FJ384973_1(FJ384973|pid:none) Bombina orientalis ribosomal prote... 115 1e-24
AM494953_48(AM494953|pid:none) Leishmania braziliensis chromosom... 115 1e-24
HE573020_82(HE573020|pid:none) Trypanosoma vivax Y486 annotated ... 114 2e-24
(P38653) RecName: Full=60S ribosomal protein L21; &X73634_1(X73... 114 4e-24
CT005255_47(CT005255|pid:none) Leishmania major strain Friedlin ... 114 4e-24
AM502234_47(AM502234|pid:none) Leishmania infantum chromosome 16... 113 7e-24
GN110289_1(GN110289|pid:none) Sequence 15070 from Patent WO20090... 113 7e-24
CT005271_380(CT005271|pid:none) Leishmania major strain Friedlin... 112 9e-24
HM193202_1(HM193202|pid:none) Endocarpon pusillum clone 09-2920 ... 112 1e-23
BT127987_1(BT127987|pid:none) Dendroctonus ponderosae clone DPO1... 112 1e-23
HE580269_545(HE580269|pid:none) Naumovozyma dairenensis CBS 421 ... 111 2e-23
CP001333_157(CP001333|pid:none) Micromonas sp. RCC299 chromosome... 111 2e-23
BT078025_1(BT078025|pid:none) Lepeophtheirus salmonis Pacific fo... 111 2e-23
CU928169_540(CU928169|pid:none) Kluyveromyces thermotolerans str... 111 3e-23
AM910995_245(AM910995|pid:none) Plasmodium knowlesi strain H chr... 111 3e-23
EZ114826_1(EZ114826|pid:none) TSA: Ochlerotatus triseriatus OT-2... 110 4e-23
CU928173_549(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 109 1e-22
FP929125_189(FP929125|pid:none) Leptosphaeria maculans JN3 lm_Su... 108 1e-22
CP000883_71(CP000883|pid:none) Hemiselmis andersenii chromosome ... 107 4e-22
GU373016_1(GU373016|pid:none) Amphidinium carterae strain CCMP13... 105 1e-21
BT036491_1(BT036491|pid:none) Zea mays full-length cDNA clone ZM... 103 4e-21
AY231806_1(AY231806|pid:none) Drosophila yakuba clone yak-em_CG1... 103 6e-21
BT046890_1(BT046890|pid:none) Salmo salar clone ssal-rgb-537-167... 103 7e-21
AY909407_1(AY909407|pid:none) Siniperca chuatsi clone C370 ribos... 102 1e-20
Z21487_1(Z21487|pid:none) S.cerevisiae RIM, MSI1, PGI, and ribos... 99 1e-19
BT084588_1(BT084588|pid:none) Zea mays full-length cDNA clone ZM... 99 2e-19
DQ864827_1(DQ864827|pid:none) Pfiesteria piscicida clone ppi-5p-... 97 7e-19
CP001946_90(CP001946|pid:none) Encephalitozoon intestinalis ATCC... 96 1e-18
GU372987_1(GU372987|pid:none) Karlodinium veneficum strain CCMP2... 94 3e-18
(Q8SRW8) RecName: Full=60S ribosomal protein L21; &AL590445_93(... 94 6e-18
FP565838_1(FP565838|pid:none) Brachiola algerae, 60S RIBOSOMAL P... 93 8e-18
AM049067_1(AM049067|pid:none) Mycetophagus quadripustulatus part... 88 2e-16
BT034949_1(BT034949|pid:none) Zea mays full-length cDNA clone ZM... 84 4e-15
CP002174_49(CP002174|pid:none) Cryptomonas paramecium strain CCA... 84 4e-15
BT081228_1(BT081228|pid:none) Caligus clemensi clone ccle-evs-50... 81 3e-14
HE573027_52(HE573027|pid:none) Trypanosoma vivax Y486 annotated ... 81 3e-14
DQ009554_1(DQ009554|pid:none) Cronartium ribicola ribosomal prot... 74 6e-12
(P49666) RecName: Full=60S ribosomal protein L21; Flags: Fragment; 65 2e-09
EU966569_1(EU966569|pid:none) Zea mays clone 295339 unknown mRNA. 64 7e-09
AY714821_22(AY714821|pid:none) Uncultured archaeon GZfos17A3 clo... 58 4e-07
AY714873_36(AY714873|pid:none) Uncultured archaeon GZfos9E5 clon... 57 5e-07
AY714830_31(AY714830|pid:none) Uncultured archaeon GZfos19C7 clo... 57 5e-07
(Q975F2) RecName: Full=50S ribosomal protein L21e; &BA000023_51... 57 8e-07
CP002098_1002(CP002098|pid:none) Ignisphaera aggregans DSM 17230... 56 1e-06
CP001939_29(CP001939|pid:none) Thermosphaera aggregans DSM 11486... 55 2e-06
CP002051_21(CP002051|pid:none) Staphylothermus hellenicus DSM 12... 54 7e-06
BC057822_1(BC057822|pid:none) Homo sapiens ribosomal protein L21... 53 1e-05
CP002838_167(CP002838|pid:none) Pyrolobus fumarii 1A, complete g... 52 1e-05
(Q4JB11) RecName: Full=50S ribosomal protein L21e; &CP000077_58... 52 2e-05
(Q8TUU3) RecName: Full=50S ribosomal protein L21e; &AE009439_16... 52 2e-05
CP001787_1524(CP001787|pid:none) Methanocaldococcus vulcanius M7... 51 4e-05
CP002117_1828(CP002117|pid:none) Methanoplanus petrolearius DSM ... 51 4e-05
(A3CWY7) RecName: Full=50S ribosomal protein L21e; &CP000562_19... 51 4e-05
CP001696_550(CP001696|pid:none) Methanocaldococcus fervens AG86,... 50 6e-05
CP000493_1593(CP000493|pid:none) Hyperthermus butylicus DSM 5456... 50 6e-05
CP001901_919(CP001901|pid:none) Methanocaldococcus sp. FS406-22,... 50 6e-05
(A7I9H8) RecName: Full=50S ribosomal protein L21e; &CP000780_18... 49 1e-04
CP002057_1441(CP002057|pid:none) Methanococcus voltae A3, comple... 48 3e-04
(Q0W2E9) RecName: Full=50S ribosomal protein L21e; &AM114193_80... 47 5e-04
CP002772_2246(CP002772|pid:none) Methanobacterium sp. SWAN-1, co... 47 5e-04
AP011532_723(AP011532|pid:none) Methanocella paludicola SANAE DN... 47 5e-04
CP002009_1062(CP002009|pid:none) Methanocaldococcus infernus ME,... 47 6e-04
(A0B7V4) RecName: Full=50S ribosomal protein L21e; &CP000477_97... 47 8e-04
CP002588_371(CP002588|pid:none) Archaeoglobus veneficus SNP6, co... 47 8e-04
(A6VI82) RecName: Full=50S ribosomal protein L21e; &(A9A8J8) Re... 47 8e-04
(A4G096) RecName: Full=50S ribosomal protein L21e; &CP000609_15... 46 0.001
(Q2FS99) RecName: Full=50S ribosomal protein L21e; &CP000254_29... 46 0.001
(C3NEB3) RecName: Full=50S ribosomal protein L21e; &CP001403_13... 46 0.001
(C3MQ30) RecName: Full=50S ribosomal protein L21e; &(C3MVE8) Re... 46 0.001
(Q2NE44) RecName: Full=50S ribosomal protein L21e; &CP000102_14... 46 0.001
AC007654_15(AC007654|pid:none) Genomic sequence for Arabidopsis ... 45 0.002
CP002792_942(CP002792|pid:none) Methanothermococcus okinawensis ... 45 0.002
CP001710_1666(CP001710|pid:none) Methanothermobacter marburgensi... 45 0.003
CP000505_354(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 44 0.004
CP000866_1380(CP000866|pid:none) Nitrosopumilus maritimus SCM1, ... 43 0.012
(A6UT27) RecName: Full=50S ribosomal protein L21e; &CP000743_56... 42 0.016
(A5UN04) RecName: Full=50S ribosomal protein L21e; &CP000678_13... 42 0.020
CP002101_1245(CP002101|pid:none) Methanosalsum zhilinae DSM 4017... 42 0.026
(O27378) RecName: Full=50S ribosomal protein L21e; &AE000666_12... 41 0.035
(Q8U217) RecName: Full=50S ribosomal protein L21e; &AE009950_10... 41 0.035
CP002670_1778(CP002670|pid:none) Pyrococcus sp. NA2, complete ge... 41 0.045
(Q12XH4) RecName: Full=50S ribosomal protein L21e; &CP000300_82... 41 0.045
EU016653_35(EU016653|pid:none) Uncultured Group I marine crenarc... 40 0.059
EU016600_22(EU016600|pid:none) Uncultured Group I marine crenarc... 40 0.059
(A2STS6) RecName: Full=50S ribosomal protein L21e; &CP000559_15... 40 0.077
(B1L7A8) RecName: Full=50S ribosomal protein L21e; &CP000968_15... 39 0.13
(C5A597) RecName: Full=50S ribosomal protein L21e; &CP001398_90... 39 0.13
(A4YCT6) RecName: Full=50S ribosomal protein L21e; &CP000682_61... 39 0.13
CP002656_1986(CP002656|pid:none) Metallosphaera cuprina Ar-4, co... 39 0.17
CP000855_408(CP000855|pid:none) Thermococcus onnurineus NA1, com... 39 0.17
(Q8PU21) RecName: Full=50S ribosomal protein L21e; &AE008384_25... 39 0.22
CP001719_162(CP001719|pid:none) Methanobrevibacter ruminantium M... 38 0.29
FN869859_2015(FN869859|pid:none) Thermoproteus tenax Kra 1, comp... 38 0.29
CP002069_1540(CP002069|pid:none) Methanohalobium evestigatum Z-7... 38 0.38
(Q9UZP1) RecName: Full=50S ribosomal protein L21e; &AJ248286_16... 37 0.50
(O28743) RecName: Full=50S ribosomal protein L21e; &AE000782_15... 35 1.9
AP011830_35(AP011830|pid:none) Candidatus Caldiarchaeum subterra... 35 1.9
(A4WLN2) RecName: Full=50S ribosomal protein L21e; &CP000660_16... 35 3.2
(Q8ZTB5) RecName: Full=50S ribosomal protein L21e; &AE009441_23... 35 3.2
EU850441_2(EU850441|pid:none) Philodina roseola dihydrogenpyrimi... 34 4.2
CP002590_1358(CP002590|pid:none) Thermoproteus uzoniensis 768-20... 34 5.5
CP001463_598(CP001463|pid:none) Thermococcus sibiricus MM 739, c... 33 7.2
AP012032_3240(AP012032|pid:none) Pantoea ananatis AJ13355 DNA, c... 33 9.3
CP001875_79(CP001875|pid:none) Pantoea ananatis LMG 20103, compl... 33 9.3
BT095994_1(BT095994|pid:none) Soybean clone JCVI-FLGm-20O7 unkno... 33 9.4
>(Q54X53) RecName: Full=60S ribosomal protein L21;
Length = 160
Score = 268 bits (686), Expect = 1e-70
Identities = 133/160 (83%), Positives = 133/160 (83%)
Frame = +1
Query: 4 MPHSFGLRARTRYLFSRGFRNHGXXXXXXXXXXXXXGDYVDIKATGNVHKGMPHKFYHGR 183
MPHSFGLRARTRYLFSRGFRNHG GDYVDIKATGNVHKGMPHKFYHGR
Sbjct: 1 MPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGR 60
Query: 184 TGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENXXXXXXXX 363
TGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQEN
Sbjct: 61 TGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENKKAVVEAK 120
Query: 364 XXXXXXDVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELLL 483
DVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELLL
Sbjct: 121 KAGKWVDVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELLL 160
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,698,605,698
Number of extensions: 34998400
Number of successful extensions: 98576
Number of sequences better than 10.0: 239
Number of HSP's gapped: 98477
Number of HSP's successfully gapped: 240
Length of query: 199
Length of database: 1,732,582,204
Length adjustment: 125
Effective length of query: 74
Effective length of database: 1,063,930,579
Effective search space: 78730862846
Effective search space used: 78730862846
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
Dictyostelium discoideum cDNA Project Home