<List of Series> <Series: VSB3-A> <Clone: VSB311> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone VSB311
Dictyostelium discoideum cDNA Project Home
Sequence VSB311
AAAATGCCTC ACTCATTCGG TCTCCGTGCT CGTACCAGAT ACTTGTTCTC
TCGTGGTTTC AGAAACCATG GTCTCTTACA AACCACCACC TTCTTAAGAA
CTTTCCGTTT AGGTGATTAC GTTGATATCA AAGCCACCGG TAATGTACAC
AAAGGTATGC CACACAAATT CTACCACGGT CGTACCGGTC GTGTTTGGAA
TGTTACTCCA CGTGCTGTTG GTGTCATCAT CAACAAACGT GTTGGTCCAA
GAATCATTGC CAAGAAAATC CACGTCAGAA CTGAACACGT CAAACCATCA
AACTCCATGG CTGCTCACTT AAAACGTATC CAAGAAAACA AAAAAGCTGT
CGTTGAAGCC AAGAAAGCCG GTAAATGGGT CGATGTTAGA CGTAACCCAG
CTGCACCAAA GGACGGTTTC TTTGTCAACC CAAGAAACAC TGAATTCGTT
GAAGTCAAAC CAGTCAAATA CGAACTTTTA TTATAAATTA ATTTAAAAGA
GTGGTGGCTA ATATGGTTCA ATCGCAATCC TTTGATTATC CAAATTTGTC
TTATTTAAAA AAGAAAAATA AAAAAAAATA TAAAAAAAAA AAAATATA
Translated Amino Acid Sequence VSB311
<All Frames>
KMPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHG
RTGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENKKAVVEA
KKAGKWVDVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELLL*inlkewwliwfnrnplii
qicli*krkikknikkkky
Homology VSB311 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
VSF754 (VSF754Q) /CSM/VS/VSF7-C/VSF754Q.Seq.d/ 1102 0.0
VSB311 (VSB311Q) /CSM/VS/VSB3-A/VSB311Q.Seq.d/ 1102 0.0
VHK774 (VHK774Q) /CSM/VH/VHK7-D/VHK774Q.Seq.d/ 1102 0.0
VHH523 (VHH523Q) /CSM/VH/VHH5-A/VHH523Q.Seq.d/ 1102 0.0
VFL168 (VFL168Q) /CSM/VF/VFL1-C/VFL168Q.Seq.d/ 1102 0.0
VFJ214 (VFJ214Q) /CSM/VF/VFJ2-A/VFJ214Q.Seq.d/ 1102 0.0
FC-193 (FC-193Q) /CSM/CG/CG-FC/FC-193Q.Seq.d/ 1102 0.0
VSA718 (VSA718Q) /CSM/VS/VSA7-A/VSA718Q.Seq.d/ 1100 0.0
VSA693 (VSA693Q) /CSM/VS/VSA6-D/VSA693Q.Seq.d/ 1092 0.0
FC-AK10 (FC-AK10Q) /CSM/FC/FC-AK/FC-AK10Q.Seq.d/ 1092 0.0
Homology VSB311 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
BG581474|BG581474.1 EST483208 GVN Medicago truncatula cDNA c... 96 7e-16 1
BM814865|BM814865.1 EST592959 BNIR Medicago truncatula/Meloi... 96 7e-16 1
AL377750|AL377750.1 Medicago truncatula EST MtBB33F07R1 : T7... 96 7e-16 1
AJ498414|AJ498414.1 Medicago truncatula EST, clone mt--acc95... 96 7e-16 1
AJ504294|AJ504294.1 Medicago truncatula EST, clone mtgmadc12... 96 7e-16 1
AJ503169|AJ503169.1 Medicago truncatula EST, clone mtgmadc12... 96 7e-16 1
AL375658|AL375658.1 Medicago truncatula EST MtBB16B07F1 : T3... 96 7e-16 1
BF004370|BF004370.1 EST432868 KV1 Medicago truncatula cDNA c... 96 7e-16 1
BG587858|BG587858.1 EST489633 KV3 Medicago truncatula cDNA c... 96 7e-16 1
BI308681|BI308681.1 EST530091 GPOD Medicago truncatula cDNA ... 96 7e-16 1
Homology VSB311 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(Q54X53) RecName: Full=60S ribosomal protein L21; 268 1e-70
FN357335_1(FN357335|pid:none) Schistosoma mansoni genome sequenc... 154 3e-36
AY813279_1(AY813279|pid:none) Schistosoma japonicum SJCHGC00639 ... 150 4e-35
GN110337_1(GN110337|pid:none) Sequence 15118 from Patent WO20090... 150 5e-35
GN110445_1(GN110445|pid:none) Sequence 15226 from Patent WO20090... 149 9e-35
AF475114_1(AF475114|pid:none) Triticum aestivum 60s ribosomal pr... 149 1e-34
AK354981_1(AK354981|pid:none) Hordeum vulgare subsp. vulgare mRN... 149 1e-34
GN110339_1(GN110339|pid:none) Sequence 15120 from Patent WO20090... 149 1e-34
GN110301_1(GN110301|pid:none) Sequence 15082 from Patent WO20090... 147 3e-34
GN110441_1(GN110441|pid:none) Sequence 15222 from Patent WO20090... 147 3e-34
Homology VSB311 vs Genome
<more Genome info>
<List of Series> <Series: VSB3-A> <Clone: VSB311> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home