Dictyostelium discoideum cDNA Clone VHP536

Sequence VHP536

AATTAATTTT ATTTTAATAT AAAACTCATA ATTTTATATA TAAAATAAAA
AAATAAAATA AAAATGAACA AAGAAGAATA TTCAGATATT TCAGACTCTG
AATCAGAGGA AGTTCATGAA ACAAACAATC ATAATGAACA CGAACACGAA
GAAGAAGATG ACACACCAGA AATTGTTGTA CCAGAACGTA AATTCTTAAA
AGAAGATGAA GATTATTCAG TTCCATTCCC AGTCATGCGT GAATGTTTGG
TCCTTTTGTT GCAATCAAGA AGAATCTTAA GAGATATGAT GTATTATAGA
TTCAAAATGG ATAGATTCCT TTCTGGTAAT CTCTCTGTAT TTGAAATTCA
AAATCTATTA CATTCACAAA GAGAAGATAA AGAATCTGAT TGGATTGCTG
AAATTCAAGA ATTAAAACGT AATTTAGTTA GTGAAGTTAG AAGAAATCAT
ACATTAGAAA GAGATCTTAA TCGTCTTGAT AAGAGAATTG CACTTTTAAT
TAAAAATCGT GGTAATATTC AAGATGTATT AGCAGACAAA GCTGGTCTTA
AAGCACCAAA ACATAAGGGA GATCAAAAG- ---------T CGTGCTCTTC
CAACTCTTCC AGAACAAAAA GACCAATCTG ATGAACCACC CAATCTTGTC
GATGTTTTAA ACAAGGCTCG TCAAGCTGAA CCATCTTTGG AGCCAGAAAT
CAAAAAGATC CTTGATAACC TCAAAAAACT TGAAGAATAT AATCTCACCA
CCTCTGCCGA TAATTATTCC TCTTTCCTCA AGGCAGTCGC ACTCGAAGTA
GTTAATCGTG CTGAAATTCG TGAACAACAA AAGAAGGAGA AACAAAGATT
AACCACCTCT TTGAATAATC TTCGTAAACA TCAAAAATAT CTCAACGAAC
AAATCGCTCA ATACAATCAA TACCTCCAAG ATTGTCGTCT CAAACATTAT
CAAAACAAGA GCAAAAAGAA GAAGAAGGGA GATGGTGCCA AAGTTGGTCC
TTTCAAATTC AGTTTCAGCG AACTTCACAA GAAAGGTGTC ATCGTCGACT
CTGAAGTTCC TCAAATCACC AGAAAGAAGA TTAAATTTGT CATTAGCTCT
GATACCGTTG GTGTGTTTGA TGTCTCTGCT AAAATGGCTG GTATCGATGT
TCAAACTATG CGTTTGGAAC TTGATGACCT TTTAGAACTC AATTCAATTG
GCACCACAAC TTTAGAATTA GATCAAATCA CTTTAGATGT TAATATGACC
ATACATTTAT TAAACAAACT TTTCTTATAT TAGTCAACTT AATAAATAAA
AAATAAATAA AAAAATATTG TGTATTAAAG AATAAAAAA

Translated Amino Acid Sequence VHP536

n*fyfnikliilyik*KNKIKMNKEEYSDISDSESEEVHETNNHNEHEHEEEDDTPEIVV
PERKFLKEDEDYSVPFPVMRECLVLLLQSRRILRDMMYYRFKMDRFLSGNLSVFEIQNLL
HSQREDKESDWIAEIQELKRNLVSEVRRNHTLERDLNRLDKRIALLIKNRGNIQDVLADK
AGLKAPKHKGDQK---

---RALPTLPEQKDQSDEPPNLVDVLNKARQAEPSLEPEIKKILDNLKKLEEYNLTTSAD
NYSSFLKAVALEVVNRAEIREQQKKEKQRLTTSLNNLRKHQKYLNEQIAQYNQYLQDCRL
KHYQNKSKKKKKGDGAKVGPFKFSFSELHKKGVIVDSEVPQITRKKIKFVISSDTVGVFD
VSAKMAGIDVQTMRLELDDLLELNSIGTTTLELDQITLDVNMTIHLLNKLFLY*st**ik
nk*knivy*rik

Homology VHP536 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHP536 (VHP536Q) /CSM/VH/VHP5-B/VHP536Q.Seq.d/                       2369   0.0
CHM205 (CHM205Q) /CSM/CH/CHM2-A/CHM205Q.Seq.d/                       1380   0.0
AHN241 (AHN241Q) /CSM/AH/AHN2-B/AHN241Q.Seq.d/                       1380   0.0
AHB795 (AHB795Q) /CSM/AH/AHB7-D/AHB795Q.Seq.d/                       1380   0.0
SHL120 (SHL120Q) /CSM/SH/SHL1-A/SHL120Q.Seq.d/                       1378   0.0
SHK836 (SHK836Q) /CSM/SH/SHK8-B/SHK836Q.Seq.d/                       1370   0.0
AHE179 (AHE179Q) /CSM/AH/AHE1-D/AHE179Q.Seq.d/                       1368   0.0
SHA237 (SHA237Q) /CSM/SH/SHA2-B/SHA237Q.Seq.d/                       1366   0.0
AHL870 (AHL870Q) /CSM/AH/AHL8-C/AHL870Q.Seq.d/                       1366   0.0
AHE493 (AHE493Q) /CSM/AH/AHE4-D/AHE493Q.Seq.d/                       1364   0.0

Homology VHP536 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ446308) Dictyostelium discoideum cDNA clone:ddv62g09, 3' ...  1388   0.0    1
(U81156) Dictyostelium discoideum RasGAP1 (rgaA) gene, compl...  1380   0.0    1
(L75794) Dictyostelium discoideum RasGTPase-activating prote...  1380   0.0    1
(BJ382859) Dictyostelium discoideum cDNA clone:ddc46i02, 3' ...  1380   0.0    1
(BJ355482) Dictyostelium discoideum cDNA clone:dda57a12, 3' ...  1380   0.0    1
(BJ348965) Dictyostelium discoideum cDNA clone:dda34n23, 3' ...  1380   0.0    1
(BJ408515) Dictyostelium discoideum cDNA clone:dds46g05, 3' ...  1378   0.0    1
(BJ408292) Dictyostelium discoideum cDNA clone:dds45h10, 3' ...  1370   0.0    1
(BJ350453) Dictyostelium discoideum cDNA clone:dda39m19, 3' ...  1368   0.0    1
(BJ350443) Dictyostelium discoideum cDNA clone:dda39j24, 3' ...  1364   0.0    1

Homology VHP536 vs Protein

Sequences producing significant alignments:                      (bits) Value


U81156_1(U81156|pid:none) Dictyostelium discoideum RasGAP1 (rgaA...   402   e-110
(Q54K32) RecName: Full=Ras GTPase-activating-like protein rgaA; ...   402   e-110
AK302981_1(AK302981|pid:none) Homo sapiens cDNA FLJ52376 complet...   102   5e-20
AK303054_1(AK303054|pid:none) Homo sapiens cDNA FLJ50398 complet...   102   5e-20
U51903_1(U51903|pid:none) Human RasGAP-related protein (IQGAP2) ...   102   5e-20
AY351902_1(AY351902|pid:none) Homo sapiens testis specific IQ mo...   102   5e-20
BT072767_1(BT072767|pid:none) Salmo salar clone ssal-rgf-539-307...    99   5e-19
AB076897_1(AB076897|pid:none) Ciona intestinalis Ci-IQGAP mRNA f...    99   7e-19
FQ311441_131(FQ311441|pid:none) Sporisorium reilianum SRZ2 chrom...    96   3e-18
BC150958_1(BC150958|pid:none) Mus musculus IQ motif containing G...    94   2e-17

Homology VHP536 vs Genome