Dictyostelium discoideum cDNA Clone VHP502

Sequence VHP502

AGAATTTGAA TATCTCACGT TATGCAAAGA TTTTCAAAAA GAATCCAGTC
GTACCATTGT ATGGTGATAT GCAAATCACA TTGGAATCAT TGGTTAAGAG
ATCACCACAT TTCGATGAGA AGGCATGGGG TACCTCAACA TTGGATAGTA
AATCAGCGTT GGATTACGAG ATCATTCATG TTTTGGACCA AACACGTTCC
CTCTACAACG AGTATATGGC ACGTTTTGCA AATATGGTCA ACGAGATTAG
AGCGGCCAAA GCTCGTGGTC CAAAGGAACC ATTGCCATTG GCAGAGTCTG
ATATTCAAGC AATCACATTG ATGGGTTTGA GGATTCTCTC TGATTGGACC
TCAAGAGTAC TTCAACAATC GGCTTGGAAA TATTCTAAAC CAAACAATGA
TCCAACCATT TCAGCAACCT TTGATTATGA ACGTGTCGTT AAATTCAATT
ATACCAAAGA GGAGAGAACC GCTTTGGTTC AATTGATCGC CATGATCAAA
TCATTGGCTT CATTGATGAT GAAGAGTGAA ACATTACTTC AACCAATACT
TCGTAAGACC ATTCATCAAG AGTTGCAAGA GTTTGTTCAA ATCAATCTCA
AAGAGACCAT TAAATCCTTT GTAAAGAATA ---------- TCTTTAAGAG
TGTCCTCCAA CGTTTCTCTT CAATCCTTAA TATTGTTCGT CATGATTGGT
CTGGTGCTCC TCCAGATAAT GGTGTCATTT GCGTTGATTC CTCAACAGAG
TTTTATCGTT TATGGAGTGC CCTTCAATTT GTAATCTGTT GGCCACTCTC
AAATGAAAAT GATAAATCTT TCCATGAATT GTTTGGTGAT GGTTTAATGT
GGGCCGGTTG TTCATTGATC CATTTCCTTG GTCAACAATA TCGTTTCGAA
TTATTTGATT TCTGTTATCA CATTTTAAAT GTAGAAGAGG CTGCTGCTGT
TCGTTCAGAT AAACCTGCCT TAAAGAATTT CTTTAAGAAT GCTCAAATCA
TCAAAGATAT CAATAATCAA ATCTTTAGTA TACTCAATAC ATATTGTCCA
CCACCACCAC CTTCTAATAT GATCCTTTCA CCACCTGCTA CTGAACAAGC
TGAACAATTT ATAGTTACAA CCACTGTTGA AGAACAATCA ATTCAACAAC
AACAACAACA ACAACAACAA CAACAACTTC AACAATCAAC TTCAAATTCT
GGAAGTAGTT TATCACTTTC TGCTGCTGGT GCACCACCTC CACCACCACC
ACCATCAAC

Translated Amino Acid Sequence VHP502

NLNISRYAKIFKKNPVVPLYGDMQITLESLVKRSPHFDEKAWGTSTLDSKSALDYEIIHV
LDQTRSLYNEYMARFANMVNEIRAAKARGPKEPLPLAESDIQAITLMGLRILSDWTSRVL
QQSAWKYSKPNNDPTISATFDYERVVKFNYTKEERTALVQLIAMIKSLASLMMKSETLLQ
PILRKTIHQELQEFVQINLKETIKSFVKN---

---FKSVLQRFSSILNIVRHDWSGAPPDNGVICVDSSTEFYRLWSALQFVICWPLSNEND
KSFHELFGDGLMWAGCSLIHFLGQQYRFELFDFCYHILNVEEAAAVRSDKPALKNFFKNA
QIIKDINNQIFSILNTYCPPPPPSNMILSPPATEQAEQFIVTTTVEEQSIQQQQQQQQQQ
QLQQSTSNSGSSLSLSAAGAPPPPPPPS

Homology VHP502 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHP502 (VHP502Q) /CSM/VH/VHP5-A/VHP502Q.Seq.d/                       2206   0.0
VHE283 (VHE283Q) /CSM/VH/VHE2-D/VHE283Q.Seq.d/                       1211   0.0
VHG686 (VHG686Q) /CSM/VH/VHG6-D/VHG686Q.Seq.d/                       1185   0.0
SHI756 (SHI756Q) /CSM/SH/SHI7-C/SHI756Q.Seq.d/                       1134   0.0
SHI590 (SHI590Q) /CSM/SH/SHI5-D/SHI590Q.Seq.d/                       1108   0.0
AFH509 (AFH509Q) /CSM/AF/AFH5-A/AFH509Q.Seq.d/                        989   0.0
VHJ827 (VHJ827Q) /CSM/VH/VHJ8-B/VHJ827Q.Seq.d/                        971   0.0
AHK356 (AHK356Q) /CSM/AH/AHK3-C/AHK356Q.Seq.d/                        948   0.0
AFB604 (AFB604Q) /CSM/AF/AFB6-A/AFB604Q.Seq.d/                        946   0.0
AHJ856 (AHJ856Q) /CSM/AH/AHJ8-C/AHJ856Q.Seq.d/                        940   0.0

Homology VHP502 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ427307) Dictyostelium discoideum cDNA clone:ddv62c01, 5' ...  1249   0.0    1
(AY368270) Dictyostelium discoideum Rac-binding component of...  1241   0.0    1
(BJ420597) Dictyostelium discoideum cDNA clone:ddv39e22, 5' ...  1211   0.0    1
(BJ422111) Dictyostelium discoideum cDNA clone:ddv44k22, 5' ...  1185   0.0    1
(BJ396191) Dictyostelium discoideum cDNA clone:dds41p13, 5' ...  1134   0.0    1
(BJ396205) Dictyostelium discoideum cDNA clone:dds41c23, 5' ...  1108   0.0    1
(BJ446210) Dictyostelium discoideum cDNA clone:ddv62c01, 3' ...   975   0.0    2
(BJ343402) Dictyostelium discoideum cDNA clone:dda16a03, 3' ...   967   0.0    2
(BJ439224) Dictyostelium discoideum cDNA clone:ddv39e22, 3' ...   955   0.0    2
(BJ442574) Dictyostelium discoideum cDNA clone:ddv50f08, 3' ...   950   0.0    2

Homology VHP502 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q6UK63) RecName: Full=Protein pirA;  &AY368270_1(AY368270|pid:n...   410   e-113
AY122203_1(AY122203|pid:none) Drosophila melanogaster LD47929 fu...   142   5e-32
(Q299G2) RecName: Full=Cytoplasmic FMR1-interacting protein; Alt...   142   5e-32
BT011115_1(BT011115|pid:none) Drosophila melanogaster LD19991 fu...   142   5e-32
(Q9VF87) RecName: Full=Cytoplasmic FMR1-interacting protein; Alt...   142   5e-32
T32647(T32647)hypothetical protein F56A11.1 - Caenorhabditis ele...   124   9e-27
(Q7L576) RecName: Full=Cytoplasmic FMR1-interacting protein 1; A...   124   1e-26
D38549_1(D38549|pid:none) Homo sapiens KIAA0068 mRNA, partial cds.    124   1e-26
AY687629_1(AY687629|pid:none) Aplysia californica cytoplasmic fr...   123   2e-26
AK146613_1(AK146613|pid:none) Mus musculus 17 days pregnant adul...   123   3e-26

Homology VHP502 vs Genome