Homology VHP309 vs DNA
Query= VHP309 (VHP309Q) /CSM/VH/VHP3-A/VHP309Q.Seq.d/
(844 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(J01284) Slime mold (D.discoideum) discoidin-Ic gene, comple... 1568 0.0 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 1568 0.0 1
(BJ437639) Dictyostelium discoideum cDNA clone:ddv34k23, 3' ... 1538 0.0 1
(BJ445903) Dictyostelium discoideum cDNA clone:ddv61b03, 3' ... 1507 0.0 1
(AU284623) Dictyostelium discoideum gamete cDNA clone:FC-BF0... 1261 0.0 1
(J01282) Slime mold (D.discoideum) discoidin-ia gene. 1243 0.0 1
(BJ427014) Dictyostelium discoideum cDNA clone:ddv61b03, 5' ... 1164 0.0 1
(AU284688) Dictyostelium discoideum gamete cDNA clone:FC-BH1... 1134 0.0 1
(BJ431982) Dictyostelium discoideum cDNA clone:ddv17a11, 3' ... 1104 0.0 1
(BJ421126) Dictyostelium discoideum cDNA clone:ddv41e21, 5' ... 1096 0.0 1
(AU265107) Dictyostelium discoideum vegetative cDNA clone:VS... 1065 0.0 3
(BJ440735) Dictyostelium discoideum cDNA clone:ddv44g14, 3' ... 1065 0.0 1
(BJ429347) Dictyostelium discoideum cDNA clone:ddv3m06, 3' e... 1063 0.0 2
(BJ422021) Dictyostelium discoideum cDNA clone:ddv44g14, 5' ... 1053 0.0 1
(AU265106) Dictyostelium discoideum vegetative cDNA clone:VS... 1045 0.0 1
(BJ419056) Dictyostelium discoideum cDNA clone:ddv34k23, 5' ... 1031 0.0 1
(AU284398) Dictyostelium discoideum gamete cDNA clone:FC-AS0... 1017 0.0 1
(BJ444105) Dictyostelium discoideum cDNA clone:ddv55b10, 3' ... 955 0.0 3
(BJ440099) Dictyostelium discoideum cDNA clone:ddv42j17, 3' ... 979 0.0 1
(J01283) Slime mold (D.discoideum) discoidin-Ib gene, partia... 882 0.0 1
(J01285) Slime mold (D.discoideum) discoidin-Id gene, 5' end. 819 0.0 1
(BJ411147) Dictyostelium discoideum cDNA clone:ddv3m06, 5' e... 791 0.0 2
(AU262075) Dictyostelium discoideum vegetative cDNA clone:VS... 646 0.0 1
(AU262074) Dictyostelium discoideum vegetative cDNA clone:VS... 646 0.0 1
(J01281) Slime mold (D.discoideum) discoidin-i(5.6) gene, 3'... 569 e-163 2
(AU034052) Dictyostelium discoideum slug cDNA, clone SLB855. 569 e-158 1
(AU271878) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 488 e-133 1
(AU271877) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 488 e-133 1
(AU275155) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 462 e-125 1
(AU275156) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 404 e-119 2
(AU271856) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 440 e-119 1
(AU271855) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 440 e-119 1
(AU263708) Dictyostelium discoideum vegetative cDNA clone:VS... 355 2e-93 1
(AU262429) Dictyostelium discoideum vegetative cDNA clone:VS... 355 2e-93 1
(AU263709) Dictyostelium discoideum vegetative cDNA clone:VS... 264 1e-79 2
(AU272425) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 301 2e-77 1
(AU272424) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 301 2e-77 1
(AU267849) Dictyostelium discoideum vegetative cDNA clone:VS... 299 9e-77 1
(AU267850) Dictyostelium discoideum vegetative cDNA clone:VS... 145 8e-73 4
(AU264418) Dictyostelium discoideum vegetative cDNA clone:VS... 258 3e-64 1
(X00327) Dictyostelim discoideum discoidin I pseudogene frag... 194 4e-45 1
(BJ440100) Dictyostelium discoideum cDNA clone:ddv42j18, 3' ... 176 9e-40 1
(AB120175) Dictyostelium discoideum DD7-1 mRNA for hypotheti... 78 7e-36 7
(BJ435231) Dictyostelium discoideum cDNA clone:ddv26b15, 3' ... 78 2e-32 6
(BJ428303) Dictyostelium discoideum cDNA clone:ddv11o08, 3' ... 78 2e-26 5
(BJ441295) Dictyostelium discoideum cDNA clone:ddv46d08, 3' ... 78 2e-26 5
(AU269330) Dictyostelium discoideum vegetative cDNA clone:VS... 78 8e-25 5
(C93905) Dictyostelium discoideum slug cDNA, clone SSL850. 78 1e-22 5
(BJ430601) Dictyostelium discoideum cDNA clone:ddv7l20, 3' e... 78 3e-21 4
(AU265835) Dictyostelium discoideum vegetative cDNA clone:VS... 78 3e-21 4
(AU264986) Dictyostelium discoideum vegetative cDNA clone:VS... 78 9e-21 4
(AU263260) Dictyostelium discoideum vegetative cDNA clone:VS... 78 1e-20 5
(AU262451) Dictyostelium discoideum vegetative cDNA clone:VS... 84 2e-19 3
(AU262343) Dictyostelium discoideum vegetative cDNA clone:VS... 78 1e-17 4
(AU263202) Dictyostelium discoideum vegetative cDNA clone:VS... 78 1e-17 3
(AU261596) Dictyostelium discoideum vegetative cDNA clone:VS... 78 1e-17 3
(AU261873) Dictyostelium discoideum vegetative cDNA clone:VS... 78 1e-17 3
(AU267789) Dictyostelium discoideum vegetative cDNA clone:VS... 78 1e-17 3
(BJ427963) Dictyostelium discoideum cDNA clone:ddv10a12, 3' ... 78 1e-17 3
(X00326) Dictyostelium dicoideum discoidin I beta gene upstr... 80 2e-10 1
(D29628) Dictyostelium discoideum mRNA for discoidin II, com... 68 6e-07 1
(C93013) Dictyostelium discoideum slug cDNA, clone SSF475. 68 6e-07 1
(C92919) Dictyostelium discoideum slug cDNA, clone SSF761. 68 6e-07 1
(BJ442642) Dictyostelium discoideum cDNA clone:ddv50d15, 3' ... 68 6e-07 1
(BJ436226) Dictyostelium discoideum cDNA clone:ddv30p09, 3' ... 68 6e-07 1
(BJ432454) Dictyostelium discoideum cDNA clone:ddv18a23, 3' ... 68 6e-07 1
(BJ431088) Dictyostelium discoideum cDNA clone:ddv9g22, 3' e... 68 6e-07 1
(BJ420939) Dictyostelium discoideum cDNA clone:ddv40m24, 5' ... 68 6e-07 1
(BJ414315) Dictyostelium discoideum cDNA clone:ddv18a23, 5' ... 68 6e-07 1
(BJ352479) Dictyostelium discoideum cDNA clone:dda46k22, 3' ... 68 6e-07 1
(BJ417395) Dictyostelium discoideum cDNA clone:ddv30p09, 5' ... 62 4e-05 1
(BJ412779) Dictyostelium discoideum cDNA clone:ddv9g22, 5' e... 62 4e-05 1
(AU263819) Dictyostelium discoideum vegetative cDNA clone:VS... 38 0.029 2
(AP000903) Homo sapiens genomic DNA, chromosome 11q clone:RP... 48 0.54 1
(AL512594) Human DNA sequence from clone RP11-549A6 on chrom... 48 0.54 1
(AP003968) Homo sapiens genomic DNA, chromosome 11q clone:RP... 48 0.54 1
(AL590712) Human DNA sequence *** SEQUENCING CANCELLED *** f... 48 0.54 1
(AL391558) Human DNA sequence *** SEQUENCING CANCELLED *** f... 48 0.54 1
(AC024287) Homo sapiens clone RP11-22O5, WORKING DRAFT SEQUE... 48 0.54 1
(AC019123) Homo sapiens chromosome 11 clone RP11-545G16, WOR... 48 0.54 1
(AC011154) Homo sapiens clone RP11-7K8, WORKING DRAFT SEQUEN... 48 0.54 1
(CL137357) ISB1-109G6_T7.1 ISB1 Xenopus (Silurana) tropicali... 48 0.54 1
(AC102860) Mus musculus chromosome 3, clone RP24-511H12, com... 46 2.1 1
(EK320707) 1095462428414 Global-Ocean-Sampling_GS-31-01-01-1... 46 2.1 1
(EJ772192) 1092970404165 Global-Ocean-Sampling_GS-30-02-01-1... 46 2.1 1
(AC159122) Bos taurus clone CH240-6E8, WORKING DRAFT SEQUENC... 44 4.6 2
(BX848603) RZPD Xenopus laevis cDNA clone IMAGp998H1010584 =... 40 5.7 2
(AM427317) Vitis vinifera contig VV78X246644.14, whole genom... 38 8.4 4
(CT573269) CH251-10A4, complete sequence. 44 8.4 1
(CU179665) Pig DNA sequence from clone CH242-231M2 on chromo... 44 8.4 1
(AC151646) Dasypus novemcinctus clone VMRC5-242D2, WORKING D... 44 8.4 1
(AC113762) Rattus norvegicus clone CH230-89K14, *** SEQUENCI... 44 8.4 1
(AC108178) Felis catus clone RP86-113N11, WORKING DRAFT SEQU... 44 8.4 1
(AL844506) Plasmodium falciparum chromosome 7. 44 8.4 1
(AC221243) Bos taurus clone CH240-400J1, WORKING DRAFT SEQUE... 44 8.4 1
(AY812472) Schistosoma japonicum SJCHGC03957 protein mRNA, p... 44 8.4 1
(ER297331) 1092343657615 Global-Ocean-Sampling_GS-34-01-01-1... 44 8.4 1
(EK556959) 1095518002267 Global-Ocean-Sampling_GS-32-01-01-1... 44 8.4 1
(EK550152) 1095516113106 Global-Ocean-Sampling_GS-32-01-01-1... 44 8.4 1
(EK186866) 1095460001488 Global-Ocean-Sampling_GS-31-01-01-1... 44 8.4 1
>(J01284) Slime mold (D.discoideum) discoidin-Ic gene, complete cds.
Length = 1081
Score = 1568 bits (791), Expect = 0.0
Identities = 791/791 (100%)
Strand = Plus / Plus
Query: 54 gtctacccaaggtttagttcaacttatctcaaatgctcaatgtcatttaagaacctcaac 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gtctacccaaggtttagttcaacttatctcaaatgctcaatgtcatttaagaacctcaac 257
Query: 114 caattacaatgatgtccacactcaatttaatgctgttttaaactataaaaacaaaggtac 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 caattacaatgatgtccacactcaatttaatgctgttttaaactataaaaacaaaggtac 317
Query: 174 caatactattgatggttcagaagcttggtgttcatcaatcgtagataccaaccaatacat 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 caatactattgatggttcagaagcttggtgttcatcaatcgtagataccaaccaatacat 377
Query: 234 tgttgctggttgtgaagttccacgtacttttatgtgtgttgctctccaaggtcgtggtga 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgttgctggttgtgaagttccacgtacttttatgtgtgttgctctccaaggtcgtggtga 437
Query: 294 tcatgatcaatgggttacatcatacaaaatccgttattcattagataatgttacctggtc 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcatgatcaatgggttacatcatacaaaatccgttattcattagataatgttacctggtc 497
Query: 354 tgaatatcgtaatggtgctgctattactggtgtaactgatcgtaacactgttgttaatca 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgaatatcgtaatggtgctgctattactggtgtaactgatcgtaacactgttgttaatca 557
Query: 414 tttctttgatactccaattagagctcgttcaattgctatccacccattaacctggaataa 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tttctttgatactccaattagagctcgttcaattgctatccacccattaacctggaataa 617
Query: 474 ccacatttcattaagatgtgaattctacactcaaccagtacaaagctcagtcactcaagt 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ccacatttcattaagatgtgaattctacactcaaccagtacaaagctcagtcactcaagt 677
Query: 534 tggtgcagatatttacactggcgataactgtgccttaaataccggttcaggtaaacgtga 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tggtgcagatatttacactggcgataactgtgccttaaataccggttcaggtaaacgtga 737
Query: 594 agttgttgtcccagttaaattccaatttgaatttgctactctcccaaaggttgccctcaa 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 agttgttgtcccagttaaattccaatttgaatttgctactctcccaaaggttgccctcaa 797
Query: 654 ctttgatcaaatcgattgtactgatgctaccaatcaaactcgtattggtgttcaaccaag 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ctttgatcaaatcgattgtactgatgctaccaatcaaactcgtattggtgttcaaccaag 857
Query: 714 aaacattaccaccaaaggtttcgattgtgttttctacacttggaatgctaacaaagtcta 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 aaacattaccaccaaaggtttcgattgtgttttctacacttggaatgctaacaaagtcta 917
Query: 774 ttcattaagagctgattacattgctactgctttagaataaatttttaatcttattattaa 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 ttcattaagagctgattacattgctactgctttagaataaatttttaatcttattattaa 977
Query: 834 aattgtaattt 844
|||||||||||
Sbjct: 978 aattgtaattt 988
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 805,837,625
Number of extensions: 43560078
Number of successful extensions: 3313614
Number of sequences better than 10.0: 129
Length of query: 844
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 820
Effective length of database: 97,308,875,965
Effective search space: 79793278291300
Effective search space used: 79793278291300
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home