Dictyostelium discoideum cDNA Clone VHP236

Sequence VHP236

AATTCAGTAG TTCAATTTAA TTTATAATAA TAATAATAGT ATAAATATAT
AAAGATTAAT TTTTTTGTAT ATAAATTCTT GTAAATAAAT AAATAAATAA
TAATTTTTTT TTTAATTCAC ACACATACAT ATAAATATTA AATAATTAAA
TATTAAAAAA TGTCATCAAT TGGTATTGAT TTAGGTACAA CATATTCATG
TGTTGGTGTT TGGCAAAATG ATCGTGTTGA AATTATTGCA AATGATCAAG
GTAATANAAC CACTCCATCT TATGTTGCAT TTACTGATAC ANAACGTTTA
ATTGGTGATG CTGCAAANAA TCAAGTTGCA ATGAATCCAA CCAATACAGT
ATTTGATGCT AAACGTTTAA TTGGTCGTAA ATTTAGTGAC AAAGAAGTTC
AAAGTGATAT GAAACATTGG CCATTCAAAG TTATTCCAAA GGATGGTGAT
AAGCCACATA TTCAAGTTGA ATTCAAAGGT GAAACTAAAG TTTTCTCACC
A--------- -GTGTTATGA CAACTCTTAT TCCAAGAAAT ACAACAATTC
CATGTAAGAA AACTCAAACC TTCTCTACAT ACTCTGATAA TCAACCAGGT
GTATTAATTC AAGTTTATGA AGGTGAACGT GCTATGACCA AAGATAATAA
TTTATTGGGT AAATTTGAAC TTTCTGGTAT TCCACCAGCA CCAAGAGGTG
TACCACAAGT TGAAGTTACA TTTGATGTTG ATGCAAATGG TATCTTAAAT
GTATCAGCTG AAGATAAATC AACTGGTAAC AAACAAAAGA TTACAATTAC
CAATGATAAA GGTCGTCTTT CAAAAGAAGA AATTGAAAAA ATGGTTGCTG
ATGCAGAGAA ATTCAAACAA CAAGATGAAC AACAAAAAGA TCGTGTTGAA
TCAAAGAATA AATTGGAAAA TTATGCATTC ACTGTTAAAA ATTCAATTAA
AGATGAAAAA GTTGCAGCCA AAATTTCAGA TTCAGATAAA TCAACTATTG
AATCTGAAAC TGAAAGTGTA CTCAAATGGT TAGAATCAAA TCAAACCGCA
GAAAAGGATG AATATGAAGA TAAGATGAAA GCCTTAGAAG CAGTTGTCAA
TCCAATCATG AGTAAACTCT ATCAAGAAGG AGGTATGCCA CAAGGTGGTG
GTATGCCAGG TGGTATGTCA AATGATTCAC CAAAGAGTTC AAACAACAAA
GTAGACGAAT TAGATTGACG GAATTTTTCA GAGGAAAACA TCTCTATCAA
ATAGATTTCT TAAAAAATAA TAAGTTAGTA AAATCAATAA AGCTTCTCAT
ATATAGTACA C

Translated Amino Acid Sequence VHP236

nsvvqfnl*****ykyikinffvykfl*ink*iiifflihthtyky*iiky*KMSSIGID
LGTTYSCVGVWQNDRVEIIANDQGNXTTPSYVAFTDTXRLIGDAAXNQVAMNPTNTVFDA
KRLIGRKFSDKEVQSDMKHWPFKVIPKDGDKPHIQVEFKGETKVFSP---

---VMTTLIPRNTTIPCKKTQTFSTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIP
PAPRGVPQVEVTFDVDANGILNVSAEDKSTGNKQKITITNDKGRLSKEEIEKMVADAEKF
KQQDEQQKDRVESKNKLENYAFTVKNSIKDEKVAAKISDSDKSTIESETESVLKWLESNQ
TAEKDEYEDKMKALEAVVNPIMSKLYQEGGMPQGGGMPGGMSNDSPKSSNNKVDELD*rn
fseenisik*is*kiis**nq*sfsyivh

Homology VHP236 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHP236 (VHP236Q) /CSM/VH/VHP2-B/VHP236Q.Seq.d/                       2298   0.0
VHB518 (VHB518Q) /CSM/VH/VHB5-A/VHB518Q.Seq.d/                       1578   0.0
VHP437 (VHP437Q) /CSM/VH/VHP4-B/VHP437Q.Seq.d/                       1572   0.0
CHL177 (CHL177Q) /CSM/CH/CHL1-D/CHL177Q.Seq.d/                       1572   0.0
VHP224 (VHP224Q) /CSM/VH/VHP2-A/VHP224Q.Seq.d/                       1570   0.0
SFG805 (SFG805Q) /CSM/SF/SFG8-A/SFG805Q.Seq.d/                       1570   0.0
CHE689 (CHE689Q) /CSM/CH/CHE6-D/CHE689Q.Seq.d/                       1570   0.0
CHL728 (CHL728Q) /CSM/CH/CHL7-B/CHL728Q.Seq.d/                       1568   0.0
VHH751 (VHH751Q) /CSM/VH/VHH7-C/VHH751Q.Seq.d/                       1564   0.0
CHL232 (CHL232Q) /CSM/CH/CHL2-B/CHL232Q.Seq.d/                       1564   0.0

Homology VHP236 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(X75263) D.discoideum (AX3) mRNA for heat shock cognate prot...  1584   0.0    1
(BJ446000) Dictyostelium discoideum cDNA clone:ddv61g10, 3' ...  1584   0.0    1
(L22736) Dictyostelium discoideum heat shock protein (hspB) ...  1576   0.0    1
(BJ437360) Dictyostelium discoideum cDNA clone:ddv34c05, 3' ...  1576   0.0    1
(BJ378377) Dictyostelium discoideum cDNA clone:ddc31a24, 3' ...  1570   0.0    1
(BJ445963) Dictyostelium discoideum cDNA clone:ddv61o06, 3' ...  1568   0.0    1
(BJ382617) Dictyostelium discoideum cDNA clone:ddc45h07, 3' ...  1568   0.0    1
(BJ385640) Dictyostelium discoideum cDNA clone:ddc55k13, 3' ...  1562   0.0    1
(BJ382346) Dictyostelium discoideum cDNA clone:ddc44o08, 3' ...  1562   0.0    1
(BJ398397) Dictyostelium discoideum cDNA clone:dds12e12, 3' ...  1560   0.0    1

Homology VHP236 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P36415) RecName: Full=Heat shock cognate 70 kDa protein 1;     ...   400   e-110
S37394(S37394) dnaK-type molecular chaperone hsc70 - slime mold ...   400   e-110
AK303980_1(AK303980|pid:none) Homo sapiens cDNA FLJ54342 complet...   301   4e-80
AK370996_1(AK370996|pid:none) Hordeum vulgare subsp. vulgare mRN...   297   8e-79
(Q557E0) RecName: Full=Heat shock cognate 70 kDa protein 2;     ...   297   1e-78
AF025951_1(AF025951|pid:none) Dictyostelium discoideum heat-shoc...   297   1e-78
(P22953) RecName: Full=Heat shock cognate 70 kDa protein 1;     ...   296   2e-78
AF033852_1(AF033852|pid:none) Spinacia oleracea cytosolic heat s...   296   2e-78
S46302(S46302;S41402;JA0169;S36623) dnaK-type molecular chaperon...   296   2e-78
FB790108_1(FB790108|pid:none) Sequence 9381 from Patent WO200803...   295   3e-78

Homology VHP236 vs Genome