Homology VHP236 vs DNA
Query= VHP236 (VHP236Q) /CSM/VH/VHP2-B/VHP236Q.Seq.d/
(1311 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(X75263) D.discoideum (AX3) mRNA for heat shock cognate prot... 1584 0.0 1
(BJ446000) Dictyostelium discoideum cDNA clone:ddv61g10, 3' ... 1584 0.0 1
(L22736) Dictyostelium discoideum heat shock protein (hspB) ... 1576 0.0 1
(BJ437360) Dictyostelium discoideum cDNA clone:ddv34c05, 3' ... 1576 0.0 1
(BJ378377) Dictyostelium discoideum cDNA clone:ddc31a24, 3' ... 1570 0.0 1
(BJ445963) Dictyostelium discoideum cDNA clone:ddv61o06, 3' ... 1568 0.0 1
(BJ382617) Dictyostelium discoideum cDNA clone:ddc45h07, 3' ... 1568 0.0 1
(BJ385640) Dictyostelium discoideum cDNA clone:ddc55k13, 3' ... 1562 0.0 1
(BJ382346) Dictyostelium discoideum cDNA clone:ddc44o08, 3' ... 1562 0.0 1
(BJ398397) Dictyostelium discoideum cDNA clone:dds12e12, 3' ... 1560 0.0 1
(BJ383106) Dictyostelium discoideum cDNA clone:ddc46k19, 3' ... 1556 0.0 1
(BJ430602) Dictyostelium discoideum cDNA clone:ddv7l22, 3' e... 1554 0.0 1
(BJ443106) Dictyostelium discoideum cDNA clone:ddv51m24, 3' ... 1550 0.0 1
(BJ441247) Dictyostelium discoideum cDNA clone:ddv46k04, 3' ... 1546 0.0 1
(BJ382612) Dictyostelium discoideum cDNA clone:ddc45g07, 3' ... 1546 0.0 2
(BJ441386) Dictyostelium discoideum cDNA clone:ddv46f13, 3' ... 1544 0.0 2
(BJ349692) Dictyostelium discoideum cDNA clone:dda37h11, 3' ... 1542 0.0 1
(BJ380912) Dictyostelium discoideum cDNA clone:ddc39p17, 3' ... 1538 0.0 1
(BJ380427) Dictyostelium discoideum cDNA clone:ddc38i06, 3' ... 1538 0.0 1
(BJ437313) Dictyostelium discoideum cDNA clone:ddv33j24, 3' ... 1534 0.0 1
(BJ354256) Dictyostelium discoideum cDNA clone:dda53e03, 3' ... 1532 0.0 1
(BJ438802) Dictyostelium discoideum cDNA clone:ddv38c17, 3' ... 1528 0.0 1
(BJ386423) Dictyostelium discoideum cDNA clone:ddc58n05, 3' ... 1524 0.0 1
(BJ385573) Dictyostelium discoideum cDNA clone:ddc55m07, 3' ... 1518 0.0 1
(BJ385656) Dictyostelium discoideum cDNA clone:ddc55n17, 3' ... 1515 0.0 2
(BJ446704) Dictyostelium discoideum cDNA clone:ddv63g16, 3' ... 1511 0.0 1
(BJ446016) Dictyostelium discoideum cDNA clone:ddv61j10, 3' ... 1511 0.0 2
(BJ442700) Dictyostelium discoideum cDNA clone:ddv50p15, 3' ... 1511 0.0 1
(BJ386165) Dictyostelium discoideum cDNA clone:ddc57i07, 3' ... 1511 0.0 1
(BJ382472) Dictyostelium discoideum cDNA clone:ddc44i19, 3' ... 1511 0.0 2
(BJ351979) Dictyostelium discoideum cDNA clone:dda45a11, 3' ... 1511 0.0 2
(BJ386440) Dictyostelium discoideum cDNA clone:ddc58b11, 3' ... 1507 0.0 2
(BJ382330) Dictyostelium discoideum cDNA clone:ddc44l08, 3' ... 1507 0.0 2
(BJ445163) Dictyostelium discoideum cDNA clone:ddv58k15, 3' ... 1503 0.0 1
(BJ442327) Dictyostelium discoideum cDNA clone:ddv49d17, 3' ... 1503 0.0 2
(BJ382896) Dictyostelium discoideum cDNA clone:ddc46a11, 3' ... 1503 0.0 2
(BJ382457) Dictyostelium discoideum cDNA clone:ddc44f20, 3' ... 1503 0.0 2
(BJ355768) Dictyostelium discoideum cDNA clone:dda58l04, 3' ... 1503 0.0 1
(BJ445749) Dictyostelium discoideum cDNA clone:ddv60c17, 3' ... 1501 0.0 1
(BJ441335) Dictyostelium discoideum cDNA clone:ddv46k12, 3' ... 1499 0.0 2
(BJ346440) Dictyostelium discoideum cDNA clone:dda30m19, 3' ... 1499 0.0 2
(BJ376222) Dictyostelium discoideum cDNA clone:ddc21m14, 3' ... 1497 0.0 1
(BJ445389) Dictyostelium discoideum cDNA clone:ddv59f12, 3' ... 1495 0.0 1
(BJ443194) Dictyostelium discoideum cDNA clone:ddv52n04, 3' ... 1495 0.0 2
(BJ438622) Dictyostelium discoideum cDNA clone:ddv38a06, 3' ... 1495 0.0 2
(BJ429806) Dictyostelium discoideum cDNA clone:ddv4o19, 3' e... 1495 0.0 2
(BJ385783) Dictyostelium discoideum cDNA clone:ddc56k01, 3' ... 1495 0.0 2
(BJ378427) Dictyostelium discoideum cDNA clone:ddc31l24, 3' ... 1495 0.0 2
(BJ372291) Dictyostelium discoideum cDNA clone:ddc12a04, 3' ... 1495 0.0 2
(BJ446275) Dictyostelium discoideum cDNA clone:ddv62p03, 3' ... 1493 0.0 1
(BJ379666) Dictyostelium discoideum cDNA clone:ddc35h17, 3' ... 1493 0.0 2
(BJ375899) Dictyostelium discoideum cDNA clone:ddc20p07, 3' ... 1493 0.0 1
(BJ375646) Dictyostelium discoideum cDNA clone:ddc19p07, 3' ... 1493 0.0 1
(BJ436494) Dictyostelium discoideum cDNA clone:ddv31h12, 3' ... 1491 0.0 2
(BJ358282) Dictyostelium discoideum cDNA clone:dda56j19, 3' ... 1491 0.0 1
(BJ442737) Dictyostelium discoideum cDNA clone:ddv50g21, 3' ... 1489 0.0 2
(BJ398467) Dictyostelium discoideum cDNA clone:dds12e16, 3' ... 1489 0.0 2
(BJ397976) Dictyostelium discoideum cDNA clone:dds10a16, 3' ... 1489 0.0 1
(BJ380059) Dictyostelium discoideum cDNA clone:ddc36i24, 3' ... 1489 0.0 2
(BJ378899) Dictyostelium discoideum cDNA clone:ddc33n06, 3' ... 1489 0.0 1
(BJ445856) Dictyostelium discoideum cDNA clone:ddv60i20, 3' ... 1487 0.0 1
(BJ445304) Dictyostelium discoideum cDNA clone:ddv59g04, 3' ... 1487 0.0 2
(BJ445121) Dictyostelium discoideum cDNA clone:ddv58b18, 3' ... 1487 0.0 2
(BJ441298) Dictyostelium discoideum cDNA clone:ddv46d11, 3' ... 1487 0.0 2
(BJ430958) Dictyostelium discoideum cDNA clone:ddv9k09, 3' e... 1487 0.0 2
(BJ401164) Dictyostelium discoideum cDNA clone:dds22i09, 3' ... 1487 0.0 1
(BJ386251) Dictyostelium discoideum cDNA clone:ddc57j13, 3' ... 1487 0.0 2
(BJ385620) Dictyostelium discoideum cDNA clone:ddc55f17, 3' ... 1487 0.0 1
(BJ340113) Dictyostelium discoideum cDNA clone:dda11o13, 3' ... 1487 0.0 1
(BJ431563) Dictyostelium discoideum cDNA clone:ddv14j16, 3' ... 1485 0.0 1
(BJ400584) Dictyostelium discoideum cDNA clone:dds13j22, 3' ... 1485 0.0 1
(BJ382968) Dictyostelium discoideum cDNA clone:ddc46n11, 3' ... 1485 0.0 1
(BJ382682) Dictyostelium discoideum cDNA clone:ddc45f13, 3' ... 1485 0.0 1
(BJ375889) Dictyostelium discoideum cDNA clone:ddc20m10, 3' ... 1485 0.0 1
(BJ435566) Dictyostelium discoideum cDNA clone:ddv27d16, 3' ... 1483 0.0 1
(BJ401217) Dictyostelium discoideum cDNA clone:dds22d14, 3' ... 1483 0.0 1
(BJ399264) Dictyostelium discoideum cDNA clone:dds5j03, 3' e... 1483 0.0 1
(BJ375438) Dictyostelium discoideum cDNA clone:ddc18p15, 3' ... 1483 0.0 1
(BJ372387) Dictyostelium discoideum cDNA clone:ddc12m11, 3' ... 1483 0.0 1
(BJ402624) Dictyostelium discoideum cDNA clone:dds17d15, 3' ... 1481 0.0 1
(BJ386518) Dictyostelium discoideum cDNA clone:ddc58c17, 3' ... 1481 0.0 1
(BJ439010) Dictyostelium discoideum cDNA clone:ddv39l05, 3' ... 1479 0.0 2
(BJ437543) Dictyostelium discoideum cDNA clone:ddv34h17, 3' ... 1479 0.0 2
(BJ400647) Dictyostelium discoideum cDNA clone:dds14l03, 3' ... 1479 0.0 1
(BJ386264) Dictyostelium discoideum cDNA clone:ddc57l14, 3' ... 1479 0.0 2
(BJ382497) Dictyostelium discoideum cDNA clone:ddc44n23, 3' ... 1479 0.0 1
(BJ380695) Dictyostelium discoideum cDNA clone:ddc39c01, 3' ... 1479 0.0 3
(BJ380475) Dictyostelium discoideum cDNA clone:ddc38e07, 3' ... 1479 0.0 3
(BJ349037) Dictyostelium discoideum cDNA clone:dda35m06, 3' ... 1479 0.0 2
(BJ347303) Dictyostelium discoideum cDNA clone:dda26o16, 3' ... 1479 0.0 1
(BJ402625) Dictyostelium discoideum cDNA clone:dds17d16, 3' ... 1477 0.0 1
(BJ380615) Dictyostelium discoideum cDNA clone:ddc38b21, 3' ... 1477 0.0 1
(BJ374039) Dictyostelium discoideum cDNA clone:ddc6a12, 3' e... 1477 0.0 1
(BJ346699) Dictyostelium discoideum cDNA clone:dda24b19, 3' ... 1477 0.0 1
(BJ346416) Dictyostelium discoideum cDNA clone:dda30h22, 3' ... 1477 0.0 1
(BJ343104) Dictyostelium discoideum cDNA clone:dda22e03, 3' ... 1477 0.0 1
(BJ400949) Dictyostelium discoideum cDNA clone:dds15e18, 3' ... 1475 0.0 1
(BJ398014) Dictyostelium discoideum cDNA clone:dds10j16, 3' ... 1475 0.0 1
(BJ376108) Dictyostelium discoideum cDNA clone:ddc21p04, 3' ... 1475 0.0 1
(BJ352451) Dictyostelium discoideum cDNA clone:dda46e22, 3' ... 1475 0.0 1
>(X75263) D.discoideum (AX3) mRNA for heat shock cognate protein
(hsc70).
Length = 2079
Score = 1584 bits (799), Expect = 0.0
Identities = 799/799 (100%)
Strand = Plus / Plus
Query: 513 tgttatgacaactcttattccaagaaatacaacaattccatgtaagaaaactcaaacctt 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1273 tgttatgacaactcttattccaagaaatacaacaattccatgtaagaaaactcaaacctt 1332
Query: 573 ctctacatactctgataatcaaccaggtgtattaattcaagtttatgaaggtgaacgtgc 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1333 ctctacatactctgataatcaaccaggtgtattaattcaagtttatgaaggtgaacgtgc 1392
Query: 633 tatgaccaaagataataatttattgggtaaatttgaactttctggtattccaccagcacc 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1393 tatgaccaaagataataatttattgggtaaatttgaactttctggtattccaccagcacc 1452
Query: 693 aagaggtgtaccacaagttgaagttacatttgatgttgatgcaaatggtatcttaaatgt 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1453 aagaggtgtaccacaagttgaagttacatttgatgttgatgcaaatggtatcttaaatgt 1512
Query: 753 atcagctgaagataaatcaactggtaacaaacaaaagattacaattaccaatgataaagg 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1513 atcagctgaagataaatcaactggtaacaaacaaaagattacaattaccaatgataaagg 1572
Query: 813 tcgtctttcaaaagaagaaattgaaaaaatggttgctgatgcagagaaattcaaacaaca 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1573 tcgtctttcaaaagaagaaattgaaaaaatggttgctgatgcagagaaattcaaacaaca 1632
Query: 873 agatgaacaacaaaaagatcgtgttgaatcaaagaataaattggaaaattatgcattcac 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1633 agatgaacaacaaaaagatcgtgttgaatcaaagaataaattggaaaattatgcattcac 1692
Query: 933 tgttaaaaattcaattaaagatgaaaaagttgcagccaaaatttcagattcagataaatc 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1693 tgttaaaaattcaattaaagatgaaaaagttgcagccaaaatttcagattcagataaatc 1752
Query: 993 aactattgaatctgaaactgaaagtgtactcaaatggttagaatcaaatcaaaccgcaga 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1753 aactattgaatctgaaactgaaagtgtactcaaatggttagaatcaaatcaaaccgcaga 1812
Query: 1053 aaaggatgaatatgaagataagatgaaagccttagaagcagttgtcaatccaatcatgag 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1813 aaaggatgaatatgaagataagatgaaagccttagaagcagttgtcaatccaatcatgag 1872
Query: 1113 taaactctatcaagaaggaggtatgccacaaggtggtggtatgccaggtggtatgtcaaa 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1873 taaactctatcaagaaggaggtatgccacaaggtggtggtatgccaggtggtatgtcaaa 1932
Query: 1173 tgattcaccaaagagttcaaacaacaaagtagacgaattagattgacggaatttttcaga 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1933 tgattcaccaaagagttcaaacaacaaagtagacgaattagattgacggaatttttcaga 1992
Query: 1233 ggaaaacatctctatcaaatagatttcttaaaaaataataagttagtaaaatcaataaag 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1993 ggaaaacatctctatcaaatagatttcttaaaaaataataagttagtaaaatcaataaag 2052
Query: 1293 cttctcatatatagtacac 1311
|||||||||||||||||||
Sbjct: 2053 cttctcatatatagtacac 2071
Score = 712 bits (359), Expect = 0.0
Identities = 365/368 (99%)
Strand = Plus / Plus
Query: 134 aatattaaataattaaatattaaaaaatgtcatcaattggtattgatttaggtacaacat 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 aatattaaataattaaatattaaaaaatgtcatcaattggtattgatttaggtacaacat 89
Query: 194 attcatgtgttggtgtttggcaaaatgatcgtgttgaaattattgcaaatgatcaaggta 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 attcatgtgttggtgtttggcaaaatgatcgtgttgaaattattgcaaatgatcaaggta 149
Query: 254 atanaaccactccatcttatgttgcatttactgatacanaacgtttaattggtgatgctg 313
||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 150 atagaaccactccatcttatgttgcatttactgatacagaacgtttaattggtgatgctg 209
Query: 314 caaanaatcaagttgcaatgaatccaaccaatacagtatttgatgctaaacgtttaattg 373
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 caaagaatcaagttgcaatgaatccaaccaatacagtatttgatgctaaacgtttaattg 269
Query: 374 gtcgtaaatttagtgacaaagaagttcaaagtgatatgaaacattggccattcaaagtta 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gtcgtaaatttagtgacaaagaagttcaaagtgatatgaaacattggccattcaaagtta 329
Query: 434 ttccaaaggatggtgataagccacatattcaagttgaattcaaaggtgaaactaaagttt 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttccaaaggatggtgataagccacatattcaagttgaattcaaaggtgaaactaaagttt 389
Query: 494 tctcacca 501
||||||||
Sbjct: 390 tctcacca 397
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,536,198,796
Number of extensions: 99051097
Number of successful extensions: 8921443
Number of sequences better than 10.0: 40189
Length of query: 1311
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1287
Effective length of database: 97,308,875,965
Effective search space: 125236523366955
Effective search space used: 125236523366955
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home