Dictyostelium discoideum cDNA Clone VHP224

Sequence VHP224

ATCATTATTG TTAAAATAAG AGTAAATATT AAATAATTAA ATATTAAAAA
ATGTCATCAA TTGGTATTGA TTTAGGTACA ACATATTCAT GTGTTGGTGT
TTGGCAAAAT GATCGTGTTG AAATTATTGC AAATGATCAA GGTAATAGAA
CCACTCCATC TTATGTTGCA TTTACTGATA CAGAACGTTT AATTGGTGAT
GCTGCAAAGA ATCAAGTTGC AATGAATCCA ACCAATACAG TATTTGATGC
TAAACGTTTA ATTGGTCGTA AATTTAGTGA CAAAGAAGTT CAAAGTGATA
TGAAACATTG GCCATTCAAA GTTATTCCAA AGGATGGTGA TAAGCCACAT
ATTCAAGTTG AATTCAAAGG TGAAACTAAA GTTTTCTCAC CAGAAGAAAT
CTCTTCAATG GTACTCTTAA AAATGAAAGA AACCGCTGAA GCTTATCTTG
GTAAAACCAT TAATAATGCT GTAATTACCG TTCCAGCTTA TTTCAATGAT
AGTCAACGTC AAGCAACCAA AGATGCTGGT ACAATTTCAA AATTAAATGT
TCAACGTATT ATTAATGAAC CAACTGCTGC TGCTATT--- -------AGA
AACTGCTGGT GGTGTTATGA CAACTCTTAT TCCAAGAAAT ACAACAATTC
CATGTAAGAA AACTCAAACC TTCTCTACAT ACTCTGATAA TCAACCAGGT
GTATTAATTC AAGTTTATGA AGGTGAACGT GCTATGACCA AAGATAATAA
TTTATTGGGT AAATTTGAAC TTTCTGGTAT TCCACCAGCA CCAAGAGGTG
TACCACAAGT TGAAGTTACA TTTGATGTTG ATGCAAATGG TATCTTAAAT
GTATCAGCTG AAGATAAATC AACTGGTAAC AAACAAAAGA TTACAATTAC
CAATGATAAA GGTCGTCTTT CAAAAGAAGA AATTGAAAAA ATGGTTGCTG
ATGCAGAGAA ATTCAAACAA CAAGATGAAC AACAAAAAGA TCGTGTTGAA
TCAAAGAATA AATTGGAAAA TTATGCATTC ACTGTTAAAA ATTCAATTAA
AGATGAAAAA GTTGCAGCCA AAATTTCAGA TTCAGATAAA TCAACTATTG
AATCTGAAAC TGAAAGTGTA CTCAAATGGT TAGAATCAAA TCAAACCGCA
GAAAAGGATG AATATGAAGA TAAGATGAAA GCCTTAGAAG CAGTTGTCAA
TCCAATCATG AGTAAACTCT ATCAAGAAGG AGGTATGCCA CAAGGTGGTG
GTATGCCAGG TGGTATGTCA AATGATTCAC CAAAGAGTTC AAACAACAAA
GTAGACGAAT TAGATTGACG GAATTTTTCA GAGGAAAACA TCTCTATCAA
ATAGATTTCT TAAAAAATAA TAAGTTAGTA AAATCAATAA AGCTTCTCAT
ATA

Translated Amino Acid Sequence VHP224

hyc*nksky*iiky*KMSSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDT
ERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDKEVQSDMKHWPFKVIPKDGDKPHIQVE
FKGETKVFSPEEISSMVLLKMKETAEAYLGKTINNAVITVPAYFNDSQRQATKDAGTISK
LNVQRIINEPTAAAI---

---ETAGGVMTTLIPRNTTIPCKKTQTFSTYSDNQPGVLIQVYEGERAMTKDNNLLGKFE
LSGIPPAPRGVPQVEVTFDVDANGILNVSAEDKSTGNKQKITITNDKGRLSKEEIEKMVA
DAEKFKQQDEQQKDRVESKNKLENYAFTVKNSIKDEKVAAKISDSDKSTIESETESVLKW
LESNQTAEKDEYEDKMKALEAVVNPIMSKLYQEGGMPQGGGMPGGMSNDSPKSSNNKVDE
LD*rnfseenisik*is*kiis**nq*sfsy

Homology VHP224 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHP224 (VHP224Q) /CSM/VH/VHP2-A/VHP224Q.Seq.d/                       2619   0.0
SFG805 (SFG805Q) /CSM/SF/SFG8-A/SFG805Q.Seq.d/                       1598   0.0
CHL232 (CHL232Q) /CSM/CH/CHL2-B/CHL232Q.Seq.d/                       1592   0.0
SFC313 (SFC313Q) /CSM/SF/SFC3-A/SFC313Q.Seq.d/                       1590   0.0
SFB318 (SFB318Q) /CSM/SF/SFB3-A/SFB318Q.Seq.d/                       1590   0.0
CHQ192 (CHQ192Q) /CSM/CH/CHQ1-D/CHQ192Q.Seq.d/                       1588   0.0
VHP437 (VHP437Q) /CSM/VH/VHP4-B/VHP437Q.Seq.d/                       1584   0.0
VFD486 (VFD486Q) /CSM/VF/VFD4-D/VFD486Q.Seq.d/                       1584   0.0
CHL528 (CHL528Q) /CSM/CH/CHL5-B/CHL528Q.Seq.d/                       1584   0.0
CHL177 (CHL177Q) /CSM/CH/CHL1-D/CHL177Q.Seq.d/                       1584   0.0

Homology VHP224 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(X75263) D.discoideum (AX3) mRNA for heat shock cognate prot...  1598   0.0    1
(BJ445963) Dictyostelium discoideum cDNA clone:ddv61o06, 3' ...  1598   0.0    1
(BJ382346) Dictyostelium discoideum cDNA clone:ddc44o08, 3' ...  1592   0.0    1
(L22736) Dictyostelium discoideum heat shock protein (hspB) ...  1590   0.0    1
(BJ430602) Dictyostelium discoideum cDNA clone:ddv7l22, 3' e...  1584   0.0    1
(BJ382612) Dictyostelium discoideum cDNA clone:ddc45g07, 3' ...  1576   0.0    1
(BJ441386) Dictyostelium discoideum cDNA clone:ddv46f13, 3' ...  1574   0.0    1
(BJ446000) Dictyostelium discoideum cDNA clone:ddv61g10, 3' ...  1570   0.0    1
(BJ398397) Dictyostelium discoideum cDNA clone:dds12e12, 3' ...  1570   0.0    1
(BJ437360) Dictyostelium discoideum cDNA clone:ddv34c05, 3' ...  1564   0.0    1

Homology VHP224 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P36415) RecName: Full=Heat shock cognate 70 kDa protein 1;     ...   410   e-113
S37394(S37394) dnaK-type molecular chaperone hsc70 - slime mold ...   410   e-113
(Q557E0) RecName: Full=Heat shock cognate 70 kDa protein 2;     ...   330   1e-88
AF025951_1(AF025951|pid:none) Dictyostelium discoideum heat-shoc...   330   1e-88
(Q54BE0) RecName: Full=Heat shock cognate 70 kDa protein 3;     ...   311   4e-83
AK370996_1(AK370996|pid:none) Hordeum vulgare subsp. vulgare mRN...   307   8e-82
U71151_1(U71151|pid:none) Pneumocystis carinii heat shock protei...   307   1e-81
AY495382_1(AY495382|pid:none) Trypanosoma rangeli isolate Tre he...   307   1e-81
U80967_1(U80967|pid:none) Pneumocystis carinii f. sp. carinii he...   307   1e-81
(P22953) RecName: Full=Heat shock cognate 70 kDa protein 1;     ...   306   2e-81

Homology VHP224 vs Genome