Homology VHO523 vs Protein
Query= VHO523 (VHO523Q) /CSM/VH/VHO5-A/VHO523Q.Seq.d/
(635 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CP000583_96(CP000583|pid:none) Ostreococcus lucimarinus CCE9901 ... 123 6e-27
CR954203_94(CR954203|pid:none) Ostreococcus tauri strain OTTH059... 120 4e-26
BT033317_1(BT033317|pid:none) Zea mays full-length cDNA clone ZM... 119 1e-25
EU958991_1(EU958991|pid:none) Zea mays clone 208647 unknown mRNA. 119 1e-25
AK069774_1(AK069774|pid:none) Oryza sativa Japonica Group cDNA c... 117 3e-25
EF147277_1(EF147277|pid:none) Populus trichocarpa clone WS0122_C... 116 1e-24
AM451482_4(AM451482|pid:none) Vitis vinifera contig VV78X165379.... 115 1e-24
BT097590_1(BT097590|pid:none) Soybean clone JCVI-FLGm-22C16 unkn... 115 2e-24
AB015477_4(AB015477|pid:none) Arabidopsis thaliana genomic DNA, ... 113 8e-24
CU329671_1318(CU329671|pid:none) Schizosaccharomyces pombe chrom... 102 1e-20
(O94673) RecName: Full=Uncharacterized membrane protein C776.05;... 102 2e-20
FM992688_968(FM992688|pid:none) Candida dubliniensis CD36 chromo... 93 9e-18
AE017342_480(AE017342|pid:none) Cryptococcus neoformans var. neo... 88 4e-16
CP000497_420(CP000497|pid:none) Scheffersomyces stipitis CBS 605... 88 4e-16
FN393070_398(FN393070|pid:none) Saccharomyces cerevisiae EC1118 ... 87 5e-16
AL451017_5(AL451017|pid:none) Neurospora crassa DNA linkage grou... 86 1e-15
(P48236) RecName: Full=Uncharacterized membrane protein YGR149W;... 86 1e-15
FQ857332_11(FQ857332|pid:none) Piriformospora indica PIRI_contig... 86 1e-15
HE576754_542(HE576754|pid:none) Naumovozyma castellii CBS 4309 c... 84 5e-15
CP003003_382(CP003003|pid:none) Myceliophthora thermophila ATCC ... 84 7e-15
CR382134_634(CR382134|pid:none) Debaryomyces hansenii strain CBS... 84 7e-15
CP001575_307(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 83 1e-14
AM270031_11(AM270031|pid:none) Aspergillus niger contig An02c037... 82 3e-14
AP007151_1250(AP007151|pid:none) Aspergillus oryzae RIB40 DNA, S... 78 3e-13
AM920435_705(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 77 8e-13
CP002497_391(CP002497|pid:none) Eremothecium cymbalariae DBVPG#7... 75 2e-12
FN392320_1240(FN392320|pid:none) Pichia pastoris GS115 chromosom... 75 3e-12
CU640366_277(CU640366|pid:none) Podospora anserina S mat+ genomi... 74 4e-12
CU928169_298(CU928169|pid:none) Kluyveromyces thermotolerans str... 74 6e-12
FQ790330_70(FQ790330|pid:none) Botryotinia fuckeliana isolate T4... 70 1e-10
FN357391_7(FN357391|pid:none) Schistosoma mansoni genome sequenc... 61 5e-08
FN357391_6(FN357391|pid:none) Schistosoma mansoni genome sequenc... 61 5e-08
FN357391_8(FN357391|pid:none) Schistosoma mansoni genome sequenc... 49 2e-04
AM502253_94(AM502253|pid:none) Leishmania infantum chromosome 35... 44 0.005
FR799622_79(FR799622|pid:none) Leishmania donovani BPK282A1 comp... 44 0.005
FR799587_77(FR799587|pid:none) Leishmania mexicana MHOM/GT/2001/... 44 0.006
AM494971_84(AM494971|pid:none) Leishmania braziliensis chromosom... 44 0.008
AP009493_2014(AP009493|pid:none) Streptomyces griseus subsp. gri... 38 0.44
CP002669_635(CP002669|pid:none) Mycoplasma hyorhinis MCLD, compl... 36 1.3
CP002170_486(CP002170|pid:none) Mycoplasma hyorhinis HUB-1, comp... 36 1.3
FQ859185_741(FQ859185|pid:none) Streptomyces cattleya str. NRRL ... 35 2.8
CP002993_4562(CP002993|pid:none) Streptomyces sp. SirexAA-E, com... 35 2.8
CP002475_1785(CP002475|pid:none) Streptomyces flavogriseus ATCC ... 35 2.8
AP008211_497(AP008211|pid:none) Oryza sativa (japonica cultivar-... 35 3.7
FQ857340_4(FQ857340|pid:none) Piriformospora indica PIRI_contig_... 34 4.8
>CP000583_96(CP000583|pid:none) Ostreococcus lucimarinus CCE9901
chromosome 3, complete sequence.
Length = 345
Score = 123 bits (309), Expect = 6e-27
Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Frame = +1
Query: 64 KVTPNLFKLVFALSNGPLAWGTIVWRNSLVFHDVDKLTSVFIHLCPPIVTYCLRWF---- 231
K + +F+ +FA +NGP+ +WRNSLVFH VDK++S+F+H P ++T+C RW+
Sbjct: 99 KKSATVFRCIFAFANGPVLLAIPLWRNSLVFHSVDKVSSIFVHAMPCLMTWCGRWYGFGN 158
Query: 232 -PNVYPEQLACGGVECVLSFKEIFFVPFMVYAFWQVFYYIKTEVVDSDKLANDKEIMTSS 408
N + V + ++ P Y FWQ Y KTE++D KL +D +MTS
Sbjct: 159 DVNRLSVRELGADVSVLTGCLDLMVYPMFAYLFWQALYLAKTELIDRVKLVSDPALMTSL 218
Query: 409 RWVSVKQPHPIYRWCQK--------------NGYNVSPVVILILVQMLYTLATCISLPFL 546
RW++ + ++ K + ++ + +++Q+ YT+ T I +P
Sbjct: 219 RWLASDRNSSANKYALKMMRGIGLFGADEFFDAESIKTKFVFVMLQLGYTIVTFIPIPLC 278
Query: 547 IQSFWLHTVFMIYIFVTISWNGASYYXEV 633
+++ HT M F + +NGA YY +V
Sbjct: 279 YSNYYAHTALMWAAFGSSVYNGAVYYIDV 307
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,963,457,642
Number of extensions: 43093989
Number of successful extensions: 88777
Number of sequences better than 10.0: 45
Number of HSP's gapped: 88717
Number of HSP's successfully gapped: 45
Length of query: 211
Length of database: 1,732,582,204
Length adjustment: 126
Effective length of query: 85
Effective length of database: 1,058,581,366
Effective search space: 89979416110
Effective search space used: 89979416110
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
Dictyostelium discoideum cDNA Project Home