Dictyostelium discoideum cDNA Clone VHO523

Sequence VHO523

---------- GTCAAATATT GCTATTGTTT TATTTGTTTG GTCATCAATA
TATTTTAGGA GAAAAGGTTA CACCAAATTT ATTCAAATTG GTATTTGCAC
TAAGTAATGG TCCATTGGCA TGGGGTACAA TCGTATGGAG AAATAGTTTA
GTATTCCATG ATGTTGACAA GTTGACATCG GTTTTCATTC ATCTTTGTCC
ACCAATTGTA ACCTATTGTT TGCGTTGGTT CCCAAACGTT TATCCAGAGC
AATTGGCATG TGGTGGTGTA GAGTGTGTTT TATCCTTTAA AGAGATTTTC
TTTGTTCCAT TCATGGTGTA TGCATTTTGG CAAGTCTTTT ACTACATTAA
AACTGAGGTG GTCGATAGTG ACAAATTAGC CAATGACAAG GAAATAATGA
CCTCTTCAAG ATGGGTGTCT GTAAAACAAC CCCACCCAAT CTATAGATGG
TGTCAAAAGA ATGGTTACAA CGTTAGTCCT GTGGTTATTT TAATTTTAGT
TCAAATGCTT TACACTTTGG CCACTTGTAT CTCTTTACCT TTCTTAATTC
AATCATTTTG GTTACACACT GTCTTTATGA TTTACATCTT TGTCACAATC
TCTTGGAATG GTGCCTCTTA TTATTTNGAA GTTTT

Translated Amino Acid Sequence VHO523

---QILLLFYLFGHQYILGEKVTPNLFKLVFALSNGPLAWGTIVWRNSLVFHDVDKLTSV
FIHLCPPIVTYCLRWFPNVYPEQLACGGVECVLSFKEIFFVPFMVYAFWQVFYYIKTEVV
DSDKLANDKEIMTSSRWVSVKQPHPIYRWCQKNGYNVSPVVILILVQMLYTLATCISLPF
LIQSFWLHTVFMIYIFVTISWNGASYYXEV

Homology VHO523 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHO523 (VHO523Q) /CSM/VH/VHO5-A/VHO523Q.Seq.d/                       1233   0.0
SFL335 (SFL335Q) /CSM/SF/SFL3-B/SFL335Q.Seq.d/                       1201   0.0
CFI691 (CFI691Q) /CSM/CF/CFI6-D/CFI691Q.Seq.d/                       1174   0.0
SSE723 (SSE723Q) /CSM/SS/SSE7-A/SSE723Q.Seq.d/                       1154   0.0
CHM318 (CHM318Q) /CSM/CH/CHM3-A/CHM318Q.Seq.d/                       1132   0.0
CHC609 (CHC609Q) /CSM/CH/CHC6-A/CHC609Q.Seq.d/                       1063   0.0
AFE568 (AFE568Q) /CSM/AF/AFE5-C/AFE568Q.Seq.d/                       1043   0.0
VFE430 (VFE430Q) /CSM/VF/VFE4-B/VFE430Q.Seq.d/                       1037   0.0
CHG164 (CHG164Q) /CSM/CH/CHG1-C/CHG164Q.Seq.d/                       1029   0.0
VFL837 (VFL837Q) /CSM/VF/VFL8-B/VFL837Q.Seq.d/                       1015   0.0

Homology VHO523 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


L29074|L29074.1 Homo sapiens fragile X mental retardation sy...    38   0.077  5
AP001958|AP001958.1 Homo sapiens genomic DNA, chromosome 4q2...    32   0.10   10
AL589697|AL589697.1 Human DNA sequence *** SEQUENCING CANCEL...    40   0.12   7
AC125517|AC125517.4 Mus musculus BAC clone RP24-261P6 from c...    48   0.15   1
AC136870|AC136870.3 Rattus norvegicus clone CH230-77E17, WOR...    36   0.22   7
AP004171|AP004171.1 Mycoplasma penetrans genomic DNA, comple...    34   0.26   9
AP003508|AP003508.1 Oryza sativa (japonica cultivar-group) g...    38   0.26   7
AC114758|AC114758.1 Homo sapiens chromosome 4 clone RP11-339...    34   0.49   8
AC023926|AC023926.6 Homo sapiens chromosome 8, clone RP11-9P...    36   0.58   6
AC018444|AC018444.4 Homo sapiens chromosome 4 clone RP11-685...    36   0.59   6

Homology VHO523 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP000583_96(CP000583|pid:none) Ostreococcus lucimarinus CCE9901 ...   123   6e-27
CR954203_94(CR954203|pid:none) Ostreococcus tauri strain OTTH059...   120   4e-26
BT033317_1(BT033317|pid:none) Zea mays full-length cDNA clone ZM...   119   1e-25
EU958991_1(EU958991|pid:none) Zea mays clone 208647 unknown mRNA.     119   1e-25
AK069774_1(AK069774|pid:none) Oryza sativa Japonica Group cDNA c...   117   3e-25
EF147277_1(EF147277|pid:none) Populus trichocarpa clone WS0122_C...   116   9e-25
AM451482_4(AM451482|pid:none) Vitis vinifera contig VV78X165379....   115   1e-24
BT097590_1(BT097590|pid:none) Soybean clone JCVI-FLGm-22C16 unkn...   115   2e-24
AB015477_4(AB015477|pid:none) Arabidopsis thaliana genomic DNA, ...   113   8e-24
(O94673) RecName: Full=Uncharacterized membrane protein C776.05;...   102   2e-20

Homology VHO523 vs Genome