Homology VHO523 vs DNA
Query= VHO523 (VHO523Q) /CSM/VH/VHO5-A/VHO523Q.Seq.d/
(635 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; ddbjrod9.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq;
ddbjmam.seq; /db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq;
ddbjinv1.seq; ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
ddbjbct7.seq; /db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq;
ddbjvrl2.seq; ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq;
ddbjphg.seq; /db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss65.seq;
ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq; ddbjgss69.seq;
ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq; ddbjgss72.seq;
ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq; ddbjgss8.seq;
ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg6.seq; ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg2.seq; ddbjpat1.seq; ddbjpat2.seq;
ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq; ddbjpat7.seq;
ddbjpat8.seq; ddbjpat9.seq; /db/DDBJNEW.DATA/b/new_ddbjpat.seq;
ddbjsts1.seq; ddbjsts2.seq; ddbjsts3.seq;
/db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq;
/db/DDBJNEW.DATA/b/new_est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/b/new_est_crei1.seq; est_cint1.seq;
/db/DDBJNEW.DATA/b/new_est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; /db/DDBJNEW.DATA/b/new_est_rest1.seq
32,871,094 sequences; V,060,222,365 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
L29074|L29074.1 Homo sapiens fragile X mental retardation sy... 38 0.077 5
AP001958|AP001958.1 Homo sapiens genomic DNA, chromosome 4q2... 32 0.10 10
AL589697|AL589697.1 Human DNA sequence *** SEQUENCING CANCEL... 40 0.12 7
AC125517|AC125517.4 Mus musculus BAC clone RP24-261P6 from c... 48 0.15 1
AC136870|AC136870.3 Rattus norvegicus clone CH230-77E17, WOR... 36 0.22 7
AP004171|AP004171.1 Mycoplasma penetrans genomic DNA, comple... 34 0.26 9
AP003508|AP003508.1 Oryza sativa (japonica cultivar-group) g... 38 0.26 7
AC114758|AC114758.1 Homo sapiens chromosome 4 clone RP11-339... 34 0.49 8
AC023926|AC023926.6 Homo sapiens chromosome 8, clone RP11-9P... 36 0.58 6
AC018444|AC018444.4 Homo sapiens chromosome 4 clone RP11-685... 36 0.59 6
AC144222|AC144222.1 Macaca mulatta clone CH250-272E23, *** S... 46 0.61 1
AC127167|AC127167.16 Medicago truncatula clone mth2-26p20, W... 38 0.64 6
AL772242|AL772242.7 Mouse DNA sequence from clone RP23-15E4 ... 36 0.66 7
AC093462|AC093462.11 Homo sapiens chromosome 18, clone RP11-... 32 0.77 7
AP006693|AP006693.1 Lotus corniculatus var. japonicus genomi... 36 0.88 6
AL732317|AL732317.13 Mouse DNA sequence from clone RP23-139F... 32 1.1 7
AC010746|AC010746.8 Homo sapiens BAC clone RP11-550E21 from ... 38 1.5 5
AL928868|AL928868.5 Mouse DNA sequence from clone RP23-428O1... 40 1.5 6
AC106291|AC106291.4 Rattus norvegicus clone CH230-72C9, WORK... 34 1.7 9
AC091308|AC091308.3 Mus musculus clone RP23-103P9, WORKING D... 40 2.0 7
BX942820|BX942820.3 Zebrafish DNA sequence *** SEQUENCING IN... 34 2.0 7
AC127930|AC127930.3 Rattus norvegicus clone CH230-324F12, **... 40 2.0 5
BX000431|BX000431.10 Zebrafish DNA sequence from clone DKEY-... 40 2.1 7
AC141479|AC141479.3 Mus musculus BAC clone RP23-281N15 from ... 44 2.4 1
AC117604|AC117604.4 Mus musculus chromosome 12 clone RP23-2F... 44 2.4 1
AQ679050|AQ679050.1 HS_2125_B1_G06_MR CIT Approved Human Gen... 44 2.4 1
CG948093|CG948093.1 MBEFR51TF mth2 Medicago truncatula genom... 44 2.4 1
AA515774|AA515774.1 ni18g10.s1 NCI_CGAP_Co4 Homo sapiens cDN... 30 2.6 3
AC019098|AC019098.3 Homo sapiens chromosome 11 clone RP11-42... 36 2.7 6
AL772193|AL772193.5 Zebrafish DNA sequence from clone CH211-... 42 2.7 3
AC113383|AC113383.2 Homo sapiens chromosome 5 clone RP11-336... 36 2.8 4
AL590229|AL590229.3 Human DNA sequence from clone RP11-192B1... 32 2.8 6
AL928844|AL928844.2 Zebrafish DNA sequence *** SEQUENCING IN... 36 3.5 6
AC079599|AC079599.17 Homo sapiens chromosome 12 clone RP11-1... 36 3.9 6
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma... 32 4.2 11
AC130837|AC130837.4 Mus musculus BAC clone RP24-157P23 from ... 36 4.2 5
AC027238|AC027238.5 Homo sapiens chromosome 8, clone RP11-37... 32 4.3 2
AC011626|AC011626.8 Homo sapiens chromosome 8, clone RP11-36... 32 4.3 2
AC022873|AC022873.5 Homo sapiens chromosome 8 clone RP11-391... 32 4.3 2
AC067984|AC067984.4 Homo sapiens chromosome 8 clone RP11-551... 32 4.3 2
AC122027|AC122027.1 Mus musculus BAC clone RP24-390L20 from ... 32 4.9 7
AC139760|AC139760.2 Mus musculus chromosome UNK clone RP23-3... 42 5.2 5
AR409405|AR409405.1 Sequence 1 from patent US 6632935. 32 5.4 13
BD061520|BD061520.1 Genome DNA of symbiotic bacteria of aphid. 32 5.4 13
AA405684|AA405684.1 zu66b10.s1 Soares_testis_NHT Homo sapien... 30 5.6 3
AC110174|AC110174.10 Mus musculus chromosome 3, clone RP23-2... 32 5.9 7
CB066292|CB066292.1 PVBE12C11.E PvBEcDNA Plasmodium vivax cD... 30 5.9 2
AC111096|AC111096.15 Mus musculus chromosome 3, clone RP23-1... 36 6.0 6
AC122621|AC122621.5 Rattus norvegicus clone CH230-70D24, WOR... 38 6.0 4
AL161738|AL161738.15 Human DNA sequence from clone RP11-549G... 40 6.0 4
AC025575|AC025575.21 Homo sapiens 12 BAC RP11-934P3 (Roswell... 36 6.2 6
BX908805|BX908805.1 Human DNA sequence from clone RP11-526F1... 34 6.3 5
AC115599|AC115599.2 Dictyostelium discoideum chromosome 2 ma... 32 6.4 7
AC015898|AC015898.4 Homo sapiens clone RP11-21A2, WORKING DR... 34 6.6 6
AC092635|AC092635.2 Homo sapiens BAC clone RP11-342E23 from ... 32 6.7 5
AC006714|AC006714.3 Caenorhabditis elegans cosmid Y119D3B, c... 32 6.9 5
AC022731|AC022731.4 Homo sapiens chromosome 8, clone RP11-38... 34 7.0 6
AC034152|AC034152.5 Homo sapiens chromosome 3 clone RP11-175... 38 7.1 6
AC104590|AC104590.4 Homo sapiens chromosome 15, clone RP11-6... 36 8.0 5
AC136506|AC136506.10 Medicago truncatula clone mth2-33c8, co... 32 8.5 5
BX890637|BX890637.2 Mouse DNA sequence *** SEQUENCING CANCEL... 40 8.5 6
AL162378|AL162378.16 Human DNA sequence from clone RP11-394C... 32 9.1 6
BQ836572|BQ836572.1 rf47e11.y1 Meloidogyne hapla J2 pAMP1 v1... 30 9.3 3
AL135961|AL135961.4 Human chromosome 14 DNA sequence BAC R-9... 34 9.5 5
AC121499|AC121499.8 Mus musculus chromosome 9 clone RP23-269... 42 9.6 1
AL359394|AL359394.9 Human DNA sequence from clone RP11-264M2... 42 9.6 1
AC107007|AC107007.4 Rattus norvegicus clone CH230-202D17, **... 42 9.6 1
AJ421481|AJ421481.1 Bos taurus X-inactivation center region,... 42 9.6 1
AZ772611|AZ772611.1 1M0583G07R Mouse 10kb plasmid UUGC1M lib... 42 9.6 1
AC136855|AC136855.2 Rattus norvegicus clone CH230-70O16, ***... 42 9.6 1
AC098343|AC098343.5 Rattus norvegicus clone CH230-1P15, *** ... 42 9.6 1
AC091340|AC091340.7 Rattus norvegicus clone CH230-1D10, *** ... 42 9.6 1
BG219133|BG219133.1 RST38886 Athersys RAGE Library Homo sapi... 42 9.6 1
AC091478|AC091478.4 Mus musculus chromosome 3 clone RP23-469... 42 9.6 1
AA109697|AA109697.1 mp33c09.r1 Barstead MPLRB1 Mus musculus ... 42 9.6 1
BG201285|BG201285.1 RST20613 Athersys RAGE Library Homo sapi... 42 9.6 1
BX294377|BX294377.10 Zebrafish DNA sequence from clone DKEY-... 42 9.6 1
AC122899|AC122899.2 Mus musculus BAC clone RP23-74L7 from 3,... 42 9.6 1
BX470085|BX470085.6 Zebrafish DNA sequence from clone DKEY-2... 42 9.6 1
CK572024|CK572024.1 est_l_vannamei2328 CdWthem9h Litopenaeus... 42 9.6 1
BF180786|BF180786.1 601804909F1 NCI_CGAP_Mam5 Mus musculus c... 42 9.6 1
BM508853|BM508853.1 ii40g06.y1 Melton Normalized Mixed Mouse... 42 9.6 1
CE216604|CE216604.1 tigr-gss-dog-17000373089963 Dog Library ... 42 9.6 1
AY159036|AY159036.1 Dictyostelium discoideum LvsE (lvsE) gen... 42 9.6 1
AL731561|AL731561.12 Human DNA sequence from clone RP11-463P... 34 9.8 5
>L29074|L29074.1 Homo sapiens fragile X mental retardation syndrome
protein (FMR1) gene, alternative splice products, complete
cds; and pseudogene, complete sequence.
Length = 185775
Score = 38.2 bits (19), Expect(5) = 0.077
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 45 tcaatatattttaggagaa 63
|||||||||||||||||||
Sbjct: 174018 tcaatatattttaggagaa 174000
Score = 34.2 bits (17), Expect(5) = 0.077
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 52 attttaggagaaaaggt 68
|||||||||||||||||
Sbjct: 32733 attttaggagaaaaggt 32749
Score = 32.2 bits (16), Expect(5) = 0.077
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 149 tagtattccatgatgt 164
||||||||||||||||
Sbjct: 100050 tagtattccatgatgt 100035
Score = 30.2 bits (15), Expect(5) = 0.077
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 182 ttttcattcatcttt 196
|||||||||||||||
Sbjct: 56826 ttttcattcatcttt 56812
Score = 26.3 bits (13), Expect(5) = 0.077
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 485 ttattttaatttt 497
|||||||||||||
Sbjct: 53958 ttattttaatttt 53970
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 17,375,189
Number of Sequences: 32871094
Number of extensions: 17375189
Number of successful extensions: 1377060
Number of sequences better than 10.0: 173
length of query: 635
length of database: V,060,222,365
effective HSP length: 22
effective length of query: 613
effective length of database: U,337,058,297
effective search space: 22887616736061
effective search space used: 22887616736061
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
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