Dictyostelium discoideum cDNA Clone VHO517

Sequence VHO517

TTGTCTTTAG TGCAGATCTT GATGGTAGTA GCAAATATTC AAAAGAATTT
ACTTTGAAGG CCGAAGTGGG GAAGGGTTCC ATAACAATGG AATTCACTTA
TGGGTGAGTC GATCCTAAGG TTTGGGTTAA CTCTCTCTAA TAAGGTTACT
AGGTCATTGG ATCGAAAGTG AAGGTGGCTT TAACACTAGT GACTTTATAG
GCCGAAAGGG AAGCGGGTTA AAATTCCTGC ACCATCGAAT GGGATATTAG
GGTAACCGAT CGTAATCCGG GACATCAATT GGCGGTCGAG GAAGAGTTAT
CTTTTCTTGT TAACATTGTC TTGGGGTCCT CCGAATCAGG TCAACTGGAG
ACGAGGATTC ATCGCACAAT GGAAGAGCAC AGTCCTTTGG ATTGGGTCTC
GCATCCGCTA AATGGTCCTT GAAAACCGGA TTATGGTATT TAATCCTATT
TGGTGTTCGT ACCAATAACC ACATCAGGTC TCCAAGGTGA ATAGCCTCTG
GTCAAATGTA TTAATGTAGA TAAGGGAAGT CGGCAAAACC GATCTGTAAC
TTCGGGATAA GGATTGGCTC TAAAGGCTGG TGGAGTGGAC ATATTGGAGT
TTGCTATTTG TTTTTTACTT T--------- -CTAATTTAT ATCCTCGTTC
CGCTCAACTC TTCGATTGTA GACGACTATC AAATGAACTA GGTGCTGTAA
GCTTCCGAGT AGCGTTCAGT TACGAGGGGT TGAGGCTTTT CCATTAGTTC
TTATTTTTCA ACACACAGAC ACACAAAATG GGTATTTCTC GTGACGCTCT
CCACAAACAT AGACTTACAG GTGCTGCCCG TAAATGTAAC TACAAAAAGA
GAAAGTATGA GTTAGGTAGA CAAGCTGCCA AAACAAAGAT TTGCTCTCAA
GGTGAAGAAA AGCGTGTTAG ATCAATCAGA GTTCGTGGTG GTCACCAAAA
ATTCAGAGCC TTAAGACTCG ATACTGGTAA TTTCTCATGG GCCACCGAAA
AGATCACCCG TAAATGTCGT ATCCTTAACG TCGTTTACAA TGCCACCTCT
AACGATTTAG TCCGTACCAA TCGTCCAAAT TGATGCCACC CCATACAAAC
AATGGTATGA AACTCACTAC GGTGTTGTTG TTGGTAAAAA GAAATCCGCC
AAAAAGGACG GTGAAGCTGA ACAAGTTGTC AAGAAATCCG CTTCTCTCCT
TGCCAAACTT GCCTCAAGAG CTAAGGGTAG AGTTTTAGAT TCAGCCATCG
AATCACAAAT CGGTGAAGGT CGTTTCTTTG CTCGTATCAC CTCAAGACCA
GGTCAAGTCG GTAAATGTGA TGGTTACATC TTAGAAGCTA AGGAATTAGA
ATTCTACCAA AGAAGACTCC AAAAGAAGAA ATCTGCCAAA TAAACATACA
G

Translated Amino Acid Sequence VHO517

cl*crs*w**qifkriyfegrsgegfhnngihlwvsrs*glg*lslirllghwieseggf
ntsdfigrkgsglkflhhrmgy*gnrs*sgtsiggrgrvifsc*hclgvlrirstgdeds
shngraqsfglglasakwslktglwylilfgvrtnnhirspr*iasgqmy*cr*GKSAKP
ICNFGIRIGSKGWWSGHIGVCYLFFT---

---NLYPRSAQLFDCRRLSNELGAVSFRVAFSYEGLRLFH*flffntqthkmgisrdalh
khrltgaarkcnykkrkyelgrqaaktkicsqgeekrvrsirvrgghqkfralrldtgnf
swatekitrkcrilnvvynatsndlvrtnrpn*chpiqtmv*nslrcccw*keirqkgr*
s*tscqeirfspcqtclks*g*sfrfshritnr*rsflcsyhlktrssr*m*wlhlrs*g
irilpkktpkeeicqiniq

Homology VHO517 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHO517 (VHO517Q) /CSM/VH/VHO5-A/VHO517Q.Seq.d/                       2718   0.0
VHK396 (VHK396Q) /CSM/VH/VHK3-D/VHK396Q.Seq.d/                       1223   0.0
VHL535 (VHL535Q) /CSM/VH/VHL5-B/VHL535Q.Seq.d/                       1205   0.0
SHI601 (SHI601Q) /CSM/SH/SHI6-A/SHI601Q.Seq.d/                       1181   0.0
VHH863 (VHH863Q) /CSM/VH/VHH8-C/VHH863Q.Seq.d/                       1179   0.0
CHS113 (CHS113Q) /CSM/CH/CHS1-A/CHS113Q.Seq.d/                       1178   0.0
VHG170 (VHG170Q) /CSM/VH/VHG1-C/VHG170Q.Seq.d/                       1176   0.0
VHQ207 (VHQ207Q) /CSM/VH/VHQ2-A/VHQ207Q.Seq.d/                       1152   0.0
AHL322 (AHL322Q) /CSM/AH/AHL3-A/AHL322Q.Seq.d/                       1146   0.0
VHA502 (VHA502Q) /CSM/VH/VHA5-A/VHA502Q.Seq.d/                       1128   0.0

Homology VHO517 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ445593) Dictyostelium discoideum cDNA clone:ddv60a05, 3' ...  1526   0.0    1
(AY171066) Dictyostelium discoideum extrachromosomal palindr...  1231   0.0    1
(BJ426713) Dictyostelium discoideum cDNA clone:ddv60a05, 5' ...  1231   0.0    1
(BJ443122) Dictyostelium discoideum cDNA clone:ddv51p23, 3' ...  1223   0.0    1
(BJ425001) Dictyostelium discoideum cDNA clone:ddv54e09, 5' ...  1205   0.0    1
(BJ395997) Dictyostelium discoideum cDNA clone:dds41a02, 5' ...  1181   0.0    1
(BJ422673) Dictyostelium discoideum cDNA clone:ddv46n16, 5' ...  1179   0.0    1
(BJ371460) Dictyostelium discoideum cDNA clone:ddc58i03, 5' ...  1178   0.0    1
(BJ421732) Dictyostelium discoideum cDNA clone:ddv43k17, 5' ...  1176   0.0    1
(DQ340385) Dictyostelium citrinum 17S ribosomal RNA, 5.8S ri...  1152   0.0    1

Homology VHO517 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54E24) RecName: Full=40S ribosomal protein S8;                      201   7e-90
BT053433_1(BT053433|pid:none) Medicago truncatula clone MTYFP_FQ...   126   5e-48
FR824198_18(FR824198|pid:none) Albugo laibachii Nc14, genomic co...   122   5e-48
DQ200362_1(DQ200362|pid:none) Solanum tuberosum clone 054E02 unk...   125   1e-47
(Q08069) RecName: Full=40S ribosomal protein S8;  &BT035428_1(BT...   125   2e-47
D38010_1(D38010|pid:none) Oryza sativa Japonica Group mRNA for r...   125   2e-47
(P49199) RecName: Full=40S ribosomal protein S8;  &AK102757_1(AK...   125   2e-47
AK068316_1(AK068316|pid:none) Oryza sativa Japonica Group cDNA c...   125   4e-47
BT092158_1(BT092158|pid:none) Soybean clone JCVI-FLGm-10A6 unkno...   124   9e-47
EF082565_1(EF082565|pid:none) Picea sitchensis clone WS02714_P12...   124   3e-46

Homology VHO517 vs Genome