Dictyostelium discoideum cDNA Clone VHO122

Sequence VHO122

ATTATNGTGT TTTTAACACA TTAACAACAT CCTTCTTTGA CTTAAGCTTC
ATCACTTAAG TGTAACGTCA GATGAAACAC CAGAATCATA TTTCACAGTA
NGGGTGCGAT TTCACTATGG CAANGGATAA AACGATNGGA TCGATCGCGA
GCAATTGCAG ATCTCCCGTG CANAATTTCT CAAATTNGGT GTTAACGCTG
GANAAATCCT ANAATGATAT CACCGATACA AACCATTCTC ATACATTCAC
AATCCTAATT TCTCTCTTTC TATCTCTCTC AAACANTGTA TAAAAATAGA
ATTGAAATTA TTAAAAAACA TTTAGATGTT AATAGTCAAA CAACAAATAA
TAAAAATGAA GTATTAGAAA AAGAATTATT TAATTCAATT GATGCAAATA
TAANTGTTGG AGAATTAAAA TTATTAATTG ATTCAGTTGA AGCAAGTAAA
TATANGGATG CAGCAAGAGA A--------- -AAGGTGATA ATACTGTTNT
CATGCAACAA TTGGCCAAGT ATTTATTAGG TGTAAAACAA AAACAAACAA
ATACCNCTAC CAATNGTATN TATTTAGATG GTGAANATGC CAAATCGTTA
TTACTCAATT TTTCAAATAT TAATCAATTA TTTGAAACTA NANAANAGAT
TNGTTTGGCC GAATTAAAAC AAATCATTAG CAACTTTAAA GAACCTGCTT
ATTTCGCTTT TAACAATGCA ATTCCATGGG CTGTCAAATT AGGTTTTGCT
CACATGACTA AAATCGTTTT CCAAAACTNT ATCAATACAT TAAAACTTAA
AAACGTTAAA CCATTAGCTC ATTTAATTAT GTTGGACGCT CTTGTNTCCA
TTGAANAANA TTTAGGTTGG TTCGTTTCAA ATCACTTAAT NTCACCAAAT
GTTGNTCAAT CAATCCCATT NTTAATTCAA GATNTTTGTT TTGAAGTTAC
CAAAGTTTCA AAACAAATCA TTGCTTCATT TGATATTCCT GAAAATTGTA
AACCATCGTC AAAAGATTTA ATTTCTGATC TTTTTTAAAA AAAAAAACCA
ATAATAATAA TAATAATAAT GGCTTTTTTT TCCAATTTAA TAATAAATAT
C

Translated Amino Acid Sequence VHO122

ixvflth*qhpslt*asslkcnvr*ntriifhsxgaislwqxikrxdrsraiadlpcxis
qixc*rwxnpxmispiqtilihsqs*FLSFYLSQTXYKNRIEIIKKHLDVNSQTTNNKNE
VLEKELFNSIDANIXVGELKLLIDSVEASKYXDAARE---

---GDNTVXMQQLAKYLLGVKQKQTNTXTNXXYLDGEXAKSLLLNFSNINQLFETXXXIX
LAELKQIISNFKEPAYFAFNNAIPWAVKLGFAHMTKIVFQNXINTLKLKNVKPLAHLIML
DALVSIEXXLGWFVSNHLXSPNVXQSIPXLIQDXCFEVTKVSKQIIASFDIPENCKPSSK
DLISDLF*kkkpiiiiiimaffsnliini

Homology VHO122 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHO122 (VHO122Q) /CSM/VH/VHO1-A/VHO122Q.Seq.d/                       1828   0.0
AFI302 (AFI302Q) /CSM/AF/AFI3-A/AFI302Q.Seq.d/                        926   0.0
AFM888 (AFM888Q) /CSM/AF/AFM8-D/AFM888Q.Seq.d/                        890   0.0
SLH686 (SLH686Q) /CSM/SL/SLH6-D/SLH686Q.Seq.d/                        837   0.0
CHI265 (CHI265Q) /CSM/CH/CHI2-C/CHI265Q.Seq.d/                        835   0.0
AHJ689 (AHJ689Q) /CSM/AH/AHJ6-D/AHJ689Q.Seq.d/                        835   0.0
CHS351 (CHS351Q) /CSM/CH/CHS3-C/CHS351Q.Seq.d/                        827   0.0
VHQ379 (VHQ379Q) /CSM/VH/VHQ3-D/VHQ379Q.Seq.d/                        825   0.0
CHN794 (CHN794Q) /CSM/CH/CHN7-D/CHN794Q.Seq.d/                        825   0.0
CHS141 (CHS141Q) /CSM/CH/CHS1-B/CHS141Q.Seq.d/                        801   0.0

Homology VHO122 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...   983   0.0    4
(BJ445326) Dictyostelium discoideum cDNA clone:ddv59k05, 3' ...   999   0.0    1
(BJ343740) Dictyostelium discoideum cDNA clone:dda17d01, 3' ...   892   0.0    2
(BJ347391) Dictyostelium discoideum cDNA clone:dda26p22, 3' ...   890   0.0    1
(BJ426476) Dictyostelium discoideum cDNA clone:ddv59k05, 5' ...   868   0.0    1
(AU039387) Dictyostelium discoideum slug cDNA, clone SLH686.      837   0.0    1
(BJ380534) Dictyostelium discoideum cDNA clone:ddc38a18, 3' ...   749   0.0    2
(BJ353582) Dictyostelium discoideum cDNA clone:dda50a24, 3' ...   835   0.0    1
(BJ386531) Dictyostelium discoideum cDNA clone:ddc58f13, 3' ...   827   0.0    1
(BJ446816) Dictyostelium discoideum cDNA clone:ddv63n19, 3' ...   825   0.0    1

Homology VHO122 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116979_33(AC116979|pid:none) Dictyostelium discoideum chromoso...   323   8e-87
AC116979_31(AC116979|pid:none) Dictyostelium discoideum chromoso...   315   4e-84
HB873049_1(HB873049|pid:none) Sequence 5724 from Patent EP209617...   315   4e-84
CP000656_2707(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c...    42   0.062
(O64894) RecName: Full=Acyl-coenzyme A oxidase, peroxisomal;    ...    40   0.18
AF051203_1(AF051203|pid:none) Picea mariana acyl-CoA oxidase hom...    40   0.18
AC117081_72(AC117081|pid:none) Dictyostelium discoideum chromoso...    37   1.5
CU458896_3560(CU458896|pid:none) Mycobacterium abscessus chromos...    37   2.0
CP002786_356(CP002786|pid:none) Amycolicicoccus subflavus DQS3-9...    35   7.5
CP002271_7116(CP002271|pid:none) Stigmatella aurantiaca DW4/3-1,...    35   9.8

Homology VHO122 vs Genome