Dictyostelium discoideum cDNA Clone VHN290

Sequence VHN290

TAATATTCCA AAGCATCCGT TTNATTAGAT CCACAAGATT TATNAACTTG
TCCATACCTT GCTTCTGATT TAGTCCATTG GCATAATCCA TCGACATGGT
CAAATAATCT CGTTCCACAA CCAAATGAAA ATATTACAAT TCCAGCCGGA
AAAAGAGTTT TAATTAGTCC ATGTTCAATT TCACAAACCG CAATTTACCA
AAGAATTGTT ATTCCAGCTA CAAGTGAATT AATTTTTGCT GATTCAAATT
TAACAATGAA TGTTAAAGAT ATCTTAGTAC AAGGTAAATT CATTATGGGA
ACTACAAAAT GTCGTTATAA TGCTAATATA AATATTATTT TCCATGGTTC
AAAAACAAAG GTTGATACTA TTGCACCATT TTATGGCTCT AAAGGTATTG
CTGTATCTGC TGGTGGTTTT ATTTCAGTTC ATGGTAAACA ATACCATAAT
TCATGGACAA AATTAGCATC AACTGTTTGG TCAGGTGATA GAATTATTTA
TGTTCAAGAT AATATTAATT GGGAAGTTGG CCAACAAGTT TTAATAACAA
CAAGTCAATT TAAAGATGAA ATAGATAATC AAAATGAAGT ATTAACAATT
AAATCAATAT TAGGAAAAGC TATTGAATTT ACTACCCCAA ----------
GGTCATAAGA TCGTTCCAGA TTCAGGATCA TCTAGATTCT TTAATTTCAT
CGATTGGGAT GGTTCATTAG TTGGTACACA TGTTCCAACT ATCGTTGGTT
CACATGAAAA ATGGTGGTCN TACGACGATA GTAAATGCAC ATACAACAAT
GACTGGACCA TTTGGGTATG TCAAAAAGGT AGCAAATCCG TTGGTAATAT
CGAATTTTGG GTACCAAATT TAATTATTCG TGGTGAACAA AACGAAGGTG
ATTCATTCGT TGGTAGTGTT AGTTTATTCG GTGATGGTAT CACTGATGTT
AGAAAGACAG CAATCACCCG TAATGCCGGT ATCACTGGTA TCACTAGCAC
AGGCTGGATG TTATGGTTAG ATGGTGGTTC ACCAACCTAT TTACAAGTTT
GGGCTGCCCA AGTCGCCTAT CAACAATATA TCTTTTTGGC AATTCCATAT
CCACCAGGTA CAACATTCAC CATTTCAACT GAAAATAAAT GGGCTTGGCA
AAATGCTTAT GGTTTCAATT GTACTCTTGC TTCATCTGCT GCTGAAGTTA
GAAGTAGTAA TGGAACCAAA TACTATTTCG ATCAAACTCA TTTATTCGTT
AAAATTGTTA ACCCAGTTTT AACAGGTTCT CCAGCTGAAT CTTTCAATAG
AGGTGGTACT AAAATTGATG ACGTTTATTG GGAATACATT TACCATATCA
ATGCTACAAA TCCAAATGTT TCTCCAAATC AAGA

Translated Amino Acid Sequence VHN290

*YSKASVXLDPQDLXTCPYLASDLVHWHNPSTWSNNLVPQPNENITIPAGKRVLISPCSI
SQTAIYQRIVIPATSELIFADSNLTMNVKDILVQGKFIMGTTKCRYNANINIIFHGSKTK
VDTIAPFYGSKGIAVSAGGFISVHGKQYHNSWTKLASTVWSGDRIIYVQDNINWEVGQQV
LITTSQFKDEIDNQNEVLTIKSILGKAIEFTTP---

---GHKIVPDSGSSRFFNFIDWDGSLVGTHVPTIVGSHEKWWSYDDSKCTYNNDWTIWVC
QKGSKSVGNIEFWVPNLIIRGEQNEGDSFVGSVSLFGDGITDVRKTAITRNAGITGITST
GWMLWLDGGSPTYLQVWAAQVAYQQYIFLAIPYPPGTTFTISTENKWAWQNAYGFNCTLA
SSAAEVRSSNGTKYYFDQTHLFVKIVNPVLTGSPAESFNRGGTKIDDVYWEYIYHINATN
PNVSPNQ

Homology VHN290 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHN290 (VHN290Q) /CSM/VH/VHN2-D/VHN290Q.Seq.d/                       2666   0.0
VHJ857 (VHJ857Q) /CSM/VH/VHJ8-C/VHJ857Q.Seq.d/                       1429   0.0
VHM312 (VHM312Q) /CSM/VH/VHM3-A/VHM312Q.Seq.d/                       1427   0.0
VHO882 (VHO882Q) /CSM/VH/VHO8-D/VHO882Q.Seq.d/                       1413   0.0
VHH761 (VHH761Q) /CSM/VH/VHH7-C/VHH761Q.Seq.d/                       1368   0.0
VSG382 (VSG382Q) /CSM/VS/VSG3-D/VSG382Q.Seq.d/                       1316   0.0
VHE678 (VHE678Q) /CSM/VH/VHE6-D/VHE678Q.Seq.d/                       1279   0.0
VSD475 (VSD475Q) /CSM/VS/VSD4-D/VSD475Q.Seq.d/                       1231   0.0
VSD791 (VSD791Q) /CSM/VS/VSD7-D/VSD791Q.Seq.d/                       1209   0.0
VHJ113 (VHJ113Q) /CSM/VH/VHJ1-A/VHJ113Q.Seq.d/                       1193   0.0

Homology VHN290 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ444895) Dictyostelium discoideum cDNA clone:ddv57c24, 3' ...  1445   0.0    1
(BJ442632) Dictyostelium discoideum cDNA clone:ddv50b16, 3' ...  1429   0.0    1
(BJ444060) Dictyostelium discoideum cDNA clone:ddv55h03, 3' ...  1427   0.0    1
(BJ445831) Dictyostelium discoideum cDNA clone:ddv60d22, 3' ...  1413   0.0    1
(BJ441410) Dictyostelium discoideum cDNA clone:ddv46j15, 3' ...  1368   0.0    1
(BJ439568) Dictyostelium discoideum cDNA clone:ddv40k20, 3' ...  1279   0.0    1
(BJ425998) Dictyostelium discoideum cDNA clone:ddv57c24, 5' ...  1257   0.0    1
(AU264096) Dictyostelium discoideum vegetative cDNA clone:VS...  1231   0.0    1
(AU264570) Dictyostelium discoideum vegetative cDNA clone:VS...  1209   0.0    1
(BJ442189) Dictyostelium discoideum cDNA clone:ddv49i03, 3' ...  1193   0.0    1

Homology VHN290 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54YG8) RecName: Full=Protein rliB; AltName: Full=Repressed aft...   493   e-138
AC116984_193(AC116984|pid:none) Dictyostelium discoideum chromos...   322   3e-86
(Q54XG9) RecName: Full=G8 domain-containing protein DDB_G0278975...   315   5e-84
(Q54L52) RecName: Full=G8 domain-containing protein DDB_G0286897...   314   6e-84
(Q54LY1) RecName: Full=G8 domain-containing protein DDB_G0286311...   307   1e-81
CP001576_63(CP001576|pid:none) Micromonas sp. RCC299 chromosome ...    89   7e-16
(Q54KF6) RecName: Full=Protein DDB_G0287365; Flags: Precursor;         77   2e-12
AY219181_1(AY219181|pid:none) Homo sapiens fibrocystin L mRNA, c...    75   1e-11
(Q86WI1) RecName: Full=Fibrocystin-L; AltName: Full=Polycystic k...    75   1e-11
FN357448_23(FN357448|pid:none) Schistosoma mansoni genome sequen...    75   1e-11

Homology VHN290 vs Genome