Homology VHN290 vs DNA
Query= VHN290 (VHN290Q) /CSM/VH/VHN2-D/VHN290Q.Seq.d/
(1384 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ444895) Dictyostelium discoideum cDNA clone:ddv57c24, 3' ... 1445 0.0 1
(BJ442632) Dictyostelium discoideum cDNA clone:ddv50b16, 3' ... 1429 0.0 1
(BJ444060) Dictyostelium discoideum cDNA clone:ddv55h03, 3' ... 1427 0.0 1
(BJ445831) Dictyostelium discoideum cDNA clone:ddv60d22, 3' ... 1413 0.0 1
(BJ441410) Dictyostelium discoideum cDNA clone:ddv46j15, 3' ... 1368 0.0 1
(BJ439568) Dictyostelium discoideum cDNA clone:ddv40k20, 3' ... 1279 0.0 1
(BJ425998) Dictyostelium discoideum cDNA clone:ddv57c24, 5' ... 1257 0.0 1
(AU264096) Dictyostelium discoideum vegetative cDNA clone:VS... 1231 0.0 1
(AU264570) Dictyostelium discoideum vegetative cDNA clone:VS... 1209 0.0 1
(BJ442189) Dictyostelium discoideum cDNA clone:ddv49i03, 3' ... 1193 0.0 1
(BJ443407) Dictyostelium discoideum cDNA clone:ddv52g20, 3' ... 1140 0.0 1
(BJ440239) Dictyostelium discoideum cDNA clone:ddv43g03, 3' ... 1140 0.0 1
(BJ440512) Dictyostelium discoideum cDNA clone:ddv43m23, 3' ... 1124 0.0 1
(BJ426949) Dictyostelium discoideum cDNA clone:ddv60d22, 5' ... 1005 0.0 1
(BJ424226) Dictyostelium discoideum cDNA clone:ddv51e19, 5' ... 1003 0.0 1
(BJ440600) Dictyostelium discoideum cDNA clone:ddv44n05, 3' ... 969 0.0 1
(BJ438775) Dictyostelium discoideum cDNA clone:ddv38n11, 3' ... 959 0.0 1
(AU266396) Dictyostelium discoideum vegetative cDNA clone:VS... 918 0.0 1
(AU266395) Dictyostelium discoideum vegetative cDNA clone:VS... 896 0.0 1
(BJ440151) Dictyostelium discoideum cDNA clone:ddv42e19, 3' ... 662 0.0 1
(BJ425098) Dictyostelium discoideum cDNA clone:ddv54j18, 5' ... 507 e-139 1
(BJ421896) Dictyostelium discoideum cDNA clone:ddv44n05, 5' ... 365 3e-96 1
(BJ444202) Dictyostelium discoideum cDNA clone:ddv55h17, 3' ... 256 2e-63 1
(C24368) Dictyostelium discoideum gamete cDNA, clone FC-AR02. 182 2e-41 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 129 2e-36 4
(AU271949) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 129 7e-35 2
(AU271948) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 129 7e-35 2
(AU271947) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 129 7e-35 2
(BJ425989) Dictyostelium discoideum cDNA clone:ddv57b20, 5' ... 82 1e-23 2
(BJ422135) Dictyostelium discoideum cDNA clone:ddv45a01, 5' ... 46 4e-19 6
(AU271950) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 44 1e-09 3
(BJ358589) Dictyostelium discoideum cDNA clone:ddc10h07, 5' ... 70 2e-07 1
(BJ334173) Dictyostelium discoideum cDNA clone:dda45k11, 5' ... 70 2e-07 1
(BJ419580) Dictyostelium discoideum cDNA clone:ddv36e15, 5' ... 48 3e-07 3
(BJ423709) Dictyostelium discoideum cDNA clone:ddv50k05, 5' ... 52 1e-06 2
(AY221643) Dictyostelium discoideum ComF (comF) gene, partia... 52 1e-06 2
(BJ325098) Dictyostelium discoideum cDNA clone:dda9m17, 5' e... 66 4e-06 1
(BJ421493) Dictyostelium discoideum cDNA clone:ddv42i20, 5' ... 46 3e-05 3
(BJ394307) Dictyostelium discoideum cDNA clone:dds34i16, 5' ... 62 6e-05 1
(BJ423642) Dictyostelium discoideum cDNA clone:ddv49m20, 5' ... 46 0.001 2
(BM162626) EST565149 PyBS Plasmodium yoelii yoelii cDNA clon... 34 0.62 3
(AR548885) Sequence 4016 from patent US 6747137. 48 0.90 1
(AE017321) Wolbachia endosymbiont strain TRS of Brugia malay... 48 0.90 1
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 34 3.5 22
(AC188767) Pan troglodytes BAC clone CH251-689I7 from chromo... 46 3.5 1
(ET632546) vpar_s_333 Veillonella parvula ATCC 17745 genomic... 46 3.5 1
(EJ687751) 1092955201533 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.5 1
(EI093016) hhe0007ce10.b1 hhe Oryza ridleyi genomic clone hh... 46 3.5 1
(DX353437) OR_ABa0286L06.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX353159) OR_ABa0286E15.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX348100) OR_ABa0278J11.r OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX342800) OR_ABa0270M22.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX341200) OR_ABa0268I11.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX339514) OR_ABa0266C23.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX331680) OR_ABa0254O03.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX323191) OR_ABa0242D13.r OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX319525) OR_ABa0237A20.r OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX318284) OR_ABa0235D13.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX315117) OR_ABa0230J07.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX304977) OR_ABa0215H03.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX298609) OR_ABa0205L10.r OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX284078) OR_ABa0185A01.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX277464) OR_ABa0175L14.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX276570) OR_ABa0174I02.r OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX274808) OR_ABa0172A24.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX270525) OR_ABa0166E09.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX267007) OR_ABa0161H12.r OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX262842) OR_ABa0155I12.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX256838) OR_ABa0147E12.r OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX256611) OR_ABa0146P08.r OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX254531) OR_ABa0143P09.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX254299) OR_ABa0143K05.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX253645) OR_ABa0142L18.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX245164) OR_ABa0130J16.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX243908) OR_ABa0128O06.r OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX238437) OR_ABa0121H13.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX237070) OR_ABa0119J08.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX231230) OR_ABa0111J05.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX230057) OR_ABa0109O18.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX221012) OR_ABa0097H11.r OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX205611) OR_ABa0076F11.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX196015) OR_ABa0063H03.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX189613) OR_ABa0054M19.r OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX184426) OR_ABa0047M12.r OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX180283) OR_ABa0042B16.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX176233) OR_ABa0036I17.r OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DX166934) OR_ABa0023L03.f OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(DU873605) 153241 Tomato HindIII BAC Library Solanum lycoper... 46 3.5 1
(CZ162660) OR_ABa0004G04.r OR_ABa Oryza ridleyi genomic clon... 46 3.5 1
(BZ445614) BONBV01TF BO_1.6_2_KB_tot Brassica oleracea genom... 46 3.5 1
(BH958617) odh87d10.g1 B.oleracea002 Brassica oleracea genom... 46 3.5 1
(AG393287) Mus musculus molossinus DNA, clone:MSMg01-211K06.... 46 3.5 1
(EL906933) INIT2_15_H04.b1_A006 G5 trophont cDNA (INIT2) Ich... 46 3.5 1
(EC820601) SME00001863 esmbsro2 Sawyeria marylandensis cDNA,... 46 3.5 1
(CF919240) Bflor531.000325 Amphioxus 26 hrs cDNA library (Na... 46 3.5 1
(BW638630) Dugesia ryukyuensis mRNA, clone: Dr_sW_012_C22, 5... 46 3.5 1
(BI388180) BFL26_002883 Amphioxus 26hr cDNA library (Name co... 46 3.5 1
(EV219578) 0134686 Brassica napus Root - drought Brassica na... 46 3.5 1
(CP000885) Clostridium phytofermentans ISDg, complete genome. 46 3.5 1
(AC196238) Gallus gallus chromosome 15 clone TAM31-55A3, ***... 34 6.6 2
>(BJ444895) Dictyostelium discoideum cDNA clone:ddv57c24, 3' end,
single read.
Length = 734
Score = 1445 bits (729), Expect = 0.0
Identities = 732/732 (100%)
Strand = Plus / Minus
Query: 653 tcataagatcgttccagattcaggatcatctagattctttaatttcatcgattgggatgg 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tcataagatcgttccagattcaggatcatctagattctttaatttcatcgattgggatgg 673
Query: 713 ttcattagttggtacacatgttccaactatcgttggttcacatgaaaaatggtggtcnta 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ttcattagttggtacacatgttccaactatcgttggttcacatgaaaaatggtggtcnta 613
Query: 773 cgacgatagtaaatgcacatacaacaatgactggaccatttgggtatgtcaaaaaggtag 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cgacgatagtaaatgcacatacaacaatgactggaccatttgggtatgtcaaaaaggtag 553
Query: 833 caaatccgttggtaatatcgaattttgggtaccaaatttaattattcgtggtgaacaaaa 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 caaatccgttggtaatatcgaattttgggtaccaaatttaattattcgtggtgaacaaaa 493
Query: 893 cgaaggtgattcattcgttggtagtgttagtttattcggtgatggtatcactgatgttag 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cgaaggtgattcattcgttggtagtgttagtttattcggtgatggtatcactgatgttag 433
Query: 953 aaagacagcaatcacccgtaatgccggtatcactggtatcactagcacaggctggatgtt 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aaagacagcaatcacccgtaatgccggtatcactggtatcactagcacaggctggatgtt 373
Query: 1013 atggttagatggtggttcaccaacctatttacaagtttgggctgcccaagtcgcctatca 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 atggttagatggtggttcaccaacctatttacaagtttgggctgcccaagtcgcctatca 313
Query: 1073 acaatatatctttttggcaattccatatccaccaggtacaacattcaccatttcaactga 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 acaatatatctttttggcaattccatatccaccaggtacaacattcaccatttcaactga 253
Query: 1133 aaataaatgggcttggcaaaatgcttatggtttcaattgtactcttgcttcatctgctgc 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaataaatgggcttggcaaaatgcttatggtttcaattgtactcttgcttcatctgctgc 193
Query: 1193 tgaagttagaagtagtaatggaaccaaatactatttcgatcaaactcatttattcgttaa 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tgaagttagaagtagtaatggaaccaaatactatttcgatcaaactcatttattcgttaa 133
Query: 1253 aattgttaacccagttttaacaggttctccagctgaatctttcaatagaggtggtactaa 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aattgttaacccagttttaacaggttctccagctgaatctttcaatagaggtggtactaa 73
Query: 1313 aattgatgacgtttattgggaatacatttaccatatcaatgctacaaatccaaatgtttc 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 aattgatgacgtttattgggaatacatttaccatatcaatgctacaaatccaaatgtttc 13
Query: 1373 tccaaatcaaga 1384
||||||||||||
Sbjct: 12 tccaaatcaaga 1
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,537,422,658
Number of extensions: 86989487
Number of successful extensions: 6542648
Number of sequences better than 10.0: 101
Length of query: 1384
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1360
Effective length of database: 97,308,875,965
Effective search space: 132340071312400
Effective search space used: 132340071312400
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home