Dictyostelium discoideum cDNA Clone VHM873

Sequence VHM873

AAAAAAATAA ACTTTAATTT AGATATAAAT GAATGTTCAA CTTCAAATGG
TGGTTGTGCT CATAATTGTG CAAATACAGC AGGTAGTTTC ACATGTTCTT
GTAGAGCAGG TTACACATTG AATAGTGATA AAAAATCTTG TACAGATATA
AATGAATGTT CAACTAATAA TGGTGGTTGT AATCAAGTTT GTACAAATTC
AGCAGGTAGT TTCGCATGTT CATGTANAGC AGGTTACACA TTAGGTACTG
ATAAAAAGAC TTGTGTAGAT ATAAATGAAT GTTCAACTAA TAATGGTGGT
TGTGCTCATA ATTGTGCAAA TACAGCAGGT AGTTTCACAT GTTCTTGTAN
AGCAGGTTAC ACATTGAATA NTGATAAAAA ATCTTGTACA GATATAAATG
AATGTTCAAC TAATAATGGT GGTTGTAATC AAGTTTGTAC AAATTCAGCA
GGTAGTTTCN CATGTTCATG TAATGCAGGT TATTCATTAG GTACTGATAA
AAAGACCTGT ACAGATATAA ATGAATGTTC AACTAATAAT GGTGGTTGTA
ATCAAGTTTG TACAAATTCA GCAGGTAGTT TCTCATGTTC ATGTAATTCA
GGTTATTCAT TAGGTACTGA TAAAAAGACT TGTGCAGATA TAAATGAATG
TTCACTAATA ATGGTGGTTG TAATCCAGTT TTGTACNAAT TCANCAGGNA
NTTTCTCATG TTCATGNAAT TCANGNTATT CATTTAGGAC CGGCCCAAAN
ATTTGNGCCN AAATAAATGA ATGTNCNCCT AATAATGGGN GGGTTGTAAT
NAAAATTNGN NCAAATNCNN NNGG------ ----TNGTAA TGATATAAAT
GAATGTTCAA CTAATAATGG CGGCTGTAGT CAAGTTTGTN CAAATNCAGC
AGGTAGTTTC TCATGTTCCA TGTAATTCAG GTTATTTATT GAGTACTGAT
AAAAAAGACT NGTACAGATA AAAATGAATG TTTAACTAAT AATGGTGGTT
GTACACAAGT TTGTACAAAT TCAGTTGGTA GTTTCTCATG TTCATGTAAT
TCAGGTTNTA TATTAAATTC AAATANATTA TCATGTGATG ATATAAATGA
ATGCGATCAA AAGATTTGTG NAACTGCAAA TTGCANTAAT ATACCAGGAA
GTTATCAATG TTCATGTCCA AGTGGTTATT CATTTACTGG TTCAGGTTGT
ATTGATATAG ATGAATGCGA TCAAAAGATT TGTGGCACTG CAAATTGTAC
AAATTCACCA GNAAGTTACC AATGTTCATG TCCAAGTGGT TACTCATTTA
CAGGTTCAAG TTGTATTGAT ATTGATGAAT GTTCTGCTGA TAATGGTGGT
TGCAGTCAAA TTTGTACAAA TTCAGTTGGT AGTTTCTCAT GTTCATGTAA
TTCAGGTTTT ACATTAAATT CAAATAAATT ATCATGTGAT GATATAAATG
AATGTGATCA AAATATTTGT GGAACTGCAA ATTGTGCAAA CTCTCCAGGA
AGTTATCAAT GTTCATGTCC AAATGGTTAC TCATTTACAG GTTCAGGTTG
TATCGATATT GATGAATGTT CTACNGATAA TGGTGGTTGT AGTCAAATTT
GTACAAATTC AGTGGTAGTT TCTCATGTTC ATGGATTCAG GT

Translated Amino Acid Sequence VHM873

KKINFNLDINECSTSNGGCAHNCANTAGSFTCSCRAGYTLNSDKKSCTDINECSTNNGGC
NQVCTNSAGSFACSCXAGYTLGTDKKTCVDINECSTNNGGCAHNCANTAGSFTCSCXAGY
TLNXDKKSCTDINECSTNNGGCNQVCTNSAGSFXCSCNAGYSLGTDKKTCTDINECSTNN
GGCNQVCTNSAGSFSCSCNSGYSLGTDKKTCADINECSLIMVVVIQFCTNSXGXFSCSXN
SXYSFRTGPXIXAXINECXPNNGXVVXKIXXNXX---

---XNDINECSTNNGGCSQVCXNXAGSFSCSM*frlfiey**krlvqikmnv*limvvvh
kfvqiqlvvshvhviqvxy*iqixyhvmi*mnaikrfvxlqiaxiyqevinvhvqvvihl
lvqvvli*mnaikrfvalqivqihqxvtnvhvqvvthlqvqvvlilmnvllimvvavkfv
qiqlvvshvhviqvlh*iqinyhvmi*mnvikifvelqivqtlqevinvhvqmvthlqvq
vvsilmnvlximvvvvkfvqiqw*flmfmdsg

Homology VHM873 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHM873 (VHM873Q) /CSM/VH/VHM8-D/VHM873Q.Seq.d/                       1544   0.0
VHI120 (VHI120Q) /CSM/VH/VHI1-A/VHI120Q.Seq.d/                       1459   0.0
VHO340 (VHO340Q) /CSM/VH/VHO3-B/VHO340Q.Seq.d/                         46   0.002
VHH326 (VHH326Q) /CSM/VH/VHH3-B/VHH326Q.Seq.d/                         46   0.002
VHE887 (VHE887Q) /CSM/VH/VHE8-D/VHE887Q.Seq.d/                         38   0.42
VHA317 (VHA317Q) /CSM/VH/VHA3-A/VHA317Q.Seq.d/                         38   0.42
SLK491 (SLK491Q) /CSM/SL/SLK4-D/SLK491Q.Seq.d/                         38   0.42
SLF523 (SLF523Q) /CSM/SL/SLF5-A/SLF523Q.Seq.d/                         38   0.42
SLF402 (SLF402Q) /CSM/SL/SLF4-A/SLF402Q.Seq.d/                         38   0.42
SHC305 (SHC305Q) /CSM/SH/SHC3-A/SHC305Q.Seq.d/                         38   0.42

Homology VHM873 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ444553) Dictyostelium discoideum cDNA clone:ddv56b20, 3' ...  1544   0.0    1
(BJ425753) Dictyostelium discoideum cDNA clone:ddv56b20, 5' ...  1449   0.0    1
(BJ441556) Dictyostelium discoideum cDNA clone:ddv47g05, 3' ...  1263   0.0    4
(BJ422228) Dictyostelium discoideum cDNA clone:ddv45d07, 5' ...    46   3e-10  5
(FC651941) CAXW12205.fwd CAXW Lottia gigantea from female go...    46   3e-09  3
(BJ417905) Dictyostelium discoideum cDNA clone:ddv31b05, 5' ...    38   5e-09  5
(BJ426563) Dictyostelium discoideum cDNA clone:ddv59p09, 5' ...    46   3e-08  5
(DY254679) PMAH-aaa56h05.b1 Lamprey_EST_Olfactory Petromyzon...    28   9e-08  8
(FD709228) CAAA1530.rev CAAA Petromyzon marinus Petromyzon m...    28   7e-07  8
(FD729238) CAAA9640.rev CAAA Petromyzon marinus Petromyzon m...    28   9e-07  8

Homology VHM873 vs Protein

Sequences producing significant alignments:                      (bits) Value


AB209735_1(AB209735|pid:none) Homo sapiens mRNA for fibrillin 2 ...   344   8e-93
U03272_1(U03272|pid:none) Human fibrillin-2 mRNA, complete cds.       343   2e-92
A54105(A54105;S17063;S31101)fibrillin-2 precursor - human             343   2e-92
(Q61555) RecName: Full=Fibrillin-2; Flags: Precursor;                 342   3e-92
AK220196_1(AK220196|pid:none) Mus musculus mRNA for mKIAA4226 pr...   342   3e-92
BC172946_1(BC172946|pid:none) Synthetic construct Mus musculus c...   342   3e-92
A57278(A57278) fibrillin-2 precursor - mouse  &L39790_1(L39790|p...   342   4e-92
AF135060_1(AF135060|pid:none) Rattus norvegicus fibrillin-2 mRNA...   341   6e-92
EU854565_1(EU854565|pid:none) Danio rerio fibrillin 4 (fbn4) mRN...   340   1e-91
L13923_1(L13923|pid:none) Homo sapiens fibrillin mRNA, complete ...   327   1e-87

Homology VHM873 vs Genome