Homology VHM686 vs DNA
Query= VHM686 (VHM686Q) /CSM/VH/VHM6-D/VHM686Q.Seq.d/
(1315 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ444600) Dictyostelium discoideum cDNA clone:ddv56k22, 3' ... 1419 0.0 2
(AY171066) Dictyostelium discoideum extrachromosomal palindr... 1102 0.0 1
(BJ425800) Dictyostelium discoideum cDNA clone:ddv56k22, 5' ... 1102 0.0 1
(BJ424142) Dictyostelium discoideum cDNA clone:ddv51c15, 5' ... 1102 0.0 1
(BJ422724) Dictyostelium discoideum cDNA clone:ddv46i20, 5' ... 1102 0.0 1
(BJ419516) Dictyostelium discoideum cDNA clone:ddv36h12, 5' ... 1102 0.0 1
(BJ418203) Dictyostelium discoideum cDNA clone:ddv32a06, 5' ... 1102 0.0 1
(BJ333041) Dictyostelium discoideum cDNA clone:dda41c11, 5' ... 1102 0.0 1
(BJ331324) Dictyostelium discoideum cDNA clone:dda34i23, 5' ... 1100 0.0 1
(BJ418485) Dictyostelium discoideum cDNA clone:ddv32m20, 5' ... 1098 0.0 1
(BJ397388) Dictyostelium discoideum cDNA clone:dds46j02, 5' ... 1098 0.0 1
(BJ422395) Dictyostelium discoideum cDNA clone:ddv45d21, 5' ... 1094 0.0 1
(BJ394149) Dictyostelium discoideum cDNA clone:dds33o24, 5' ... 1094 0.0 1
(X00601) Dictyostelium discoideum ribosomal RNA gene. 1086 0.0 1
(BJ367545) Dictyostelium discoideum cDNA clone:ddc43i03, 5' ... 1076 0.0 1
(BJ366728) Dictyostelium discoideum cDNA clone:ddc40e03, 5' ... 1076 0.0 1
(BJ394956) Dictyostelium discoideum cDNA clone:dds37j05, 5' ... 1074 0.0 1
(BJ424444) Dictyostelium discoideum cDNA clone:ddv52o12, 5' ... 1066 0.0 1
(BJ335031) Dictyostelium discoideum cDNA clone:dda48n13, 5' ... 1066 0.0 1
(BJ423451) Dictyostelium discoideum cDNA clone:ddv49b10, 5' ... 1065 0.0 1
(DQ340385) Dictyostelium citrinum 17S ribosomal RNA, 5.8S ri... 1055 0.0 1
(BJ392329) Dictyostelium discoideum cDNA clone:dds27c08, 5' ... 1051 0.0 2
(BJ421033) Dictyostelium discoideum cDNA clone:ddv41a16, 5' ... 1049 0.0 1
(BJ419847) Dictyostelium discoideum cDNA clone:ddv37m07, 5' ... 1039 0.0 1
(BJ368750) Dictyostelium discoideum cDNA clone:ddc47o23, 5' ... 1035 0.0 1
(BJ432234) Dictyostelium discoideum cDNA clone:ddv18h04, 3' ... 833 0.0 5
(DQ340386) Dictyostelium purpureum 17S ribosomal RNA, 5.8S r... 611 0.0 7
(BJ336984) Dictyostelium discoideum cDNA clone:dda55i20, 5' ... 1007 0.0 1
(BJ427898) Dictyostelium discoideum cDNA clone:ddv63p24, 5' ... 1005 0.0 1
(BJ420191) Dictyostelium discoideum cDNA clone:ddv38c18, 5' ... 989 0.0 1
(BJ423492) Dictyostelium discoideum cDNA clone:ddv49k09, 5' ... 975 0.0 1
(BJ396271) Dictyostelium discoideum cDNA clone:dds42f07, 5' ... 965 0.0 1
(BJ393300) Dictyostelium discoideum cDNA clone:dds30i20, 5' ... 848 0.0 3
(BJ419408) Dictyostelium discoideum cDNA clone:ddv36c05, 5' ... 955 0.0 1
(BJ444326) Dictyostelium discoideum cDNA clone:ddv56c03, 3' ... 886 0.0 1
(BJ443600) Dictyostelium discoideum cDNA clone:ddv53p10, 3' ... 884 0.0 1
(BJ443401) Dictyostelium discoideum cDNA clone:ddv52f20, 3' ... 884 0.0 1
(BJ443023) Dictyostelium discoideum cDNA clone:ddv51m16, 3' ... 884 0.0 1
(BJ442652) Dictyostelium discoideum cDNA clone:ddv50f17, 3' ... 884 0.0 1
(BJ438918) Dictyostelium discoideum cDNA clone:ddv38k22, 3' ... 884 0.0 1
(BJ438901) Dictyostelium discoideum cDNA clone:ddv38g23, 3' ... 884 0.0 1
(BJ406706) Dictyostelium discoideum cDNA clone:dds36m06, 3' ... 884 0.0 1
(BJ403693) Dictyostelium discoideum cDNA clone:dds25p20, 3' ... 884 0.0 1
(BJ402073) Dictyostelium discoideum cDNA clone:dds20l07, 3' ... 884 0.0 1
(BJ399314) Dictyostelium discoideum cDNA clone:dds5l09, 3' e... 884 0.0 1
(BJ380833) Dictyostelium discoideum cDNA clone:ddc39a15, 3' ... 884 0.0 1
(BJ379207) Dictyostelium discoideum cDNA clone:ddc34i06, 3' ... 884 0.0 1
(BJ377862) Dictyostelium discoideum cDNA clone:ddc26p02, 3' ... 884 0.0 1
(BJ359660) Dictyostelium discoideum cDNA clone:ddc15g21, 5' ... 884 0.0 1
(BJ352966) Dictyostelium discoideum cDNA clone:dda48c18, 3' ... 884 0.0 1
(BJ350613) Dictyostelium discoideum cDNA clone:dda40p09, 3' ... 884 0.0 1
(BJ350456) Dictyostelium discoideum cDNA clone:dda39m22, 3' ... 884 0.0 1
(BJ347181) Dictyostelium discoideum cDNA clone:dda26h12, 3' ... 884 0.0 1
(AU034938) Dictyostelium discoideum slug cDNA, clone SLE369. 882 0.0 1
(BJ444668) Dictyostelium discoideum cDNA clone:ddv57i02, 3' ... 882 0.0 1
(BJ428425) Dictyostelium discoideum cDNA clone:ddv11k24, 3' ... 882 0.0 1
(BJ348816) Dictyostelium discoideum cDNA clone:dda34p10, 3' ... 882 0.0 1
(BJ348941) Dictyostelium discoideum cDNA clone:dda34i23, 3' ... 880 0.0 1
(BJ385724) Dictyostelium discoideum cDNA clone:ddc55n23, 3' ... 878 0.0 1
(BJ446763) Dictyostelium discoideum cDNA clone:ddv63c23, 3' ... 876 0.0 1
(BJ443837) Dictyostelium discoideum cDNA clone:ddv54e09, 3' ... 876 0.0 1
(BJ441582) Dictyostelium discoideum cDNA clone:ddv47m02, 3' ... 876 0.0 1
(BJ435954) Dictyostelium discoideum cDNA clone:ddv29j05, 3' ... 874 0.0 1
(BJ443204) Dictyostelium discoideum cDNA clone:ddv52p05, 3' ... 872 0.0 1
(BJ380957) Dictyostelium discoideum cDNA clone:ddc39j19, 3' ... 870 0.0 1
(BJ446830) Dictyostelium discoideum cDNA clone:ddv63p24, 3' ... 868 0.0 1
(BJ440752) Dictyostelium discoideum cDNA clone:ddv44j13, 3' ... 868 0.0 1
(BJ440508) Dictyostelium discoideum cDNA clone:ddv43l23, 3' ... 868 0.0 1
(BJ440457) Dictyostelium discoideum cDNA clone:ddv43b24, 3' ... 868 0.0 1
(BJ438478) Dictyostelium discoideum cDNA clone:ddv37e06, 3' ... 868 0.0 1
(BJ438096) Dictyostelium discoideum cDNA clone:ddv36h12, 3' ... 868 0.0 1
(BJ409739) Dictyostelium discoideum cDNA clone:dds42g03, 3' ... 868 0.0 1
(BJ446798) Dictyostelium discoideum cDNA clone:ddv63j20, 3' ... 866 0.0 1
(BJ437973) Dictyostelium discoideum cDNA clone:ddv35p20, 3' ... 866 0.0 1
(BJ436548) Dictyostelium discoideum cDNA clone:ddv31b18, 3' ... 866 0.0 1
(BJ435127) Dictyostelium discoideum cDNA clone:ddv26n03, 3' ... 866 0.0 1
(BJ418767) Dictyostelium discoideum cDNA clone:ddv33m24, 5' ... 866 0.0 1
(BJ400355) Dictyostelium discoideum cDNA clone:dds9k23, 3' e... 866 0.0 1
(BJ384762) Dictyostelium discoideum cDNA clone:ddc50j16, 3' ... 866 0.0 1
(BJ384305) Dictyostelium discoideum cDNA clone:ddc49a03, 3' ... 866 0.0 1
(BJ382539) Dictyostelium discoideum cDNA clone:ddc45g02, 3' ... 866 0.0 1
(BJ440519) Dictyostelium discoideum cDNA clone:ddv43o19, 3' ... 860 0.0 1
(BJ445824) Dictyostelium discoideum cDNA clone:ddv60c19, 3' ... 858 0.0 1
(BJ443056) Dictyostelium discoideum cDNA clone:ddv51c23, 3' ... 858 0.0 1
(BJ443266) Dictyostelium discoideum cDNA clone:ddv52l12, 3' ... 856 0.0 1
(BJ436379) Dictyostelium discoideum cDNA clone:ddv31b01, 3' ... 856 0.0 1
(BJ442235) Dictyostelium discoideum cDNA clone:ddv49b10, 3' ... 848 0.0 1
(BJ441877) Dictyostelium discoideum cDNA clone:ddv48k05, 3' ... 848 0.0 1
(BJ441482) Dictyostelium discoideum cDNA clone:ddv46i20, 3' ... 848 0.0 1
(BJ438448) Dictyostelium discoideum cDNA clone:ddv37p24, 3' ... 848 0.0 1
(BJ437331) Dictyostelium discoideum cDNA clone:ddv33m24, 3' ... 848 0.0 1
(BJ400377) Dictyostelium discoideum cDNA clone:dds9p23, 3' e... 848 0.0 1
(BJ356681) Dictyostelium discoideum cDNA clone:dda61i04, 3' ... 848 0.0 1
(BJ357767) Dictyostelium discoideum cDNA clone:dda64k18, 3' ... 846 0.0 1
(BJ441136) Dictyostelium discoideum cDNA clone:ddv45d21, 3' ... 835 0.0 2
(BJ437788) Dictyostelium discoideum cDNA clone:ddv35j11, 3' ... 844 0.0 1
(BJ381011) Dictyostelium discoideum cDNA clone:ddc40e03, 3' ... 844 0.0 1
(BJ446153) Dictyostelium discoideum cDNA clone:ddv61g19, 3' ... 835 0.0 2
(BJ348300) Dictyostelium discoideum cDNA clone:dda32e23, 3' ... 827 0.0 2
(BJ435467) Dictyostelium discoideum cDNA clone:ddv27p04, 3' ... 842 0.0 1
>(BJ444600) Dictyostelium discoideum cDNA clone:ddv56k22, 3' end,
single read.
Length = 749
Score = 1419 bits (716), Expect(2) = 0.0
Identities = 716/716 (100%)
Strand = Plus / Minus
Query: 567 cgtgagacaggttagttttaccctactgttgtcaattgtttgcgtaatagtagcatgatt 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 cgtgagacaggttagttttaccctactgttgtcaattgtttgcgtaatagtagcatgatt 690
Query: 627 tagtacgagaggaactgtcatgccggatcactggtctgtaggtttatttgacaaaatagt 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tagtacgagaggaactgtcatgccggatcactggtctgtaggtttatttgacaaaatagt 630
Query: 687 gacctgccgctaccatccgttggataatggctgaacgcctctaagtcagaatccattcta 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gacctgccgctaccatccgttggataatggctgaacgcctctaagtcagaatccattcta 570
Query: 747 gaaacgcaaaccaaatgctttagagtgtgaatgttgtaggtaacattaggttgttggtgg 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gaaacgcaaaccaaatgctttagagtgtgaatgttgtaggtaacattaggttgttggtgg 510
Query: 807 gggaccactttcaactttaaaccatatgattaatcgctgttacactgcagtttccttccg 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gggaccactttcaactttaaaccatatgattaatcgctgttacactgcagtttccttccg 450
Query: 867 gttattgtggtgggtggctaaattctaatttatatcctcgttccgctcaactcttcgatt 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gttattgtggtgggtggctaaattctaatttatatcctcgttccgctcaactcttcgatt 390
Query: 927 gtagacgactatcaaatgaactaggtgctgtaagcttccgagtagcgttcagttacgagg 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gtagacgactatcaaatgaactaggtgctgtaagcttccgagtagcgttcagttacgagg 330
Query: 987 ggttgaggcttttccattagttcttacataagatttcataaaatgactaaaggtacattc 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggttgaggcttttccattagttcttacataagatttcataaaatgactaaaggtacattc 270
Query: 1047 agttttggtcgtagacacaccaagtcccacaccttatgcagaagatgcggtaaatcatca 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agttttggtcgtagacacaccaagtcccacaccttatgcagaagatgcggtaaatcatca 210
Query: 1107 ttccacatccaaaagaagacctgtgcttcatgtggttatccatccgccaaaaccagatct 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ttccacatccaaaagaagacctgtgcttcatgtggttatccatccgccaaaaccagatct 150
Query: 1167 tacaactggagtattaaagctcaacgtagaaagaccaccggtaccggtagaaccagatat 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tacaactggagtattaaagctcaacgtagaaagaccaccggtaccggtagaaccagatat 90
Query: 1227 ttgaagactgtccacaagagattcaacagggtttcaaagaagcctctttagccgtc 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ttgaagactgtccacaagagattcaacagggtttcaaagaagcctctttagccgtc 34
Score = 46.1 bits (23), Expect(2) = 0.0
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1290 ctgcgcnaataataaaatcttcaaat 1315
||||||||||||||||||||||||||
Sbjct: 26 ctgcgcnaataataaaatcttcaaat 1
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,171,226,066
Number of extensions: 64275406
Number of successful extensions: 4624592
Number of sequences better than 10.0: 153858
Length of query: 1315
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1291
Effective length of database: 97,308,875,965
Effective search space: 125625758870815
Effective search space used: 125625758870815
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home