Dictyostelium discoideum cDNA Clone VHM640

Sequence VHM640

TTACAACAGT GATAAACTAA TAGACTTTCG GGTTTTACCT TTTGGATAAC
CGCAGTAAAT CGGGGCTAAT ACATACAAGC GATGGGTGAC TGGCAACGGA
AGCTCAGCGA TTATTAGCAT TCTACCAATG CCTTCGGGTT TTGGGTGATA
CCGAATAATA TTGCAGATCG AGGATTTATC TTCGACAAGT CTACTGTGTC
ACTGCCCTAT CAACTTTCGA TGGTACGGTA TTGGCCTACC ATGGTTGTAA
CGGGTAACGG GGAATTAGGG TTCGATTCCG GAGAGGGAGC CTGAGAAATG
GCTACCACTT CTACGGAAGG CAGCAGGCGC GCAAATTACT CAATCCCAAT
ACGGGGAAGT AGTGACAATA AATATCAATA CCTATCCTTT TTGGAGGGCA
ATTGAAATGA ACACAAATTA AAACTCTTAA TTAACACAAT TGGAGGGCAA
GTCTGGTGCC AGCAGCCGCG GTAATTCCAG CTCCAATAGC ATATACTAAA
GTTGTTGCAG TTAAAAAGCT CGTAGTTGAA GTTTAAGGTT TACCGGGTTT
ATGTCATTTA CCACTTCGTG GTTAAATCGA CACCGGTATC TCTTTCTTAA
T--------- -TTCATGATT CTATAAGTGG TGGTGCATGG TCGTTCTTAG
TTGGTGGAGC GATTTGTCTG GTCAATTCCG ATAACGGACG AGACCTCGAC
CCTGCTAACT AGTAGTATTT ATTAGTCGAT ATAGACGATA GCTTTTCTGG
GGTTTGGAAT GATTTCGGTC ATCTCCTGCT TCAAGGAGTG TGTAGTCTGA
CTCGATAGGT ACGAATTAAA ACTTCTTAGA GGGACTACCT GCCTCAAGCA
GGCGGAAGTC CGAGGCAATA ACAGGTCTGT GATGCCCTTA GATACCTTGG
GCCGCACGCG CGCTACAATG TAGGAAACAA AAAGGCTCCT GGTCCGGAAG
GATTGGGTAA TCATTTGAAT TTCCTACGTA ACTGGGCTTG ATCTTTGTAA
TTATTGATCA TAAACGAGGA ATTCCTTGTA AGCGTAAGTC ATTACCTTAT
GCTGAATATG TCCCTGCCCT TTGTACACAC CGCCCGTCGC TCCTACCGAT
CGAATGATAC GGTAAAGTTA ACGGATCGTT TTATCNTGTG GCAACACNTG
ATATAAATTA AAAGTTATTT AAATCTCATT GTTTAGAGGA AGGAGAAGTC
GTAACAAGGT ATCCGTAGGA ACCTGCGGAT GGATCATTTT TTATCTTAAT
ATCATAAACT TTATGTTTTT TGGATAATGG AACTGCTTGC GTATAAAGAA
ATTAGGCTTT TAATTAAGGT TTAAGAGTAA GTGGGCTGTC AGATT

Translated Amino Acid Sequence VHM640

ynsdklidfrvlpfg*pq*igantykrwvtgngssaiisilpmpsgfg*yriilqiedls
stsllchcpinfrwygiglpwl*rvtgn*gsiperepekwlpllrkaagaqitqsqygev
vtinintypfwraiemntn*ns*ltqlegksgassrgnsssnsiy*sccs*kars*SLRF
TGFMSFTTSWLNRHRYLFLN---

---HDSISGGAWSFLVGGAICLVNSDNGRDLDPAN**yllvdiddsfsgvwndfghlllq
gvcsltr*vrikts*rdylpqaggsprq*qvcdalrylgpharynvgnkkapgpeglgnh
lnflrnwa*sl*lliineeflvsvshylmlnmslpfvhtarrsyrsndtvkltdrfixwq
hxi*iksylnliv*rkeks*qgirrnlrmdhfls*yhklyvfwimellaykeirllikv*
e*vgcqi

Homology VHM640 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHM640 (VHM640Q) /CSM/VH/VHM6-B/VHM640Q.Seq.d/                       2595   0.0
VHJ647 (VHJ647Q) /CSM/VH/VHJ6-B/VHJ647Q.Seq.d/                       1344   0.0
AHO642 (AHO642Q) /CSM/AH/AHO6-B/AHO642Q.Seq.d/                       1342   0.0
FC-AG24 (FC-AG24Q) /CSM/FC/FC-AG/FC-AG24Q.Seq.d/                     1340   0.0
VFM557 (VFM557Q) /CSM/VF/VFM5-C/VFM557Q.Seq.d/                       1328   0.0
VHL415 (VHL415Q) /CSM/VH/VHL4-A/VHL415Q.Seq.d/                       1320   0.0
VHA586 (VHA586Q) /CSM/VH/VHA5-D/VHA586Q.Seq.d/                       1316   0.0
VHE244 (VHE244Q) /CSM/VH/VHE2-B/VHE244Q.Seq.d/                       1275   0.0
VHK334 (VHK334Q) /CSM/VH/VHK3-B/VHK334Q.Seq.d/                       1261   0.0
VHK855 (VHK855Q) /CSM/VH/VHK8-C/VHK855Q.Seq.d/                       1259   0.0

Homology VHM640 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ444463) Dictyostelium discoideum cDNA clone:ddv56o10, 3' ...  1443   0.0    1
(AY171066) Dictyostelium discoideum extrachromosomal palindr...  1191   0.0    1
(AM168071) Dictyostelium discoideum 18S rRNA gene, isolate NC4.  1191   0.0    1
(BJ425666) Dictyostelium discoideum cDNA clone:ddv56o10, 5' ...  1191   0.0    1
(BJ333974) Dictyostelium discoideum cDNA clone:dda44n15, 5' ...  1191   0.0    1
(K02641) Slime mold (D.discoideum) 17S small subunit ribosom...  1183   0.0    1
(X00134) Dictyostelium discoideum 17S rRNA sequence.             1179   0.0    1
(AM168040) Dictyostelium discoideum 18S rRNA gene, isolate 9...  1179   0.0    1
(BJ412920) Dictyostelium discoideum cDNA clone:ddv13k11, 5' ...  1118   0.0    1
(BJ423187) Dictyostelium discoideum cDNA clone:ddv48h12, 5' ...  1112   0.0    1

Homology VHM640 vs Protein

Sequences producing significant alignments:                      (bits) Value


JF284509_1(JF284509|pid:none) Cherax quadricarinatus clone v1-18...    64   3e-08
AF421549_1(AF421549|pid:none) Gallus gallus CDH1-D mRNA, partial...    63   3e-08
AM462492_6(AM462492|pid:none) Vitis vinifera contig VV78X177628....    63   3e-08
BT099075_1(BT099075|pid:none) Soybean clone JCVI-FLGm-16H4 unkno...    59   8e-08
EU979522_1(EU979522|pid:none) Ornithoctonus huwena clone HWEco7 ...    59   8e-07
FP929128_287(FP929128|pid:none) Leptosphaeria maculans JN3 lm_Su...    55   7e-06
CP003008_93(CP003008|pid:none) Myceliophthora thermophila ATCC 4...    47   1e-05
JN216970_1(JN216970|pid:none) Epinephelus bruneus clone JKJRRC00...    53   4e-05
AY914930_1(AY914930|pid:none) Schistosoma japonicum SJCHGC01014 ...    52   6e-05
EU955514_1(EU955514|pid:none) Zea mays clone 1535262 hypothetica...    50   2e-04

Homology VHM640 vs Genome