Dictyostelium discoideum cDNA Clone VHM318

Sequence VHM318

ATATATATAT GTATATTTTC AACAAATAAA AACAAATATT TATGGCACAT
ATATTGCAAA AAGATAAAAG GTTCTTTTTA TATCAAGAAC CTCCTCCTGG
GTATATTGCT GGCTTTGGTA GAGGGGCAGT TGGTTTTACA ACTAGATTAG
ATATTGGTAC AGCAAGAAAT TCAGATATTC CAGGATTTCC AGGTAGAGAT
GATAAATCAA AATTAACATC AAATACAGGT GGAGAAGATG AGGATGAAGA
TGAACAATCA AATAAAGGTG GTGGTGGTGG TGATAATGGT AGATTTGATG
AATTTGAAGG TAGTTCAACT GATAAATTAT TTGATTCAAA TAAAGGTTAT
GATCAAGAAG ATAAAGACGC AGATGCAATT TGGGATGCAA TTGATAGTAA
AATGGATTCA CCGTAGAAAA AAGAAACGTG AAGCAAATGA ACAATTAAAA
ATTGAGAAAC AACGTGAATC AAGACCAAAA ATTCAACAAC ATTTACAAGA
TCTTAAACAG GATTTAGCAA CAGTCTCT-- --------

Translated Amino Acid Sequence VHM318

iymyifnk*KQIFMAHILQKDKRFFLYQEPPPGYIAGFGRGAVGFTTRLDIGTARNSDIP
GFPGRDDKSKLTSNTGGEDEDEDEQSNKGGGGGDNGRFDEFEGSSTDKLFDSNKGYDQED
KDADAIWDAIDSKMDSP*kket*sk*tikn*ett*iktknsttftrs*tgfsnsl---

Homology VHM318 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHM318 (VHM318Q) /CSM/VH/VHM3-A/VHM318Q.Seq.d/                        924   0.0
VHM240 (VHM240Q) /CSM/VH/VHM2-B/VHM240Q.Seq.d/                        170   1e-41
SHH457 (SHH457Q) /CSM/SH/SHH4-C/SHH457Q.Seq.d/                         48   1e-04
SHE722 (SHE722Q) /CSM/SH/SHE7-A/SHE722Q.Seq.d/                         48   1e-04
CHN862 (CHN862Q) /CSM/CH/CHN8-C/CHN862Q.Seq.d/                         48   1e-04
CHH484 (CHH484Q) /CSM/CH/CHH4-D/CHH484Q.Seq.d/                         48   1e-04
AFL219 (AFL219Q) /CSM/AF/AFL2-A/AFL219Q.Seq.d/                         48   1e-04
VSC812 (VSC812Q) /CSM/VS/VSC8-A/VSC812Q.Seq.d/                         44   0.002
SHD769 (SHD769Q) /CSM/SH/SHD7-C/SHD769Q.Seq.d/                         44   0.002
SHA694 (SHA694Q) /CSM/SH/SHA6-D/SHA694Q.Seq.d/                         44   0.002

Homology VHM318 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ425229) Dictyostelium discoideum cDNA clone:ddv55d05, 5' ...   924   0.0    1
(AC114265) Dictyostelium discoideum chromosome 2 map 4520461...   571   0.0    3
(BJ425353) Dictyostelium discoideum cDNA clone:ddv55o10, 5' ...   170   3e-38  1
(AC163218) Mus musculus chromosome 7, clone RP24-102H24, com...    52   0.003  2
(EF106748) Asterinidae mixed genomic library microsatellite ...    54   0.005  1
(EK340971) 1095467061009 Global-Ocean-Sampling_GS-31-01-01-1...    54   0.005  1
(FC776272) CBBN9941.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv...    34   0.011  3
(FC678998) CAXX12911.fwd CAXX Lottia gigantea from male gona...    34   0.012  3
(AC097740) Rattus norvegicus clone CH230-6M16, *** SEQUENCIN...    36   0.014  2
(AC124018) Rattus norvegicus clone CH230-122G8, WORKING DRAF...    36   0.014  2

Homology VHM318 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC114265_2(AC114265|pid:none) Dictyostelium discoideum chromosom...   192   8e-65
CU928167_310(CU928167|pid:none) Kluyveromyces thermotolerans str...    62   2e-08
AM452165_1(AM452165|pid:none) Vitis vinifera contig VV78X185891....    58   2e-07
AK369516_1(AK369516|pid:none) Hordeum vulgare subsp. vulgare mRN...    56   1e-06
CR858352_1(CR858352|pid:none) Pongo abelii mRNA; cDNA DKFZp459N2...    55   2e-06
AK145461_1(AK145461|pid:none) Mus musculus 1 cell embryo 1 cell ...    55   2e-06
CQ834640_1(CQ834640|pid:none) Sequence 511 from Patent WO2004058...    55   2e-06
AK001554_1(AK001554|pid:none) Homo sapiens cDNA FLJ10692 fis, cl...    55   2e-06
AX885267_1(AX885267|pid:none) Sequence 1130 from Patent EP1033401.     55   2e-06
(O94906) RecName: Full=Pre-mRNA-processing factor 6; AltName: Fu...    55   2e-06

Homology VHM318 vs Genome