Homology VHM318 vs DNA
Query= VHM318 (VHM318Q) /CSM/VH/VHM3-A/VHM318Q.Seq.d/
(538 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ425229) Dictyostelium discoideum cDNA clone:ddv55d05, 5' ... 924 0.0 1
(AC114265) Dictyostelium discoideum chromosome 2 map 4520461... 571 0.0 3
(BJ425353) Dictyostelium discoideum cDNA clone:ddv55o10, 5' ... 170 3e-38 1
(AC163218) Mus musculus chromosome 7, clone RP24-102H24, com... 52 0.003 2
(EF106748) Asterinidae mixed genomic library microsatellite ... 54 0.005 1
(EK340971) 1095467061009 Global-Ocean-Sampling_GS-31-01-01-1... 54 0.005 1
(FC776272) CBBN9941.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 34 0.011 3
(FC678998) CAXX12911.fwd CAXX Lottia gigantea from male gona... 34 0.012 3
(AC097740) Rattus norvegicus clone CH230-6M16, *** SEQUENCIN... 36 0.014 2
(AC124018) Rattus norvegicus clone CH230-122G8, WORKING DRAF... 36 0.014 2
(AC128744) Rattus norvegicus clone CH230-451H20, *** SEQUENC... 36 0.014 2
(AC113115) Mus musculus chromosome 7, clone RP23-338L5, comp... 52 0.021 1
(AC107658) Mus musculus clone RP23-142C9, LOW-PASS SEQUENCE ... 52 0.021 1
(BG664572) DRABFF01 Rat DRG Library Rattus norvegicus cDNA c... 52 0.021 1
(AP010292) Lotus japonicus genomic DNA, chromosome 1, clone:... 36 0.053 2
(AP010293) Lotus japonicus genomic DNA, chromosome 1, clone:... 36 0.053 2
(AU251819) Lotus japonicus flower bud cDNA clone: LjImfb-E95. 38 0.067 2
(AC192999) Pan troglodytes BAC clone CH251-587P5 from chromo... 50 0.082 1
(AC113615) Homo sapiens BAC clone RP11-586D19 from 4, comple... 50 0.082 1
(AC024952) Homo sapiens chromosome 7 clone RP11-66F23, compl... 50 0.082 1
(AC018638) Homo sapiens chromosome 7 clone RP11-274B21, comp... 50 0.082 1
(AC146374) Pan troglodytes chromosome UNK clone RP43-63O16, ... 50 0.082 1
(AC135837) Papio anubis clone RP41-316H21, WORKING DRAFT SEQ... 50 0.082 1
(AC132051) Rattus norvegicus clone CH230-138P5, *** SEQUENCI... 50 0.082 1
(AC126141) Rattus norvegicus clone CH230-78O2, *** SEQUENCIN... 50 0.082 1
(AC116931) Papio anubis clone RP41-152L1, WORKING DRAFT SEQU... 50 0.082 1
(AC116435) Pan troglodytes clone RP43-152C2, WORKING DRAFT S... 50 0.082 1
(AC074373) Homo sapiens chromosome UNK clone RP11-638M14, WO... 50 0.082 1
(CU468945) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.082 1
(CU041352) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.082 1
(CC096416) CSU-K34.103A9.T7 CSU-K34 Aedes aegypti genomic cl... 50 0.082 1
(CC093916) CSU-K34.101D18.SP6 CSU-K34 Aedes aegypti genomic ... 50 0.082 1
(CF658273) tac63c10.y1 Hydra EST -IV Hydra magnipapillata cD... 50 0.082 1
(CF227876) PtaXM0005G4G0414 Poplar cDNA library from mature ... 50 0.082 1
(FC847100) CBHN4576.fwd CBHN Metridium senile tentacle Metri... 50 0.082 1
(AC164490) Pan troglodytes clone CH251-378P9, WORKING DRAFT ... 44 0.091 4
(AC196669) Macaca mulatta clone CH250-215N15, WORKING DRAFT ... 44 0.095 4
(AC172402) Strongylocentrotus purpuratus clone R3-14C23, WOR... 44 0.11 3
(EY375658) CAXA15744.fwd CAXA Helobdella robusta Subtracted ... 40 0.12 2
(BH515287) BOGOI55TF BOGO Brassica oleracea genomic clone BO... 34 0.15 3
(EH733876) CNMM6659.b1_F09.ab1 CNM(LMS) spotted knapweed Cen... 38 0.16 2
(AC096418) Rattus norvegicus clone CH230-74I16, WORKING DRAF... 34 0.19 2
(AC127283) Mus musculus BAC clone RP23-323E20 from chromosom... 36 0.19 2
(AC220423) Bos taurus clone CH240-358M5, WORKING DRAFT SEQUE... 34 0.19 2
(AC132946) Mus musculus BAC clone RP24-343E19 from chromosom... 36 0.19 2
(CU326392) Medicago truncatula chromosome 5 clone mth2-42c9,... 34 0.19 2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 34 0.21 6
(EF128059) Medicago truncatula class II KNOX homeobox transc... 34 0.24 2
(FE774986) CCAG7996.g1 CCAG Petrolisthes cinctipes heart, gi... 34 0.24 2
(FE774985) CCAG7996.b3 CCAG Petrolisthes cinctipes heart, gi... 34 0.24 2
(CA990608) EST644116 GESD Medicago truncatula cDNA clone GES... 34 0.24 2
(AC155919) Medicago truncatula chromosome 6 clone mth2-119h1... 36 0.25 4
(CD861280) WP.010C06F010807 WP Pisum sativum cDNA clone WP01... 34 0.25 2
(BZ845138) CH240_215F4.TJ CHORI-240 Bos taurus genomic clone... 34 0.25 2
(AL928974) Mouse DNA sequence from clone RP23-56C2 on chromo... 48 0.32 1
(AL732527) Mouse DNA sequence from clone RP23-259B18 on chro... 48 0.32 1
(AL713853) Mouse DNA sequence from clone RP23-63C10 on chrom... 48 0.32 1
(AC157596) Mus musculus BAC clone RP23-240B9 from chromosome... 48 0.32 1
(AC142454) Mus musculus BAC clone RP23-313G1 from chromosome... 48 0.32 1
(AC139360) Mus musculus chromosome 3, clone RP23-324F4, comp... 48 0.32 1
(AC138677) Mus musculus chromosome 8, clone RP23-366O14, com... 48 0.32 1
(AC134909) Mus musculus chromosome 3 clone RP23-402O2, compl... 48 0.32 1
(AC126460) Mus musculus BAC clone RP23-187E3 from 3, complet... 48 0.32 1
(AC115904) Mus musculus chromosome 16, clone RP24-472P22, co... 48 0.32 1
(AC113484) Mus musculus chromosome 8, clone RP23-343H23, com... 48 0.32 1
(AC109244) Mus musculus chromosome 15, clone RP23-459E13, co... 48 0.32 1
(AC174482) Pan troglodytes BAC clone CH251-527O19 from chrom... 48 0.32 1
(AC147154) Pan troglodytes BAC clone CH251-175E24 from Y, co... 48 0.32 1
(AC147140) Pan troglodytes BAC clone CH251-329N7 from Y, com... 48 0.32 1
(AC147119) Pan troglodytes BAC clone CH251-518N19 from Y, co... 48 0.32 1
(AC146246) Pan troglodytes BAC clone clone CH251-154C4 from ... 48 0.32 1
(U20432) Dictyostelium discoideum TagB (tagB) gene, complete... 48 0.32 1
(DQ009672) Homo sapiens v-abl Abelson murine leukemia viral ... 48 0.32 1
(AL356984) Human DNA sequence from clone RP11-333E3 on chrom... 48 0.32 1
(AL139132) Human DNA sequence from clone RP11-177A2 on chrom... 48 0.32 1
(AL136307) Human DNA sequence from clone RP3-380B8 on chromo... 48 0.32 1
(AC092437) Homo sapiens BAC clone RP11-326I19 from 4, comple... 48 0.32 1
(AC015978) Homo sapiens BAC clone RP11-529I21 from Y, comple... 48 0.32 1
(AC007241) Homo sapiens BAC clone RP11-157F24 from Y, comple... 48 0.32 1
(AC004169) Homo sapiens chromosome 4 clone C0236G06 map 4p16... 48 0.32 1
(AC159951) Dasypus novemcinctus clone VMRC5-107F3, WORKING D... 48 0.32 1
(AC143837) Macaca mulatta clone CH250-268K14, WORKING DRAFT ... 48 0.32 1
(AC137389) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 48 0.32 1
(AC137388) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 48 0.32 1
(AC132017) Rattus norvegicus clone CH230-274A12, WORKING DRA... 48 0.32 1
(AC128474) Rattus norvegicus clone CH230-51A3, *** SEQUENCIN... 48 0.32 1
(AC128425) Rattus norvegicus clone CH230-110N11, WORKING DRA... 48 0.32 1
(AC119772) Rattus norvegicus clone CH230-390M12, WORKING DRA... 48 0.32 1
(AC117551) Mus musculus clone RP23-80N8, WORKING DRAFT SEQUE... 48 0.32 1
(AC114754) Homo sapiens chromosome 4 clone RP11-274B16, WORK... 48 0.32 1
(AC112881) Rattus norvegicus clone CH230-51C15, WORKING DRAF... 48 0.32 1
(AC111948) Rattus norvegicus clone CH230-212L12, WORKING DRA... 48 0.32 1
(AC107986) Homo sapiens chromosome 18 clone CTD-3040O20 map ... 48 0.32 1
(AC103306) Rattus norvegicus clone CH230-146D4, *** SEQUENCI... 48 0.32 1
(AC099207) Rattus norvegicus clone CH230-132D18, WORKING DRA... 48 0.32 1
(AC098900) Rattus norvegicus clone CH230-57B1, *** SEQUENCIN... 48 0.32 1
(AC098321) Rattus norvegicus clone CH230-1M1, WORKING DRAFT ... 48 0.32 1
(AC098215) Rattus norvegicus clone CH230-111K1, *** SEQUENCI... 48 0.32 1
(AC096987) Rattus norvegicus clone CH230-24O20, WORKING DRAF... 48 0.32 1
(AC096084) Rattus norvegicus clone CH230-16I22, WORKING DRAF... 48 0.32 1
>(BJ425229) Dictyostelium discoideum cDNA clone:ddv55d05, 5' end,
single read.
Length = 528
Score = 924 bits (466), Expect = 0.0
Identities = 466/466 (100%)
Strand = Plus / Plus
Query: 63 gataaaaggttctttttatatcaagaacctcctcctgggtatattgctggctttggtaga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gataaaaggttctttttatatcaagaacctcctcctgggtatattgctggctttggtaga 122
Query: 123 ggggcagttggttttacaactagattagatattggtacagcaagaaattcagatattcca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ggggcagttggttttacaactagattagatattggtacagcaagaaattcagatattcca 182
Query: 183 ggatttccaggtagagatgataaatcaaaattaacatcaaatacaggtggagaagatgag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ggatttccaggtagagatgataaatcaaaattaacatcaaatacaggtggagaagatgag 242
Query: 243 gatgaagatgaacaatcaaataaaggtggtggtggtggtgataatggtagatttgatgaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gatgaagatgaacaatcaaataaaggtggtggtggtggtgataatggtagatttgatgaa 302
Query: 303 tttgaaggtagttcaactgataaattatttgattcaaataaaggttatgatcaagaagat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tttgaaggtagttcaactgataaattatttgattcaaataaaggttatgatcaagaagat 362
Query: 363 aaagacgcagatgcaatttgggatgcaattgatagtaaaatggattcaccgtagaaaaaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aaagacgcagatgcaatttgggatgcaattgatagtaaaatggattcaccgtagaaaaaa 422
Query: 423 gaaacgtgaagcaaatgaacaattaaaaattgagaaacaacgtgaatcaagaccaaaaat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaaacgtgaagcaaatgaacaattaaaaattgagaaacaacgtgaatcaagaccaaaaat 482
Query: 483 tcaacaacatttacaagatcttaaacaggatttagcaacagtctct 528
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tcaacaacatttacaagatcttaaacaggatttagcaacagtctct 528
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 636,493,945
Number of extensions: 42214340
Number of successful extensions: 4791562
Number of sequences better than 10.0: 804
Length of query: 538
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 515
Effective length of database: 93,106,754,628
Effective search space: 47949978633420
Effective search space used: 47949978633420
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home