Dictyostelium discoideum cDNA Clone VHM312

Sequence VHM312

ATAATAATAC AAAGAAGAAA TGAAAAATAT AAATAATAAA ATTTTAAAGA
TTTTTATTCT TTTTTTAGCA ATATGCAGTG TTAAATCAGA TACATGTCCA
ACAGATTCAA ATTGGAGACC AACACCAGCA AGTTCCAATT CACCAGTATC
TCCAGCTTTG CCAACCACTT CTTTAGCCTC TGATATTGTA TATGGCGGTA
ATGATTTATA TTACATGGCC TATTGGAGCA TGACCGACCC AAATAACCTT
CAACCAGTTA GTGATGTTGA AAGTGAATTC TCTATTGCAC TTCCAGCATG
GGCACCAGAT TACTTTTTAA TTGTTGCAAA ACAATCAGCT CCAGCCCTTA
AAGCCAATAC TAATTATCAA TTTTCATTTG ATTTCAAATT AGGCCAAGTT
TTGACTCAAG GTATTACCTA TTCAAATATG ACTCTTTCAT TCTACAAACC
AGGTGATATT GATTATCTTT TATGGAGTTA TAGAGCACCA ATGTATTCTT
TTACTTTTAC CGGTGATTTT TCATCAACTA CATATAAAAG TAAAACCATT
ACTTTCAGTG TTCCAGTTGA TCTTGGTCTT TCAACTTTAA TTCTTCAAGT
CAATCGTTC- ---------A TAAGATCGTT CCAGATTCAG GATCATCTAG
ATTCTTTAAT TTCATCGATT GGNATGGTTC ATTAGTTGGT ACACATGTTC
CAACTATCGT TGGTTCACAT GAAAAATGGT GGTCNTACGA CGATAGTAAA
TGCACATACA ACAATGACTG GACCATTTGG GTATGTCAAA AAGGTAGCAA
ATCCGTTGGT AATATCGAAT TTTGGGTACC AAATTTAATT ATTCGTGGTG
AACAAAACGA AGGTGATTCA TTCGTTGGTA GTGTTAGTTT ATTCGGTGAT
GGTATCACTG ATGTTAGAAA GACAGCAATC ACCCGTAATG CCGGTATCAC
TGGTATCACT AGCACAGGCT GGATGTTATG GTTAGATGGT GGTTCACCAA
CCTATTTACA AGTTTGGGCT GCCCAAGTCG CCTATCAACA ATATATCTTT
TTGGCAATTC CATATCCACC AGGTACAACA TTCACCATTT CAACTGAAAA
TAAATGGGCT TGGCAAAATG CTTATGGTTT CAATTGTACT CTTGCTTCAT
CTGCTGCTGA AGTTAGAAGT AGTAATGGAA CCAAATACTA TTTCGATCAA
ACTCATTTAT TCGTTAAAAT TGTTAACCCA GTTTTAACAG GTTCTCCAGC
TGAATCTTTC AATAGAGGTG GTGCTAAAAT TGATGACGTT TATTGGGAAT
ACATTTACCA TATCAATGCT ACAAATCCAA ATGTTTCTCC AAATCAAGA

Translated Amino Acid Sequence VHM312

**YKEEMKNINNKILKIFILFLAICSVKSDTCPTDSNWRPTPASSNSPVSPALPTTSLAS
DIVYGGNDLYYMAYWSMTDPNNLQPVSDVESEFSIALPAWAPDYFLIVAKQSAPALKANT
NYQFSFDFKLGQVLTQGITYSNMTLSFYKPGDIDYLLWSYRAPMYSFTFTGDFSSTTYKS
KTITFSVPVDLGLSTLILQVNR---

---KIVPDSGSSRFFNFIDWXGSLVGTHVPTIVGSHEKWWSYDDSKCTYNNDWTIWVCQK
GSKSVGNIEFWVPNLIIRGEQNEGDSFVGSVSLFGDGITDVRKTAITRNAGITGITSTGW
MLWLDGGSPTYLQVWAAQVAYQQYIFLAIPYPPGTTFTISTENKWAWQNAYGFNCTLASS
AAEVRSSNGTKYYFDQTHLFVKIVNPVLTGSPAESFNRGGAKIDDVYWEYIYHINATNPN
VSPNQ

Homology VHM312 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHM312 (VHM312Q) /CSM/VH/VHM3-A/VHM312Q.Seq.d/                       2472   0.0
VHJ857 (VHJ857Q) /CSM/VH/VHJ8-C/VHJ857Q.Seq.d/                       1431   0.0
VHN290 (VHN290Q) /CSM/VH/VHN2-D/VHN290Q.Seq.d/                       1427   0.0
VHO882 (VHO882Q) /CSM/VH/VHO8-D/VHO882Q.Seq.d/                       1415   0.0
VHH761 (VHH761Q) /CSM/VH/VHH7-C/VHH761Q.Seq.d/                       1370   0.0
VSG382 (VSG382Q) /CSM/VS/VSG3-D/VSG382Q.Seq.d/                       1320   0.0
VHE678 (VHE678Q) /CSM/VH/VHE6-D/VHE678Q.Seq.d/                       1287   0.0
VSD475 (VSD475Q) /CSM/VS/VSD4-D/VSD475Q.Seq.d/                       1239   0.0
VSD791 (VSD791Q) /CSM/VS/VSD7-D/VSD791Q.Seq.d/                       1217   0.0
VHJ113 (VHJ113Q) /CSM/VH/VHJ1-A/VHJ113Q.Seq.d/                       1201   0.0

Homology VHM312 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ444060) Dictyostelium discoideum cDNA clone:ddv55h03, 3' ...  1435   0.0    1
(BJ442632) Dictyostelium discoideum cDNA clone:ddv50b16, 3' ...  1431   0.0    1
(BJ444895) Dictyostelium discoideum cDNA clone:ddv57c24, 3' ...  1427   0.0    1
(BJ445831) Dictyostelium discoideum cDNA clone:ddv60d22, 3' ...  1415   0.0    1
(BJ441410) Dictyostelium discoideum cDNA clone:ddv46j15, 3' ...  1370   0.0    1
(BJ439568) Dictyostelium discoideum cDNA clone:ddv40k20, 3' ...  1287   0.0    1
(AU264096) Dictyostelium discoideum vegetative cDNA clone:VS...  1239   0.0    1
(AU264570) Dictyostelium discoideum vegetative cDNA clone:VS...  1217   0.0    1
(BJ442189) Dictyostelium discoideum cDNA clone:ddv49i03, 3' ...  1201   0.0    1
(BJ443407) Dictyostelium discoideum cDNA clone:ddv52g20, 3' ...  1148   0.0    1

Homology VHM312 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54YG8) RecName: Full=Protein rliB; AltName: Full=Repressed aft...   486   e-135
(Q54LY1) RecName: Full=G8 domain-containing protein DDB_G0286311...   267   1e-69
(Q54L52) RecName: Full=G8 domain-containing protein DDB_G0286897...   255   5e-66
AC116984_193(AC116984|pid:none) Dictyostelium discoideum chromos...   249   3e-64
(Q54XG9) RecName: Full=G8 domain-containing protein DDB_G0278975...   216   2e-54
CP001576_63(CP001576|pid:none) Micromonas sp. RCC299 chromosome ...    47   0.003
CP003108_1386(CP003108|pid:none) Desulfosporosinus orientis DSM ...    36   5.9
CP001656_5757(CP001656|pid:none) Paenibacillus sp. JDR-2, comple...    36   5.9
CP001013_3085(CP001013|pid:none) Leptothrix cholodnii SP-6, comp...    35   7.6
CP001977_825(CP001977|pid:none) Propionibacterium acnes SK137, c...    35   10.0

Homology VHM312 vs Genome