Dictyostelium discoideum cDNA Clone VHM256

Sequence VHM256

TATATAAATA AAGGAAAGAA ATGTCAGATA CACAATCCAA TGTTCCTCAA
TCACAAATTC AACCACAAGT ACCAACAATT GGTGTAGTTA GAGCAGTAAA
TAGTGGTGAT TCATTGGTAA TTCAAGATTT AAAAACAGCC GATTCCCCAA
AAGTTGAATA TTCATTATCT CATCTTACTG TACCACGTTT AGGTTATCAT
GGTTCAAATG ATAAACCACC AACAAAAGAT TTGCCATTTG CATGGGAAAG
TCGTGAATTT TTAAGATCAA AATGTATTGG TAAAAAAGTT CAATTCTTTA
CAGATTATAC TGCACCAACT GGTAAGAAAT TCATTTCAGT TTATCTTTAT
GATGATTTAG AAAATAGTTT AAATAAACAA ATGATTGAAG AGGGTTGGGC
TTCATTATAT AGATCAACAA CTGGTAAAGA AAATAAAAAA CCTGAATATT
TAAATTTAAT TCAATTAGAA AGTGAAGCAA TTTCAAAAGA ATTAGGTATT
CATAATAAGA ATCCAATTGC AATTACAAAT TCAATTCGTC CAATTCATAC
TATTAATTCA TTTGATTTAT TTAATAAATT AAAGGGTAAA CAATTGACAG
CAGTTGT--- -------TTC AATTCGCTAA TAACAAAACT AAAGATATCG
AATCTCAATT GGCTTCATTG GAAATTAACA ATGAAGATTC AACCATTGTT
GCAATGCCAA AGGTTGGTGA TATCGTTAAA TTCAAATCTC AACATGACAA
GAAATGGCAT CGTTCAAAGA TTACCTCTAT CGCCGATGGT AAAATCAATG
TTAATCTCAT TGATTTGGGT GAAAGAGAAT CTTTCCCACA ATCTCAATCA
AGTACTCTCA TTAGAAATAT CAATCATAAA TTACAAAGCC TTCCTTCATT
GGTAACTTTG GTCAAATTAG CCTCTTGTAA GAATCCTTCC AATGATGATA
TCTACAATGA TGCTATGGAT TTCATGGAAA AAGAGTTTTT AGATCTCAAA
GTTGGCGTTA ATATCATACG TGATATCGAT GGTACTCAAC ATGTTCTCCT
CTCTGATAAT GCTGGTATTA TCAATGGTGA ATTGGTTCGT AATGGTTTGG
TTAGTGTCGA TCGTTCAACT AAATTACCCT CAATTCAACA ACTTCAAGAT
GAAGAACAAA AAGCTAAATC AAAGAGATTA GGTGTTTGGA GATTCGGTGA
TATCGATAGT GATGATGAAG ATGATAAACC ACGTTCAAAT TTCAAAGGTA
AAGGTGGTAA CCAATTTCAA AAAAANAATT ATAATATTTA TAAATTTTCT
TTT

Translated Amino Acid Sequence VHM256

yk*RKEMSDTQSNVPQSQIQPQVPTIGVVRAVNSGDSLVIQDLKTADSPKVEYSLSHLTV
PRLGYHGSNDKPPTKDLPFAWESREFLRSKCIGKKVQFFTDYTAPTGKKFISVYLYDDLE
NSLNKQMIEEGWASLYRSTTGKENKKPEYLNLIQLESEAISKELGIHNKNPIAITNSIRP
IHTINSFDLFNKLKGKQLTAV---

---QFANNKTKDIESQLASLEINNEDSTIVAMPKVGDIVKFKSQHDKKWHRSKITSIADG
KINVNLIDLGERESFPQSQSSTLIRNINHKLQSLPSLVTLVKLASCKNPSNDDIYNDAMD
FMEKEFLDLKVGVNIIRDIDGTQHVLLSDNAGIINGELVRNGLVSVDRSTKLPSIQQLQD
EEQKAKSKRLGVWRFGDIDSDDEDDKPRSNFKGKGGNQFQKXNYNIYKFSF

Homology VHM256 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHM256 (VHM256Q) /CSM/VH/VHM2-C/VHM256Q.Seq.d/                       2476   0.0
VFJ589 (VFJ589Q) /CSM/VF/VFJ5-D/VFJ589Q.Seq.d/                       1289   0.0
VHP896 (VHP896Q) /CSM/VH/VHP8-D/VHP896Q.Seq.d/                       1285   0.0
VHB524 (VHB524Q) /CSM/VH/VHB5-A/VHB524Q.Seq.d/                       1285   0.0
AHB794 (AHB794Q) /CSM/AH/AHB7-D/AHB794Q.Seq.d/                       1285   0.0
AFI228 (AFI228Q) /CSM/AF/AFI2-B/AFI228Q.Seq.d/                       1271   0.0
CHM330 (CHM330Q) /CSM/CH/CHM3-B/CHM330Q.Seq.d/                       1255   0.0
AHE378 (AHE378Q) /CSM/AH/AHE3-D/AHE378Q.Seq.d/                       1231   0.0
AHI667 (AHI667Q) /CSM/AH/AHI6-C/AHI667Q.Seq.d/                       1229   0.0
CHE669 (CHE669Q) /CSM/CH/CHE6-C/CHE669Q.Seq.d/                       1219   0.0

Homology VHM256 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ444230) Dictyostelium discoideum cDNA clone:ddv55o14, 3' ...  1291   0.0    2
(BJ433084) Dictyostelium discoideum cDNA clone:ddv20a23, 3' ...  1289   0.0    1
(BJ446518) Dictyostelium discoideum cDNA clone:ddv62p24, 3' ...  1275   0.0    2
(BJ437419) Dictyostelium discoideum cDNA clone:ddv34o05, 3' ...  1275   0.0    2
(BJ348957) Dictyostelium discoideum cDNA clone:dda34l23, 3' ...  1275   0.0    2
(BJ382953) Dictyostelium discoideum cDNA clone:ddc46l07, 3' ...  1223   0.0    3
(BJ378340) Dictyostelium discoideum cDNA clone:ddc31i18, 3' ...  1209   0.0    2
(BJ352977) Dictyostelium discoideum cDNA clone:dda48e18, 3' ...  1207   0.0    2
(BJ348797) Dictyostelium discoideum cDNA clone:dda34l11, 3' ...  1207   0.0    2
(BJ425434) Dictyostelium discoideum cDNA clone:ddv55o14, 5' ...  1203   0.0    1

Homology VHM256 vs Protein

Sequences producing significant alignments:                      (bits) Value


BT071103_1(BT071103|pid:none) Picea sitchensis clone WS02771_D01...   101   1e-19
AM398207_1(AM398207|pid:none) Picea abies mRNA for TUDOR protein...   101   1e-19
AY320036_1(AY320036|pid:none) Oryza sativa (japonica cultivar-gr...    99   7e-19
AB010069_10(AB010069|pid:none) Arabidopsis thaliana genomic DNA,...    92   5e-17
AB078603_1(AB078603|pid:none) Pisum sativum SN4TDR mRNA for 110 ...    86   6e-15
AL163912_6(AL163912|pid:none) Arabidopsis thaliana DNA chromosom...    84   1e-14
CP002688_859(CP002688|pid:none) Arabidopsis thaliana chromosome ...    84   1e-14
AL606610_11(AL606610|pid:none) Oryza sativa genomic DNA, chromos...    82   5e-14
CP000287_419(CP000287|pid:none) Cryptococcus gattii WM276 chromo...    81   1e-13
AE014296_74(AE014296|pid:none) Drosophila melanogaster chromosom...    80   3e-13

Homology VHM256 vs Genome