Homology VHL201 vs DNA
Query= VHL201 (VHL201Q) /CSM/VH/VHL2-A/VHL201Q.Seq.d/
(1363 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AF482381) Dictyostelium discoideum ABC transporter AbcG2 (a... 1273 0.0 1
(AF246689) Dictyostelium discoideum ABC transporter mdrA1 (M... 1273 0.0 1
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 1273 0.0 1
(BJ424603) Dictyostelium discoideum cDNA clone:ddv53a02, 5' ... 1273 0.0 1
(BJ331076) Dictyostelium discoideum cDNA clone:dda33f23, 5' ... 1261 0.0 1
(BJ443459) Dictyostelium discoideum cDNA clone:ddv53a02, 3' ... 1249 0.0 1
(BJ442976) Dictyostelium discoideum cDNA clone:ddv51c18, 3' ... 1241 0.0 1
(BJ352854) Dictyostelium discoideum cDNA clone:dda48l03, 3' ... 1241 0.0 1
(BJ351047) Dictyostelium discoideum cDNA clone:dda41j19, 3' ... 1241 0.0 1
(BJ350392) Dictyostelium discoideum cDNA clone:dda39o15, 3' ... 1241 0.0 1
(BJ442901) Dictyostelium discoideum cDNA clone:ddv51e11, 3' ... 1233 0.0 1
(BJ357628) Dictyostelium discoideum cDNA clone:dda64n03, 3' ... 1191 0.0 1
(BJ341959) Dictyostelium discoideum cDNA clone:dda8m24, 3' e... 1191 0.0 1
(BJ350397) Dictyostelium discoideum cDNA clone:dda39p16, 3' ... 1189 0.0 1
(BJ348882) Dictyostelium discoideum cDNA clone:dda34m16, 3' ... 1189 0.0 1
(BJ352956) Dictyostelium discoideum cDNA clone:dda48b14, 3' ... 1183 0.0 1
(BJ332859) Dictyostelium discoideum cDNA clone:dda40i04, 5' ... 1183 0.0 1
(BJ442807) Dictyostelium discoideum cDNA clone:ddv51d02, 3' ... 1179 0.0 1
(BJ444530) Dictyostelium discoideum cDNA clone:ddv56m16, 3' ... 1178 0.0 1
(BJ396567) Dictyostelium discoideum cDNA clone:dds43j06, 5' ... 1160 0.0 1
(BJ337302) Dictyostelium discoideum cDNA clone:dda56o23, 5' ... 1156 0.0 1
(BJ353881) Dictyostelium discoideum cDNA clone:dda51b22, 3' ... 1126 0.0 1
(BJ366691) Dictyostelium discoideum cDNA clone:ddc39l22, 5' ... 1112 0.0 1
(BJ357683) Dictyostelium discoideum cDNA clone:dda64j08, 3' ... 1106 0.0 1
(BJ347778) Dictyostelium discoideum cDNA clone:dda31l01, 3' ... 1106 0.0 1
(BJ357898) Dictyostelium discoideum cDNA clone:dda65g03, 3' ... 1098 0.0 1
(BJ446722) Dictyostelium discoideum cDNA clone:ddv63k14, 3' ... 1082 0.0 1
(BJ400689) Dictyostelium discoideum cDNA clone:dds14g11, 3' ... 1061 0.0 1
(BJ337110) Dictyostelium discoideum cDNA clone:dda56e07, 5' ... 1045 0.0 1
(BJ347791) Dictyostelium discoideum cDNA clone:dda31n06, 3' ... 1019 0.0 1
(BJ347779) Dictyostelium discoideum cDNA clone:dda31l02, 3' ... 1019 0.0 1
(BJ420852) Dictyostelium discoideum cDNA clone:ddv40l15, 5' ... 1007 0.0 1
(BJ332604) Dictyostelium discoideum cDNA clone:dda39o15, 5' ... 1001 0.0 1
(BJ341387) Dictyostelium discoideum cDNA clone:dda6n09, 3' e... 975 0.0 2
(BJ424144) Dictyostelium discoideum cDNA clone:ddv51c18, 5' ... 957 0.0 1
(BJ338653) Dictyostelium discoideum cDNA clone:dda62o08, 5' ... 936 0.0 1
(BJ398256) Dictyostelium discoideum cDNA clone:dds11n14, 3' ... 922 0.0 1
(BJ409164) Dictyostelium discoideum cDNA clone:dds39k17, 3' ... 916 0.0 1
(BJ330325) Dictyostelium discoideum cDNA clone:dda31l01, 5' ... 858 0.0 1
(AU034314) Dictyostelium discoideum slug cDNA, clone SLC570. 854 0.0 1
(BJ339113) Dictyostelium discoideum cDNA clone:dda64n03, 5' ... 854 0.0 1
(BJ337165) Dictyostelium discoideum cDNA clone:dda56b13, 5' ... 846 0.0 1
(BJ335790) Dictyostelium discoideum cDNA clone:dda51f17, 5' ... 846 0.0 1
(BJ425730) Dictyostelium discoideum cDNA clone:ddv56m16, 5' ... 835 0.0 1
(BJ339160) Dictyostelium discoideum cDNA clone:dda64j08, 5' ... 801 0.0 1
(AU269007) Dictyostelium discoideum vegetative cDNA clone:VS... 783 0.0 2
(AU269006) Dictyostelium discoideum vegetative cDNA clone:VS... 783 0.0 2
(BJ334936) Dictyostelium discoideum cDNA clone:dda48g11, 5' ... 771 0.0 1
(BJ336578) Dictyostelium discoideum cDNA clone:dda54l07, 5' ... 761 0.0 1
(BJ366300) Dictyostelium discoideum cDNA clone:ddc38b18, 5' ... 759 0.0 1
(BJ354676) Dictyostelium discoideum cDNA clone:dda54l07, 3' ... 747 0.0 2
(BJ424073) Dictyostelium discoideum cDNA clone:ddv51e11, 5' ... 728 0.0 1
(C93189) Dictyostelium discoideum slug cDNA, clone SSM755. 714 0.0 2
(BJ338497) Dictyostelium discoideum cDNA clone:dda61b24, 5' ... 690 0.0 1
(BJ331281) Dictyostelium discoideum cDNA clone:dda34m16, 5' ... 688 0.0 1
(BJ365081) Dictyostelium discoideum cDNA clone:ddc34g05, 5' ... 650 0.0 1
(BJ400130) Dictyostelium discoideum cDNA clone:dds8m19, 3' e... 642 e-180 1
(BJ348028) Dictyostelium discoideum cDNA clone:dda31o23, 3' ... 603 e-168 1
(BJ353589) Dictyostelium discoideum cDNA clone:dda50c23, 3' ... 575 e-159 1
(BJ348972) Dictyostelium discoideum cDNA clone:dda34o24, 3' ... 559 e-154 1
(BJ335665) Dictyostelium discoideum cDNA clone:dda51j06, 5' ... 543 e-150 1
(BJ393775) Dictyostelium discoideum cDNA clone:dds32g14, 5' ... 535 e-147 1
(BJ336051) Dictyostelium discoideum cDNA clone:dda52f18, 5' ... 535 e-147 1
(AU061001) Dictyostelium discoideum slug cDNA, clone SLC570. 502 e-138 2
(BJ339428) Dictyostelium discoideum cDNA clone:dda65f11, 5' ... 490 e-134 1
(BJ338508) Dictyostelium discoideum cDNA clone:dda61e22, 5' ... 488 e-133 1
(BJ397331) Dictyostelium discoideum cDNA clone:dds45m20, 5' ... 371 5e-98 1
(BJ427797) Dictyostelium discoideum cDNA clone:ddv63k14, 5' ... 359 2e-94 1
(BJ390939) Dictyostelium discoideum cDNA clone:dds14g11, 5' ... 327 8e-86 2
(BJ333235) Dictyostelium discoideum cDNA clone:dda41o20, 5' ... 272 3e-68 1
(BJ407619) Dictyostelium discoideum cDNA clone:dds43j06, 3' ... 260 1e-64 1
(AU284436) Dictyostelium discoideum gamete cDNA clone:FC-AV1... 208 7e-53 2
(BJ409518) Dictyostelium discoideum cDNA clone:dds42k10, 3' ... 155 5e-33 1
(BJ328413) Dictyostelium discoideum cDNA clone:dda28g05, 5' ... 72 4e-10 2
(AU272357) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 44 8e-07 3
(AU272356) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 44 8e-07 3
(AU061469) Dictyostelium discoideum slug cDNA, clone SLE364. 44 0.003 2
(AF482384) Dictyostelium discoideum ABC transporter AbcG5 (a... 38 0.007 5
(AF482385) Dictyostelium discoideum ABC transporter AbcG6 (a... 38 0.17 5
(AC192722) Pan troglodytes BAC clone CH251-627B17 from chrom... 48 0.88 1
(AC146269) Pan troglodytes BAC clone RP43-29B18 from chromos... 48 0.88 1
(AC005100) Homo sapiens BAC clone CTA-351O6 from 7, complete... 48 0.88 1
(AC079358) Homo sapiens chromosome 3 clone RP11-399H5, WORKI... 48 0.88 1
(AL451002) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 48 0.88 1
(EI348718) GM_WBc0096A02.r GM_WBc Glycine max genomic clone ... 48 0.88 1
(AG085944) Pan troglodytes DNA, clone: PTB-084C08.R. 48 0.88 1
(AC202191) Zea mays chromosome 4 clone CH201-172H10; ZMMBBc0... 38 1.6 7
(CI573261) Oryza sativa Japonica Group cDNA, clone: J01B3084... 38 2.1 2
(AC166070) Bos taurus clone CH240-174E21, WORKING DRAFT SEQU... 38 2.4 5
(BX125415) Danio rerio genomic clone DKEY-76B23, genomic sur... 42 2.8 2
(AM438221) Vitis vinifera contig VV78X205388.8, whole genome... 46 3.5 1
(AC090821) Homo sapiens chromosome 8, clone CTD-2309H9, comp... 46 3.5 1
(AC008376) Homo sapiens chromosome 5 clone CTC-207P7, comple... 46 3.5 1
(AC160820) Bos taurus clone CH240-24F8, WORKING DRAFT SEQUEN... 46 3.5 1
(AC169356) Bos taurus clone CH240-199D21, WORKING DRAFT SEQU... 46 3.5 1
(AC017097) Homo sapiens chromosome 8 clone RP11-531P22, WORK... 46 3.5 1
(ER613340) 1093016326940 Global-Ocean-Sampling_GS-36-01-01-2... 46 3.5 1
(EJ567347) 1092959731864 Global-Ocean-Sampling_GS-29-01-01-1... 46 3.5 1
(EC373294) G840P34FJ15.T0 Oscarella carmela pSport1 Library ... 46 3.5 1
(DH412144) Oryzias latipes Fosmid clone:GOLWFno818_j14, reve... 36 4.6 3
>(AF482381) Dictyostelium discoideum ABC transporter AbcG2 (abcG2) and
ABC transporter AbcG18 (abcG18) genes, complete cds.
Length = 12500
Score = 1273 bits (642), Expect = 0.0
Identities = 642/642 (100%)
Strand = Plus / Plus
Query: 1 attctttttatcattaatcttttctgaaattccaattgcactcttagagactgtggtatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3169 attctttttatcattaatcttttctgaaattccaattgcactcttagagactgtggtatt 3228
Query: 61 ttgtgttttggtttattggatgtgtggtctacaagcgaatgcagagaaattcatttactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3229 ttgtgttttggtttattggatgtgtggtctacaagcgaatgcagagaaattcatttactt 3288
Query: 121 tttattaatgaatttcgttggtgatttggctttccaatctttctttaaaatggtttcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3289 tttattaatgaatttcgttggtgatttggctttccaatctttctttaaaatggtttcagc 3348
Query: 181 ttttgctccaaatgcaaccttggcttcagttattgcaccagctgcattggctccattcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3349 ttttgctccaaatgcaaccttggcttcagttattgcaccagctgcattggctccattcat 3408
Query: 241 tttgttctctggttttatggcaccaaaaagaagtattggtggttggtggatttggattta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3409 tttgttctctggttttatggcaccaaaaagaagtattggtggttggtggatttggattta 3468
Query: 301 ttggatctcaccaattaaatatgcttttgaaggtctcatgtcaaatgaacatcatggttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3469 ttggatctcaccaattaaatatgcttttgaaggtctcatgtcaaatgaacatcatggttt 3528
Query: 361 aatttatagctgtgatgatagtgaaacaatcccaccacgtaatactccaaactttgaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3529 aatttatagctgtgatgatagtgaaacaatcccaccacgtaatactccaaactttgaatt 3588
Query: 421 accatatccaagaggttctggaaattcttcaatttgtcaaattactagaggtgatcaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3589 accatatccaagaggttctggaaattcttcaatttgtcaaattactagaggtgatcaatt 3648
Query: 481 ccttgatcaattaggtatgccacaaaataattggttcaaatggatcgatttgttaattgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3649 ccttgatcaattaggtatgccacaaaataattggttcaaatggatcgatttgttaattgt 3708
Query: 541 ttttgcatttggtgcacttttctcttttggtatgtacttcttcctcaagaatgttcatgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3709 ttttgcatttggtgcacttttctcttttggtatgtacttcttcctcaagaatgttcatgt 3768
Query: 601 cgatcatagagcatctgatccaaagaatgataaacgttctaa 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3769 cgatcatagagcatctgatccaaagaatgataaacgttctaa 3810
Score = 1241 bits (626), Expect = 0.0
Identities = 629/630 (99%)
Strand = Plus / Plus
Query: 653 ttatgtttggtggtatgtctggtatgtcttcaattccaatcgttaatatggaacgtggtg 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5049 ttatgtttggtggtatgtctggtatgtcttcaattccaatcgttaatatggaacgtggtg 5108
Query: 713 ttttctatcgtgagcaagcatctggcatgtattcaattccaatttatctcttcactttta 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5109 ttttctatcgtgagcaagcatctggcatgtattcaattccaatttatctcttcactttta 5168
Query: 773 tcgttaccgatttaccatgggttttcctctctgctattatttatacagttccaatgtact 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5169 tcgttaccgatttaccatgggttttcctctctgctattatttatacagttccaatgtact 5228
Query: 833 ttatctctggtcttagattagatccaaatggtgctccattcttttaccactccttcatct 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5229 ttatctctggtcttagattagatccaaatggtgctccattcttttaccactccttcatct 5288
Query: 893 cattcacaacttatttcaatttctcaatgttggcaatggttttcgcaactgtacttccaa 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5289 cattcacaacttatttcaatttctcaatgttggcaatggttttcgcaactgtacttccaa 5348
Query: 953 ccgatgaaattgctcatgccttgggtggtgtagcactttcaatcagttctttgttcgctg 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5349 ccgatgaaattgctcatgccttgggtggtgtagcactttcaatcagttctttgttcgctg 5408
Query: 1013 gttttatgatcccaccagcttcaatcgctaaaggatggcattggttctaccaattggatc 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5409 gttttatgatcccaccagcttcaatcgctaaaggatggcattggttctaccaattggatc 5468
Query: 1073 caactacttatccattggcaatcgttatgattaatgaattccaagatttagaattccatt 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5469 caactacttatccattggcaatcgttatgattaatgaattccaagatttagaattccatt 5528
Query: 1133 gtacaagtagtgaatcagtcactatacctaatgttcttacagttaatggtacttatattg 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5529 gtacaagtagtgaatcagtcactatacctaatgttcttacagttaatggtacttatattg 5588
Query: 1193 atgttggcccaatttgtccaattacaaatggtaatcaaattttacaacgttaggaaatga 1252
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5589 atgttggcccaatttgtccaattacaaatggtaatcaaattttacaacgttatgaaatga 5648
Query: 1253 aacctgaagataaatataaattcttggctg 1282
||||||||||||||||||||||||||||||
Sbjct: 5649 aacctgaagataaatataaattcttggctg 5678
Score = 52.0 bits (26), Expect(6) = 2e-14
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 281 ggttggtggatttggatttattggatctcaccaattaaatatgcttttgaaggt 334
||||||||||||||| | |||||||| ||||||||| | |||| ||| ||||||
Sbjct: 8892 ggttggtggatttggctctattggatttcaccaattcattatggtttcgaaggt 8945
Score = 44.1 bits (22), Expect(6) = 2e-14
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 703 gaacgtggtgttttctatcgtgagcaagcatctggcatgtat 744
||||||||||| ||||||||||| ||||| || || ||||||
Sbjct: 10827 gaacgtggtgtattctatcgtgaacaagcttcggggatgtat 10868
Score = 40.1 bits (20), Expect(6) = 2e-14
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1006 ttcgctggttttatgatccc 1025
||||||||||||||||||||
Sbjct: 11130 ttcgctggttttatgatccc 11149
Score = 30.2 bits (15), Expect(6) = 2e-14
Identities = 18/19 (94%)
Strand = Plus / Plus
Query: 241 tttgttctctggttttatg 259
||||||| |||||||||||
Sbjct: 5398 tttgttcgctggttttatg 5416
Score = 30.2 bits (15), Expect(6) = 2e-14
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 655 atgtttggtggtatg 669
|||||||||||||||
Sbjct: 10779 atgtttggtggtatg 10793
Score = 26.3 bits (13), Expect(6) = 2e-14
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 26 gaaattccaattg 38
|||||||||||||
Sbjct: 3890 gaaattccaattg 3902
Score = 40.1 bits (20), Expect(3) = 0.56
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1205 tttgtccaattacaaatggtaatcaaatttta 1236
|||||||||||||||| ||| | |||||||||
Sbjct: 9064 tttgtccaattacaaaaggtgaacaaatttta 9095
Score = 32.2 bits (16), Expect(3) = 0.56
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 346 tgaacatcatggtttaattt 365
|||| |||||||||||||||
Sbjct: 4636 tgaaaatcatggtttaattt 4655
Score = 30.2 bits (15), Expect(3) = 0.56
Identities = 21/23 (91%)
Strand = Plus / Plus
Query: 670 tctggtatgtcttcaattccaat 692
||||| |||| ||||||||||||
Sbjct: 5129 tctggcatgtattcaattccaat 5151
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,491,578,555
Number of extensions: 87627629
Number of successful extensions: 6578311
Number of sequences better than 10.0: 104
Length of query: 1363
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1339
Effective length of database: 97,308,875,965
Effective search space: 130296584917135
Effective search space used: 130296584917135
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home