Homology VHK752 vs Protein
Query= VHK752 (VHK752Q) /CSM/VH/VHK7-C/VHK752Q.Seq.d/
(1336 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX571973_4(BX571973|pid:none) Zebrafish DNA sequence from clone ... 230 2e-58
FP929123_87(FP929123|pid:none) Leptosphaeria maculans JN3 lm_Sup... 228 5e-58
FQ311438_86(FQ311438|pid:none) Sporisorium reilianum SRZ2 chromo... 228 8e-58
(Q5F418) RecName: Full=26S proteasome non-ATPase regulatory subu... 225 4e-57
(Q3TXS7) RecName: Full=26S proteasome non-ATPase regulatory subu... 224 9e-57
D44466_1(D44466|pid:none) Homo sapiens mRNA for proteasome subun... 224 9e-57
BC047897_1(BC047897|pid:none) Homo sapiens proteasome (prosome, ... 224 9e-57
(Q86VU1) RecName: Full=26S proteasome non-ATPase regulatory subu... 224 9e-57
BC001053_1(BC001053|pid:none) Homo sapiens proteasome (prosome, ... 224 9e-57
BC151445_1(BC151445|pid:none) Bos taurus proteasome (prosome, ma... 224 9e-57
BC014013_1(BC014013|pid:none) Homo sapiens proteasome (prosome, ... 224 9e-57
BC105883_1(BC105883|pid:none) Rattus norvegicus proteasome (pros... 224 1e-56
BC100172_1(BC100172|pid:none) Xenopus laevis hypothetical protei... 223 1e-56
AK087947_1(AK087947|pid:none) Mus musculus 2 days neonate thymus... 223 2e-56
AM270075_3(AM270075|pid:none) Aspergillus niger contig An04c0140... 223 3e-56
FQ857224_32(FQ857224|pid:none) Piriformospora indica PIRI_contig... 219 2e-55
AF443184_1(AF443184|pid:none) Paracoccidioides brasiliensis subu... 218 5e-55
(Q9V3P6) RecName: Full=26S proteasome non-ATPase regulatory subu... 216 2e-54
BT001598_1(BT001598|pid:none) Drosophila melanogaster RE29621 fu... 216 2e-54
BC039845_1(BC039845|pid:none) Homo sapiens, Similar to proteasom... 214 7e-54
BC022955_1(BC022955|pid:none) Mus musculus proteasome (prosome, ... 214 7e-54
BC018172_1(BC018172|pid:none) Mus musculus proteasome (prosome, ... 214 7e-54
AK361326_1(AK361326|pid:none) Hordeum vulgare subsp. vulgare mRN... 214 7e-54
CR762098_1(CR762098|pid:none) Xenopus tropicalis finished cDNA, ... 214 1e-53
AE017353_177(AE017353|pid:none) Cryptococcus neoformans var. neo... 212 3e-53
(O74762) RecName: Full=26S proteasome regulatory subunit rpn2; ... 211 1e-52
CP003006_339(CP003006|pid:none) Myceliophthora thermophila ATCC ... 209 3e-52
EZ422992_1(EZ422992|pid:none) TSA: Glossina morsitans morsitans ... 209 4e-52
CU633876_161(CU633876|pid:none) Podospora anserina S mat+ genomi... 208 5e-52
BC045463_1(BC045463|pid:none) Danio rerio proteasome (prosome, m... 208 5e-52
AL606691_12(AL606691|pid:none) Oryza sativa genomic DNA, chromos... 208 6e-52
CR855173_3(CR855173|pid:none) Oryza sativa genomic DNA, chromoso... 208 6e-52
AM453244_1(AM453244|pid:none) Vitis vinifera contig VV78X103020.... 205 4e-51
AM458338_1(AM458338|pid:none) Vitis vinifera contig VV78X165900.... 204 7e-51
AY230830_1(AY230830|pid:none) Arabidopsis thaliana 26S proteasom... 203 2e-50
AC003974_14(AC003974|pid:none) Arabidopsis thaliana chromosome 2... 203 2e-50
AY242527_1(AY242527|pid:none) Arabidopsis thaliana 26S proteasom... 203 2e-50
AB372269_1(AB372269|pid:none) Capsicum chinense mRNA for putativ... 202 5e-50
FN392320_701(FN392320|pid:none) Pichia pastoris GS115 chromosome... 196 2e-48
CP001328_423(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 190 2e-46
CP002504_20(CP002504|pid:none) Eremothecium cymbalariae DBVPG#72... 189 2e-46
BC064398_1(BC064398|pid:none) Homo sapiens proteasome (prosome, ... 187 9e-46
FM992688_1111(FM992688|pid:none) Candida dubliniensis CD36 chrom... 185 6e-45
HQ206478_1(HQ206478|pid:none) Perca flavescens clone Pf_226 26S ... 181 7e-44
CP000592_89(CP000592|pid:none) Ostreococcus lucimarinus CCE9901 ... 178 7e-43
(Q6FIP2) RecName: Full=26S proteasome regulatory subunit RPN2; ... 175 5e-42
HE575324_873(HE575324|pid:none) Trypanosoma congolense IL3000 an... 174 1e-41
CU928175_366(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 173 2e-41
HE573027_975(HE573027|pid:none) Trypanosoma vivax Y486 annotated... 173 2e-41
CT005266_179(CT005266|pid:none) Leishmania major strain Friedlin... 172 5e-41
DQ213424_1(DQ213424|pid:none) Taeniopygia guttata clone 0065P002... 172 5e-41
AM502246_179(AM502246|pid:none) Leishmania infantum chromosome 2... 171 7e-41
JP286084_1(JP286084|pid:none) TSA: Pipa carvalhoi Pipa_carvalhoi... 171 9e-41
FN393074_95(FN393074|pid:none) Saccharomyces cerevisiae EC1118 c... 170 2e-40
HE580267_298(HE580267|pid:none) Naumovozyma dairenensis CBS 421 ... 168 7e-40
HE576756_336(HE576756|pid:none) Naumovozyma castellii CBS 4309 c... 167 1e-39
AF186594_4(AF186594|pid:none) Drosophila melanogaster phosphogly... 167 2e-39
EF464672_1(EF464672|pid:none) Gossypium hirsutum 26S proteasome ... 163 2e-38
(Q18115) RecName: Full=26S proteasome non-ATPase regulatory subu... 159 3e-37
CR954212_78(CR954212|pid:none) Ostreococcus tauri strain OTTH059... 150 1e-34
FN357888_3(FN357888|pid:none) Schistosoma mansoni genome sequenc... 149 3e-34
FR823389_102(FR823389|pid:none) Neospora caninum Liverpool compl... 144 2e-32
AE014187_640(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 143 2e-32
AB070257_1(AB070257|pid:none) Oryza sativa Japonica Group OsRPN2... 140 2e-31
CR940353_385(CR940353|pid:none) Theileria annulata strain Ankara... 139 3e-31
AY267183_1(AY267183|pid:none) Puccinia triticina putative protea... 137 2e-30
AK220772_1(AK220772|pid:none) Arabidopsis thaliana mRNA for 26S ... 112 6e-23
CP000883_66(CP000883|pid:none) Hemiselmis andersenii chromosome ... 80 3e-13
CP002174_45(CP002174|pid:none) Cryptomonas paramecium strain CCA... 59 5e-07
T15575(T15575)hypothetical protein C23G10.4a - Caenorhabditis el... 52 6e-05
FQ790340_145(FQ790340|pid:none) Botryotinia fuckeliana isolate T... 42 0.062
AL844507_149(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.68
AM398681_1482(AM398681|pid:none) Flavobacterium psychrophilum JI... 38 1.2
CP002874_1979(CP002874|pid:none) Brachyspira intermedia PWS/A, c... 38 1.5
HE605206_1040(HE605206|pid:none) Candida parapsilosis strain CDC... 38 1.5
CP001720_1436(CP001720|pid:none) Desulfotomaculum acetoxidans DS... 38 1.5
HE612859_322(HE612859|pid:none) Tetrapisispora phaffii CBS 4417 ... 37 2.0
A90110(A90110) 26S proteasome regulatory subunit [imported] - Gu... 36 5.8
BA000023_2434(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 36 5.8
CP000716_1631(CP000716|pid:none) Thermosipho melanesiensis BI429... 35 7.5
CP000496_548(CP000496|pid:none) Scheffersomyces stipitis CBS 605... 35 7.5
(Q041W0) RecName: Full=UPF0348 protein LGAS_1400; &CP000413_134... 35 9.9
EU716174_1(EU716174|pid:none) Bos taurus melatonin receptor 1A g... 35 9.9
(B9W7S3) RecName: Full=Amino-acid acetyltransferase, mitochondri... 35 9.9
(O02769) RecName: Full=Melatonin receptor type 1A; Shor... 35 9.9
>BX571973_4(BX571973|pid:none) Zebrafish DNA sequence from clone
DKEY-254A11 in linkage group 22 Contains the gene for a
novel protein (zgc:77285 ), the gene for a novel protein
(zgc:55818), the gene for a novel protein similar to
vertebrate centaurin beta 2 (CENTB2) and six CpG islands,
complete sequence.
Length = 958
Score = 230 bits (586), Expect = 2e-58
Identities = 105/200 (52%), Positives = 147/200 (73%)
Frame = +3
Query: 666 AESYNPHVRYGAAFALGIACAGTGQRDALEILKSLTTDSVGYVKQAAWISMAMVLIQTSK 845
+ESYNPHVRYGAA ALGI CAGTG ++A+ +L+ +T D V YV+Q A I+ A+++IQ ++
Sbjct: 636 SESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTE 695
Query: 846 ELVPEAETARKLFATCISDKREDSMSKFGAVLAFGVIDAGGRNSTIQLHSPSGHKNMNAI 1025
P+ R+L++ I+DK +D M+KFGA+LA GV+DAGGRN TI L S +GH +M ++
Sbjct: 696 VTCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGVLDAGGRNVTISLQSRTGHTHMPSV 755
Query: 1026 VGIAGFLQFWYWFPMTHFMGLALTPTSIIGLNKNLEMPVFTFKSNCRPSLFAYPPETKPX 1205
VG+ F QFW+WFP++HF+ LA TPT+IIGLNK+L+MP ++SNC+PS FAYPP +
Sbjct: 756 VGLLVFTQFWFWFPLSHFLSLAFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPPLEVP 815
Query: 1206 XXXXXNKIETAILSYSRKNK 1265
K+ TA+LS + K K
Sbjct: 816 KEKEKEKVSTAVLSITAKAK 835
Score = 175 bits (444), Expect = 5e-42
Identities = 96/202 (47%), Positives = 130/202 (64%), Gaps = 8/202 (3%)
Frame = +2
Query: 71 LSLLDEDQLELKSYSLEKLDSCVDEFWSEIASSSIDKIKSLSVNKQFPKHELASLVLSKV 250
+SLLDED+ +LK ++L KL+S V++FW+EI S S+ KI+ L ++ F E A+LV SKV
Sbjct: 3 ISLLDEDEPQLKEFALHKLNSVVNDFWAEI-SESVGKIEVLYEDETFRSREFAALVASKV 61
Query: 251 YYNLSDFPNSMEYALSAGSLFNVLSKSEYIETLLYKFIDEYIKLRTST--------NKDT 406
+Y+L F S+ YAL AG LFNV SEY+ET++ K ID Y K R KD
Sbjct: 62 FYHLGAFDESLSYALGAGDLFNVNDDSEYVETIIAKCIDHYTKQRVENAELPEEEEKKD- 120
Query: 407 VINPHLESIVMGMFDRCFKEGSYKQALGIAIEARRLDIIEKAISQSGNVNSMLPYCLHIC 586
I+P LE IV MF RC + YKQA+GIA+E RRLDI EK I +S ++ +L Y L IC
Sbjct: 121 -IDPRLEGIVNKMFQRCLGDHKYKQAIGIALETRRLDIFEKTILESNDIGGLLAYSLKIC 179
Query: 587 NVSVNNRHFRHSVLXILVNLHL 652
+ N+ FR+ VL +LV L++
Sbjct: 180 MSLMQNKKFRNEVLRVLVKLYM 201
Score = 37.0 bits (84), Expect = 2.6
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +3
Query: 678 NPHVRYGAAFALGIACAGTGQRDALEILKSLTTDSVGYVKQAAWISMAMVLI 833
N VR+G A LG+A GT ++D ++LKS +AA +++ +V++
Sbjct: 465 NDIVRHGGALGLGLAALGTARQDVYDLLKSNLYQDDAVTGEAAGLALGLVML 516
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 3,647,193,636
Number of extensions: 76672056
Number of successful extensions: 264321
Number of sequences better than 10.0: 85
Number of HSP's gapped: 264079
Number of HSP's successfully gapped: 179
Length of query: 445
Length of database: 1,732,582,204
Length adjustment: 135
Effective length of query: 310
Effective length of database: 1,010,438,449
Effective search space: 313235919190
Effective search space used: 313235919190
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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