Dictyostelium discoideum cDNA Clone VHK730

Sequence VHK730

ATTTAGAAAA TGATGAAATT CCACGTGATT TACCATTTTC ATTAATTTCT
TTAGATCCAG TAACTTATTC TTATTTAACT TCAGTTAGAT TAATTAATAA
TATTATGTAC CCATTCACTT TTGATCCAAC CATTAATAAA TTCACAAGTA
AATTTGTTAT TCCAGCAAAT ACTGCATTCG ATAAGATTTC ATTTGCAATT
ATTGGTGGTT TATCAACAGA ATTTTATTAT TCAGGTTTTA CAATTAATAA
TTCACCAGCT TTCGATAATG AAGGTCCATT ATTTAGTGAA TTCTACAAAG
TAAATGAAAA TACTACTTAT TCCTCTTTAG GTTATCCAAA AACTTCTGGT
TGGAGATTTA GAATCACTGA TAAATACAAT GGTTTCAGAA ATGGTTTTAT
TAAAGCTATG GGTTCAGTTG ATAGTACAAT TATTAAATTA AACTTCACTG
TCCACGATAG ACTTAATGGT GATAAACACG ATGGTTTATA TGAACTTTTA
CTCGCTTTAG TACCAGAACA ATGTATCACA CAACAATATA CTATCACTCA
CGTTGAACTT TATGATGACA ATAACATTAG TTCAATTTTC AAACTTTATT
CACCAGATTA TTACTTAAAG AATCCATTCA TTAATATTTA TGCTCAANGT
TTAGAAGTTA CTACAATCTC TACATTCT-- --------TT GGTCAAAATA
CCGTTTACCA ATTCTCATTC GAAATATTTG ATCTTGTTAA CATTTGGGGC
GTTGAATTAT TATCAAATAA TACTTATCAA CTCCCAAGTT GGGTATATAG
TATCCCAGTT GGTTCATCTC ACAATTTTGG TTATATCCAA AAATCAAACC
ATCTTTTACC AATTTATTCA CAATTACCAA CTTGTCAAGT AACTCCAACT
CCAACACCAA CTCAAACTCC AACTCAAACT CCAACTGAAA CCCCAACTCC
AACCGAAACT CCAACCGAAA CTCCAACTCA AACTCCAACT CAAACACCAA
CTCAATCACC AATTCCAAGA CCAATAACTT GTTCAAAACT TGATGATGTT
CTTAATTTCA ATAGCACAGA AACTATTTAC TGTAAAGGTA GAGGTCCAAC
CTACTGTATT GATGGCTATG GTTCAGAATG TGAAACCAAC GATGTTGATG
GAAGAATTAA ATGTACAACA AAGAGCAATT TCATGAGCTG TAAGGGTGAT
CATTTAGTTT GTAAATCAAA CTATCTTACA TGTAAAGTCA ATATTTNCGA
AGGTACACCA TTCCATGTTC ACGATTCTTC TTTACAATAA AATATTTTAA
A

Translated Amino Acid Sequence VHK730

LENDEIPRDLPFSLISLDPVTYSYLTSVRLINNIMYPFTFDPTINKFTSKFVIPANTAFD
KISFAIIGGLSTEFYYSGFTINNSPAFDNEGPLFSEFYKVNENTTYSSLGYPKTSGWRFR
ITDKYNGFRNGFIKAMGSVDSTIIKLNFTVHDRLNGDKHDGLYELLLALVPEQCITQQYT
ITHVELYDDNNISSIFKLYSPDYYLKNPFINIYAQXLEVTTISTF---

---GQNTVYQFSFEIFDLVNIWGVELLSNNTYQLPSWVYSIPVGSSHNFGYIQKSNHLLP
IYSQLPTCQVTPTPTPTQTPTQTPTETPTPTETPTETPTQTPTQTPTQSPIPRPITCSKL
DDVLNFNSTETIYCKGRGPTYCIDGYGSECETNDVDGRIKCTTKSNFMSCKGDHLVCKSN
YLTCKVNIXEGTPFHVHDSSLQ*nil

Homology VHK730 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHK730 (VHK730Q) /CSM/VH/VHK7-B/VHK730Q.Seq.d/                       1711   0.0
VHK380 (VHK380Q) /CSM/VH/VHK3-D/VHK380Q.Seq.d/                       1283   0.0
VHD539 (VHD539Q) /CSM/VH/VHD5-B/VHD539Q.Seq.d/                       1178   0.0
VHE475 (VHE475Q) /CSM/VH/VHE4-D/VHE475Q.Seq.d/                        874   0.0
VHH388 (VHH388Q) /CSM/VH/VHH3-D/VHH388Q.Seq.d/                        854   0.0
FC-IC1125 (FC-IC1125Q) /CSM/FC-IC/FC-IC1125Q.Seq.d/                   628   e-179
VSJ853 (VSJ853Q) /CSM/VS/VSJ8-C/VSJ853Q.Seq.d/                        603   e-171
VHO515 (VHO515Q) /CSM/VH/VHO5-A/VHO515Q.Seq.d/                        603   e-171
VHN694 (VHN694Q) /CSM/VH/VHN6-D/VHN694Q.Seq.d/                        603   e-171
VHJ424 (VHJ424Q) /CSM/VH/VHJ4-A/VHJ424Q.Seq.d/                        603   e-171

Homology VHK730 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(U20608) Dictyostelium discoideum unknown spore germination-...  1338   0.0    1
(BJ424424) Dictyostelium discoideum cDNA clone:ddv52l07, 5' ...  1338   0.0    1
(BJ424285) Dictyostelium discoideum cDNA clone:ddv51p19, 5' ...  1283   0.0    1
(BJ420159) Dictyostelium discoideum cDNA clone:ddv38m09, 5' ...  1178   0.0    1
(BJ443262) Dictyostelium discoideum cDNA clone:ddv52l07, 3' ...   543   0.0    2
(BJ442228) Dictyostelium discoideum cDNA clone:ddv49p06, 3' ...   535   0.0    2
(BJ437084) Dictyostelium discoideum cDNA clone:ddv33k06, 3' ...   535   0.0    2
(BJ438566) Dictyostelium discoideum cDNA clone:ddv37f11, 3' ...   535   0.0    2
(BJ445644) Dictyostelium discoideum cDNA clone:ddv60m03, 3' ...   535   0.0    2
(BJ438769) Dictyostelium discoideum cDNA clone:ddv38m09, 3' ...   535   0.0    2

Homology VHK730 vs Protein

Sequences producing significant alignments:                      (bits) Value


T18270(T18270) hypothetical protein - slime mold (Dictyostelium ...   459   e-127
AC115680_4(AC115680|pid:none) Dictyostelium discoideum chromosom...   145   5e-33
AC116984_63(AC116984|pid:none) Dictyostelium discoideum chromoso...   100   3e-19
AC115612_9(AC115612|pid:none) Dictyostelium discoideum chromosom...    96   6e-18
AC116984_70(AC116984|pid:none) Dictyostelium discoideum chromoso...    92   7e-17
AC116957_18(AC116957|pid:none) Dictyostelium discoideum chromoso...    73   4e-11
AC117075_93(AC117075|pid:none) Dictyostelium discoideum chromoso...    60   2e-07
AF001315_1(AF001315|pid:none) Dictyostelium discoideum MipAp (mi...    60   2e-07
(P22698) RecName: Full=Spore germination protein 270-11;  &B3562...    59   8e-07
AC117072_39(AC117072|pid:none) Dictyostelium discoideum chromoso...    55   7e-06

Homology VHK730 vs Genome