Dictyostelium discoideum cDNA Clone VHK402

Sequence VHK402

TTTAATGGAT GAACCATCAA CTGGTTTAGA TTCAACTACT ACTTTAGAAT
TAATGAAACA TTTTAGAGAA TTATCAAATG TAAATCAAGT TTCAAGTTTG
GTAGCATTAT TACAACCAGG TGTTGAAGTT ACAAAATTAT TTGATTTCTT
AATGATTATG AATGCTGGTC ATATGGTTTA TTTTGGACCA ATGTCAGATG
CAATTTCATA TTTTGAAGGA TTAGGATTTA AATTACCAAA ACATCATAAT
CCAGCAGAAT TTTTCCAAGA GATTGTTGAT GAACCAGAAT TATATTTTGA
AGGTGAAGGT GAACCACCAC TTAGAGGTGC CGAAGAATTT GCAAATGCAT
ACAAGAATAG CGCAATGTTC CAAAGTATTG TAAATGATTT AGATAACACT
CAACCAGATT TAACATTTTG TAAAGATAGT TCACATCTTC CAAAATATCC
AACACCTTTA TCCTATCAAA TTCGTTTAGC AAGTATTAGA GCATTTAAAA
TGTTAATTTC AAGTCAAGTT GCCGTTAGAA TGAGAATTAT AAAATCGATT
GTAATGGGTT TAATTTTGGG TTCACTCTTT TATGGTTTAG ATTTGAATCA
NACCGATGGT AAT------- ---CTTCAAT TCCAATCGTT AATATGGAAC
GTGGTGTTTT CTATCGTGAG CAAGCATCTG GCATGTATTC AATTCCAATT
TATCTCTTCA CTTTTATCGT TACCGATTTA CCATGGGTTT TCCTCTCTGC
TATTATTTAT ACAGTTCCAA TGTACTTTAT CTCTGGTCTT AGATTAGATC
CAAATGGTGC TCCATTCTTT TACCACTCCT TCATCTCATT CACAACTTAT
TTCAATTTCT CAATGTTGGC AATGGTTTTC GCAACTGTAC TTCCAACCGA
TGAAATTGCT CATGCCTTGG GTGGTGTAGC ACTTTCAATC AGTTCTTTGT
TCGCTGGTTT TATGATCCCA CCAGCTTCAA TCGCTAAAGG ATGGCATTGT
TTCTACCAAT TGGATCCAAC TACTTATCCA TTGGCAATCG TTATGATTAA
TGAATTCCAA GATTTAGAAT TCCATTGTAC AAGTAGTGAA TCAGTCACTA
TACCTAATGT TCTTACAGTT AATGGTACTT ATATTGATGT TGGCCCAATT
TGTCCAATTA CAAATGGTAA TCAAATTTTA CAACGTTATG AAATGAAACC
TGAAGATAAA TATAAATTCT TGGCTGTTAT TTTTGGTTAT TCAGTCTTTT
TCTTCATTTG TATTTTTATA GCTTNAAATT TATTAGACAT CAAACTAAAT
AAACAATATT TATAAA

Translated Amino Acid Sequence VHK402

LMDEPSTGLDSTTTLELMKHFRELSNVNQVSSLVALLQPGVEVTKLFDFLMIMNAGHMVY
FGPMSDAISYFEGLGFKLPKHHNPAEFFQEIVDEPELYFEGEGEPPLRGAEEFANAYKNS
AMFQSIVNDLDNTQPDLTFCKDSSHLPKYPTPLSYQIRLASIRAFKMLISSQVAVRMRII
KSIVMGLILGSLFYGLDLNXTDGN---

---SIPIVNMERGVFYREQASGMYSIPIYLFTFIVTDLPWVFLSAIIYTVPMYFISGLRL
DPNGAPFFYHSFISFTTYFNFSMLAMVFATVLPTDEIAHALGGVALSISSLFAGFMIPPA
SIAKGWHCFYQLDPTTYPLAIVMINEFQDLEFHCTSSESVTIPNVLTVNGTYIDVGPICP
ITNGNQILQRYEMKPEDKYKFLAVIFGYSVFFFICIFIAXNLLDIKLNKQYL*

Homology VHK402 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHK402 (VHK402Q) /CSM/VH/VHK4-A/VHK402Q.Seq.d/                       2537   0.0
AHE164 (AHE164Q) /CSM/AH/AHE1-C/AHE164Q.Seq.d/                       1342   0.0
VHK143 (VHK143Q) /CSM/VH/VHK1-B/VHK143Q.Seq.d/                       1338   0.0
AHI849 (AHI849Q) /CSM/AH/AHI8-C/AHI849Q.Seq.d/                       1336   0.0
VHK266 (VHK266Q) /CSM/VH/VHK2-C/VHK266Q.Seq.d/                       1332   0.0
AHE464 (AHE464Q) /CSM/AH/AHE4-C/AHE464Q.Seq.d/                       1332   0.0
VHL201 (VHL201Q) /CSM/VH/VHL2-A/VHL201Q.Seq.d/                       1328   0.0
AHF377 (AHF377Q) /CSM/AH/AHF3-D/AHF377Q.Seq.d/                       1326   0.0
AHB663 (AHB663Q) /CSM/AH/AHB6-C/AHB663Q.Seq.d/                       1322   0.0
AHQ715 (AHQ715Q) /CSM/AH/AHQ7-A/AHQ715Q.Seq.d/                       1318   0.0

Homology VHK402 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ442807) Dictyostelium discoideum cDNA clone:ddv51d02, 3' ...  1368   0.0    1
(BJ350392) Dictyostelium discoideum cDNA clone:dda39o15, 3' ...  1342   0.0    1
(BJ352956) Dictyostelium discoideum cDNA clone:dda48b14, 3' ...  1336   0.0    1
(BJ442901) Dictyostelium discoideum cDNA clone:ddv51e11, 3' ...  1334   0.0    1
(BJ443459) Dictyostelium discoideum cDNA clone:ddv53a02, 3' ...  1328   0.0    1
(BJ341959) Dictyostelium discoideum cDNA clone:dda8m24, 3' e...  1306   0.0    1
(AF482381) Dictyostelium discoideum ABC transporter AbcG2 (a...  1283   0.0    2
(AC117080) Dictyostelium discoideum chromosome 2 map complem...  1283   0.0    2
(BJ442976) Dictyostelium discoideum cDNA clone:ddv51c18, 3' ...  1283   0.0    2
(BJ350397) Dictyostelium discoideum cDNA clone:dda39p16, 3' ...  1283   0.0    2

Homology VHK402 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54TV1) RecName: Full=ABC transporter G family member 6; AltNam...   226   2e-57
AF482384_1(AF482384|pid:none) Dictyostelium discoideum ABC trans...   225   4e-57
(Q54TV2) RecName: Full=ABC transporter G family member 5; AltNam...   225   4e-57
AF482394_1(AF482394|pid:none) Dictyostelium discoideum ABC trans...   160   1e-37
AM920435_1226(AM920435|pid:none) Penicillium chrysogenum Wiscons...   148   6e-34
AP007164_101(AP007164|pid:none) Aspergillus oryzae RIB40 DNA, SC...   147   1e-33
AF227914_1(AF227914|pid:none) Venturia inaequalis ATP-binding ca...   143   2e-32
AJ311940_1(AJ311940|pid:none) Aspergillus fumigatus atrF gene fo...   142   4e-32
AP008207_2379(AP008207|pid:none) Oryza sativa (japonica cultivar...   142   4e-32
(Q7FMW4) RecName: Full=Pleiotropic drug resistance protein 15;  ...   142   4e-32

Homology VHK402 vs Genome