Homology VHK402 vs DNA
Query= VHK402 (VHK402Q) /CSM/VH/VHK4-A/VHK402Q.Seq.d/
(1316 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ442807) Dictyostelium discoideum cDNA clone:ddv51d02, 3' ... 1368 0.0 1
(BJ350392) Dictyostelium discoideum cDNA clone:dda39o15, 3' ... 1342 0.0 1
(BJ352956) Dictyostelium discoideum cDNA clone:dda48b14, 3' ... 1336 0.0 1
(BJ442901) Dictyostelium discoideum cDNA clone:ddv51e11, 3' ... 1334 0.0 1
(BJ443459) Dictyostelium discoideum cDNA clone:ddv53a02, 3' ... 1328 0.0 1
(BJ341959) Dictyostelium discoideum cDNA clone:dda8m24, 3' e... 1306 0.0 1
(AF482381) Dictyostelium discoideum ABC transporter AbcG2 (a... 1283 0.0 2
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 1283 0.0 2
(BJ442976) Dictyostelium discoideum cDNA clone:ddv51c18, 3' ... 1283 0.0 2
(BJ350397) Dictyostelium discoideum cDNA clone:dda39p16, 3' ... 1283 0.0 2
(BJ357628) Dictyostelium discoideum cDNA clone:dda64n03, 3' ... 1277 0.0 2
(BJ348882) Dictyostelium discoideum cDNA clone:dda34m16, 3' ... 1277 0.0 2
(AF246689) Dictyostelium discoideum ABC transporter mdrA1 (M... 1275 0.0 2
(BJ423982) Dictyostelium discoideum cDNA clone:ddv51d02, 5' ... 1209 0.0 1
(BJ366691) Dictyostelium discoideum cDNA clone:ddc39l22, 5' ... 1207 0.0 1
(BJ334883) Dictyostelium discoideum cDNA clone:dda48l03, 5' ... 1205 0.0 1
(BJ357683) Dictyostelium discoideum cDNA clone:dda64j08, 3' ... 1201 0.0 2
(BJ352854) Dictyostelium discoideum cDNA clone:dda48l03, 3' ... 1201 0.0 2
(BJ351047) Dictyostelium discoideum cDNA clone:dda41j19, 3' ... 1201 0.0 2
(BJ347778) Dictyostelium discoideum cDNA clone:dda31l01, 3' ... 1201 0.0 2
(BJ357898) Dictyostelium discoideum cDNA clone:dda65g03, 3' ... 1193 0.0 2
(BJ444530) Dictyostelium discoideum cDNA clone:ddv56m16, 3' ... 1176 0.0 2
(BJ400689) Dictyostelium discoideum cDNA clone:dds14g11, 3' ... 1126 0.0 2
(BJ353881) Dictyostelium discoideum cDNA clone:dda51b22, 3' ... 1114 0.0 1
(BJ446722) Dictyostelium discoideum cDNA clone:ddv63k14, 3' ... 1082 0.0 2
(BJ341387) Dictyostelium discoideum cDNA clone:dda6n09, 3' e... 1053 0.0 2
(BJ398256) Dictyostelium discoideum cDNA clone:dds11n14, 3' ... 1023 0.0 1
(BJ347791) Dictyostelium discoideum cDNA clone:dda31n06, 3' ... 1009 0.0 1
(BJ347779) Dictyostelium discoideum cDNA clone:dda31l02, 3' ... 1009 0.0 1
(AU034314) Dictyostelium discoideum slug cDNA, clone SLC570. 950 0.0 2
(AU269006) Dictyostelium discoideum vegetative cDNA clone:VS... 878 0.0 2
(AU269007) Dictyostelium discoideum vegetative cDNA clone:VS... 878 0.0 2
(BJ409164) Dictyostelium discoideum cDNA clone:dds39k17, 3' ... 906 0.0 1
(BJ392433) Dictyostelium discoideum cDNA clone:dds27l13, 5' ... 900 0.0 1
(BJ338291) Dictyostelium discoideum cDNA clone:dda60e21, 5' ... 888 0.0 1
(BJ354676) Dictyostelium discoideum cDNA clone:dda54l07, 3' ... 825 0.0 2
(C93189) Dictyostelium discoideum slug cDNA, clone SSM755. 809 0.0 2
(BJ391609) Dictyostelium discoideum cDNA clone:dds24e18, 5' ... 831 0.0 1
(BJ400130) Dictyostelium discoideum cDNA clone:dds8m19, 3' e... 680 0.0 2
(BJ348028) Dictyostelium discoideum cDNA clone:dda31o23, 3' ... 668 0.0 2
(BJ380968) Dictyostelium discoideum cDNA clone:ddc39l22, 3' ... 355 0.0 2
(BJ330553) Dictyostelium discoideum cDNA clone:dda31o23, 5' ... 630 e-176 1
(BJ333235) Dictyostelium discoideum cDNA clone:dda41o20, 5' ... 628 e-175 1
(BJ348972) Dictyostelium discoideum cDNA clone:dda34o24, 3' ... 603 e-173 2
(BJ337887) Dictyostelium discoideum cDNA clone:dda59f10, 5' ... 601 e-167 1
(BJ353589) Dictyostelium discoideum cDNA clone:dda50c23, 3' ... 567 e-157 1
(BJ339365) Dictyostelium discoideum cDNA clone:dda65g03, 5' ... 492 e-134 1
(BJ339428) Dictyostelium discoideum cDNA clone:dda65f11, 5' ... 482 e-131 1
(AU061001) Dictyostelium discoideum slug cDNA, clone SLC570. 448 e-121 1
(BJ397331) Dictyostelium discoideum cDNA clone:dds45m20, 5' ... 448 e-121 1
(BJ393775) Dictyostelium discoideum cDNA clone:dds32g14, 5' ... 420 e-113 2
(BJ336051) Dictyostelium discoideum cDNA clone:dda52f18, 5' ... 404 e-109 2
(BJ335665) Dictyostelium discoideum cDNA clone:dda51j06, 5' ... 394 e-106 2
(BJ396291) Dictyostelium discoideum cDNA clone:dds42k10, 5' ... 371 5e-98 1
(AU284436) Dictyostelium discoideum gamete cDNA clone:FC-AV1... 303 1e-90 2
(BJ332610) Dictyostelium discoideum cDNA clone:dda39p16, 5' ... 305 2e-78 1
(BJ366300) Dictyostelium discoideum cDNA clone:ddc38b18, 5' ... 301 5e-78 2
(BJ407619) Dictyostelium discoideum cDNA clone:dds43j06, 3' ... 297 5e-76 1
(BJ390939) Dictyostelium discoideum cDNA clone:dds14g11, 5' ... 274 8e-69 1
(BJ338497) Dictyostelium discoideum cDNA clone:dda61b24, 5' ... 270 1e-68 2
(BJ424073) Dictyostelium discoideum cDNA clone:ddv51e11, 5' ... 270 1e-68 2
(BJ334936) Dictyostelium discoideum cDNA clone:dda48g11, 5' ... 252 3e-63 2
(BJ409518) Dictyostelium discoideum cDNA clone:dds42k10, 3' ... 234 6e-61 2
(BJ336578) Dictyostelium discoideum cDNA clone:dda54l07, 5' ... 238 4e-59 2
(BJ331281) Dictyostelium discoideum cDNA clone:dda34m16, 5' ... 145 4e-58 3
(BJ332207) Dictyostelium discoideum cDNA clone:dda38g11, 5' ... 167 1e-36 1
(BJ425730) Dictyostelium discoideum cDNA clone:ddv56m16, 5' ... 137 7e-29 2
(BJ334979) Dictyostelium discoideum cDNA clone:dda48b14, 5' ... 88 1e-12 1
(AU272357) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 44 2e-04 2
(AU272356) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 44 2e-04 2
(AF482384) Dictyostelium discoideum ABC transporter AbcG5 (a... 40 0.002 4
(AF482385) Dictyostelium discoideum ABC transporter AbcG6 (a... 40 0.009 3
(DC203789) Plasmodium berghei strain ANKA cDNA clone:MG00303... 38 0.066 4
(DC213191) Plasmodium berghei strain ANKA cDNA clone:MG01477... 38 0.11 4
(DC209671) Plasmodium berghei strain ANKA cDNA clone:MG01021... 38 0.12 4
(AC192722) Pan troglodytes BAC clone CH251-627B17 from chrom... 50 0.22 1
(AC146269) Pan troglodytes BAC clone RP43-29B18 from chromos... 50 0.22 1
(AC005100) Homo sapiens BAC clone CTA-351O6 from 7, complete... 50 0.22 1
(AC079358) Homo sapiens chromosome 3 clone RP11-399H5, WORKI... 50 0.22 1
(AL451002) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 50 0.22 1
(AG085944) Pan troglodytes DNA, clone: PTB-084C08.R. 50 0.22 1
(CC779906) ZMMBBc0431J20f ZMMBBc Zea mays subsp. mays genomi... 46 0.25 2
(AC194603) Zea mays chromosome 2 clone CH201-263L17; ZMMBBc0... 48 0.85 1
(AC186379) Zea mays chromosome 2 clone CH201-323I15; ZMMBBc0... 48 0.85 1
(CL405461) ZMMBBb0418L03r ZMMBBb (HindIII) Zea mays subsp. m... 48 0.85 1
(CC415975) PUHTW39TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 48 0.85 1
(BZ669735) PUBDJ14TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 48 0.85 1
(BX323012) Zebrafish DNA sequence from clone DKEYP-46F3. 36 1.7 9
(CI573261) Oryza sativa Japonica Group cDNA, clone: J01B3084... 38 1.9 2
(EJ027147) 1095454029806 Global-Ocean-Sampling_GS-26-01-01-1... 44 2.4 2
(CU651660) Zebrafish DNA sequence from clone CH1073-112H4 in... 46 3.4 1
(BX323042) Zebrafish DNA sequence from clone DKEYP-78G2 in l... 46 3.4 1
(AL928556) Zebrafish DNA sequence from clone DKEY-63M7. 46 3.4 1
(AC157791) Mus musculus chromosome 3, clone RP24-176D22, com... 46 3.4 1
(AC116732) Mus musculus chromosome 3, clone RP23-347F4, comp... 46 3.4 1
(AC098652) Homo sapiens chromosome 1 clone RP11-24D16, compl... 46 3.4 1
(AC025971) Homo sapiens chromosome 2 clone RP11-699C20 map 2... 46 3.4 1
(CT027829) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 3.4 1
(AC204606) Zea mays chromosome 1 clone CH201-5E10; ZMMBBc000... 46 3.4 1
(AC193949) Zea mays chromosome 4 clone CH201-215J12; ZMMBBc0... 46 3.4 1
>(BJ442807) Dictyostelium discoideum cDNA clone:ddv51d02, 3' end,
single read.
Length = 693
Score = 1368 bits (690), Expect = 0.0
Identities = 693/693 (100%)
Strand = Plus / Minus
Query: 624 cttcaattccaatcgttaatatggaacgtggtgttttctatcgtgagcaagcatctggca 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 cttcaattccaatcgttaatatggaacgtggtgttttctatcgtgagcaagcatctggca 634
Query: 684 tgtattcaattccaatttatctcttcacttttatcgttaccgatttaccatgggttttcc 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tgtattcaattccaatttatctcttcacttttatcgttaccgatttaccatgggttttcc 574
Query: 744 tctctgctattatttatacagttccaatgtactttatctctggtcttagattagatccaa 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tctctgctattatttatacagttccaatgtactttatctctggtcttagattagatccaa 514
Query: 804 atggtgctccattcttttaccactccttcatctcattcacaacttatttcaatttctcaa 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atggtgctccattcttttaccactccttcatctcattcacaacttatttcaatttctcaa 454
Query: 864 tgttggcaatggttttcgcaactgtacttccaaccgatgaaattgctcatgccttgggtg 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tgttggcaatggttttcgcaactgtacttccaaccgatgaaattgctcatgccttgggtg 394
Query: 924 gtgtagcactttcaatcagttctttgttcgctggttttatgatcccaccagcttcaatcg 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gtgtagcactttcaatcagttctttgttcgctggttttatgatcccaccagcttcaatcg 334
Query: 984 ctaaaggatggcattgtttctaccaattggatccaactacttatccattggcaatcgtta 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ctaaaggatggcattgtttctaccaattggatccaactacttatccattggcaatcgtta 274
Query: 1044 tgattaatgaattccaagatttagaattccattgtacaagtagtgaatcagtcactatac 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tgattaatgaattccaagatttagaattccattgtacaagtagtgaatcagtcactatac 214
Query: 1104 ctaatgttcttacagttaatggtacttatattgatgttggcccaatttgtccaattacaa 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ctaatgttcttacagttaatggtacttatattgatgttggcccaatttgtccaattacaa 154
Query: 1164 atggtaatcaaattttacaacgttatgaaatgaaacctgaagataaatataaattcttgg 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 atggtaatcaaattttacaacgttatgaaatgaaacctgaagataaatataaattcttgg 94
Query: 1224 ctgttatttttggttattcagtctttttcttcatttgtatttttatagcttnaaatttat 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ctgttatttttggttattcagtctttttcttcatttgtatttttatagcttnaaatttat 34
Query: 1284 tagacatcaaactaaataaacaatatttataaa 1316
|||||||||||||||||||||||||||||||||
Sbjct: 33 tagacatcaaactaaataaacaatatttataaa 1
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,554,012,000
Number of extensions: 94351397
Number of successful extensions: 7222977
Number of sequences better than 10.0: 128
Length of query: 1316
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1292
Effective length of database: 97,308,875,965
Effective search space: 125723067746780
Effective search space used: 125723067746780
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home