Dictyostelium discoideum cDNA Clone VHK380

Sequence VHK380

TATTGCATAT TTAGAAAATG ATGAAATTCC ACGTGATTTA CCATTTTCAT
TAATTTCTTT AGATCCAGTA ACTTATTCTT ATTTAACTTC AGTTAGATTA
ATTAATAATA TTATGTACCC ATTCACTTTT GATCCAACCA TTAATAAATT
CACAAGTAAA TTTGTTATTC CAGCAAATAC TGCATTCGAT AAGATTTCAT
TTGCAATTAT TGGTGGTTTA TCAACAGAAT TTTATTATTC AGGTTTTACA
ATTAATAATT CACCAGCTTT CGATAATGAA GGTCCATTAT TTAGTGAATT
CTACAAAGTA AATGAAAATA CTACTTATTC CTCTTTAGGT TATCCAAAAA
CTTCTGGTTG GAGATTTAGA ATCACTGATA AATACAATGG TTTCAGAAAT
GGTTTTATTA AAGCTATGGG TTCAGTTGAT AGTACAATTA TTAAATTAAA
CTTCACTGTC CACGATAGAC TTAATGGTGA TAAACACGAT GGTTTATATG
AACTTTTACT CGCTTTAGTA CCAGAACAAT GTATCACACA ACAATATACT
ATCACTCACG TTGAACTTTA TGATGACAAT AACATTAGTT CAATTTTCAA
ACTTTATTCA CCAGATTATT ACTTAAAGAA TCCATTCATT AATATTTATG
CTCAAGG--- -------TAA CTCCAACTCC AACACCAANT CAAACTCCAA
CTCAAACTCC AACTGAAACC CCAACTCCAA CAGAAACTCC ANCCGAAACT
CCAACTCAAA CTCCAACTCA AACACCAACT CAATCACCAA TTCCAAGACC
AATAACTTGT TCAAAANTTG ATGATGTTCT TAATTTCAAT AGCACAGNAA
CTATTTACTG TAAAGGTAGA GGTCCAACCT ACTGTATTGA TGGNTATGGT
TCAGAATGTG AAACCAACGA TGTTGATGGA AGAATTAAAT GTACAACAAA
GAGCAATTTC ATGAGCTGTA AGGGTGATCA TTTAGTTTGT AAATCAAACT
ATCTTACATG TAAAGTCAAT ATTTCTGAAG GTACACCATT CCATGTTCAC
GATTCTTCTT TACAATAAAA TATTTTAAAT AACCTATCAA AGAAATAAAT
AAATTTTAAA ATT

Translated Amino Acid Sequence VHK380

IAYLENDEIPRDLPFSLISLDPVTYSYLTSVRLINNIMYPFTFDPTINKFTSKFVIPANT
AFDKISFAIIGGLSTEFYYSGFTINNSPAFDNEGPLFSEFYKVNENTTYSSLGYPKTSGW
RFRITDKYNGFRNGFIKAMGSVDSTIIKLNFTVHDRLNGDKHDGLYELLLALVPEQCITQ
QYTITHVELYDDNNISSIFKLYSPDYYLKNPFINIYAQ---

---TPTPTPXQTPTQTPTETPTPTETPXETPTQTPTQTPTQSPIPRPITCSKXDDVLNFN
STXTIYCKGRGPTYCIDGYGSECETNDVDGRIKCTTKSNFMSCKGDHLVCKSNYLTCKVN
ISEGTPFHVHDSSLQ*nilnnlskk*infki

Homology VHK380 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHK380 (VHK380Q) /CSM/VH/VHK3-D/VHK380Q.Seq.d/                       1302   0.0
VHK730 (VHK730Q) /CSM/VH/VHK7-B/VHK730Q.Seq.d/                       1283   0.0
VHD539 (VHD539Q) /CSM/VH/VHD5-B/VHD539Q.Seq.d/                       1178   0.0
VHH388 (VHH388Q) /CSM/VH/VHH3-D/VHH388Q.Seq.d/                        870   0.0
VHE475 (VHE475Q) /CSM/VH/VHE4-D/VHE475Q.Seq.d/                        823   0.0
VSJ853 (VSJ853Q) /CSM/VS/VSJ8-C/VSJ853Q.Seq.d/                        668   0.0
VHN694 (VHN694Q) /CSM/VH/VHN6-D/VHN694Q.Seq.d/                        668   0.0
SHC383 (SHC383Q) /CSM/SH/SHC3-D/SHC383Q.Seq.d/                        668   0.0
VHD343 (VHD343Q) /CSM/VH/VHD3-B/VHD343Q.Seq.d/                        662   0.0
VHO515 (VHO515Q) /CSM/VH/VHO5-A/VHO515Q.Seq.d/                        658   0.0

Homology VHK380 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(U20608) Dictyostelium discoideum unknown spore germination-...  1298   0.0    1
(BJ424285) Dictyostelium discoideum cDNA clone:ddv51p19, 5' ...  1298   0.0    1
(BJ424424) Dictyostelium discoideum cDNA clone:ddv52l07, 5' ...  1283   0.0    1
(BJ420159) Dictyostelium discoideum cDNA clone:ddv38m09, 5' ...  1178   0.0    1
(BJ422452) Dictyostelium discoideum cDNA clone:ddv45p21, 5' ...   603   0.0    3
(BJ420599) Dictyostelium discoideum cDNA clone:ddv39f20, 5' ...   819   0.0    1
(AU270579) Dictyostelium discoideum vegetative cDNA clone:VS...   636   e-178  1
(BJ445244) Dictyostelium discoideum cDNA clone:ddv58k24, 3' ...   636   e-178  1
(BJ443118) Dictyostelium discoideum cDNA clone:ddv51p19, 3' ...   636   e-178  1
(BJ438769) Dictyostelium discoideum cDNA clone:ddv38m09, 3' ...   636   e-178  1

Homology VHK380 vs Protein

Sequences producing significant alignments:                      (bits) Value


T18270(T18270) hypothetical protein - slime mold (Dictyostelium ...   451   e-125
AC115680_4(AC115680|pid:none) Dictyostelium discoideum chromosom...   144   1e-32
AC116984_63(AC116984|pid:none) Dictyostelium discoideum chromoso...   100   3e-19
AC115612_9(AC115612|pid:none) Dictyostelium discoideum chromosom...    96   5e-18
AC116984_70(AC116984|pid:none) Dictyostelium discoideum chromoso...    92   5e-17
AC116957_18(AC116957|pid:none) Dictyostelium discoideum chromoso...    74   1e-11
AF001315_1(AF001315|pid:none) Dictyostelium discoideum MipAp (mi...    60   2e-07
AC117075_93(AC117075|pid:none) Dictyostelium discoideum chromoso...    60   2e-07
AC117072_39(AC117072|pid:none) Dictyostelium discoideum chromoso...    58   1e-06
AC116957_104(AC116957|pid:none) Dictyostelium discoideum chromos...    54   1e-05

Homology VHK380 vs Genome