Homology VHK326 vs Protein
Query= VHK326 (VHK326Q) /CSM/VH/VHK3-B/VHK326Q.Seq.d/
(1325 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q550C1) RecName: Full=Protein TAPT1 homolog; 338 4e-91
AC116977_15(AC116977|pid:none) Dictyostelium discoideum chromoso... 338 4e-91
AJ719766_1(AJ719766|pid:none) Gallus gallus mRNA for hypothetica... 127 1e-27
(Q6NXT6) RecName: Full=Transmembrane anterior posterior transfor... 126 2e-27
AK296104_1(AK296104|pid:none) Homo sapiens cDNA FLJ52307 complet... 126 2e-27
CQ834552_1(CQ834552|pid:none) Sequence 423 from Patent WO2004058... 126 2e-27
(Q4VBD2) RecName: Full=Transmembrane anterior posterior transfor... 126 2e-27
JI169439_1(JI169439|pid:none) TSA: Ascaris suum ASCF_3920_1965 m... 125 5e-27
(Q9U3H8) RecName: Full=Protein TAPT1 homolog; &Z81514_10(Z81514... 123 2e-26
(Q9VED0) RecName: Full=Protein TAPT1 homolog; &AE014297_2681(AE... 121 1e-25
FQ311472_287(FQ311472|pid:none) Sporisorium reilianum SRZ2 chrom... 116 3e-24
AM920430_203(AM920430|pid:none) Penicillium chrysogenum Wisconsi... 111 1e-22
AK299163_1(AK299163|pid:none) Homo sapiens cDNA FLJ59140 complet... 108 7e-22
FQ857221_47(FQ857221|pid:none) Piriformospora indica PIRI_contig... 108 7e-22
AM270229_1(AM270229|pid:none) Aspergillus niger contig An11c0120... 105 8e-21
AE017348_169(AE017348|pid:none) Cryptococcus neoformans var. neo... 105 8e-21
CR380955_291(CR380955|pid:none) Candida glabrata strain CBS138 c... 104 1e-20
CR382138_667(CR382138|pid:none) Debaryomyces hansenii strain CBS... 101 1e-19
FQ790351_141(FQ790351|pid:none) Botryotinia fuckeliana isolate T... 100 1e-19
CP002498_323(CP002498|pid:none) Eremothecium cymbalariae DBVPG#7... 100 1e-19
FN357887_3(FN357887|pid:none) Schistosoma mansoni genome sequenc... 100 2e-19
HE612859_410(HE612859|pid:none) Tetrapisispora phaffii CBS 4417 ... 98 1e-18
FM992693_62(FM992693|pid:none) Candida dubliniensis CD36 chromos... 96 5e-18
CP000499_94(CP000499|pid:none) Scheffersomyces stipitis CBS 6054... 96 5e-18
(P40085) RecName: Full=Protein TAPT1 homolog; &FN393067_241(FN3... 96 5e-18
HE605202_285(HE605202|pid:none) Candida parapsilosis strain CDC3... 96 5e-18
AC090882_6(AC090882|pid:none) Oryza sativa chromosome 3 BAC OSJN... 94 1e-17
CR382126_547(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 94 2e-17
FN392322_473(FN392322|pid:none) Pichia pastoris GS115 chromosome... 93 3e-17
CP000594_272(CP000594|pid:none) Ostreococcus lucimarinus CCE9901... 92 5e-17
CP002684_7514(CP002684|pid:none) Arabidopsis thaliana chromosome... 90 3e-16
AY064002_1(AY064002|pid:none) Arabidopsis thaliana unknown prote... 90 3e-16
AC012563_19(AC012563|pid:none) Arabidopsis thaliana chromosome 1... 90 3e-16
AC091701_9(AC091701|pid:none) Trypanosoma brucei chromosome 8 cl... 71 2e-10
CR940348_678(CR940348|pid:none) Theileria annulata strain Ankara... 67 2e-09
FR798981_16(FR798981|pid:none) Leishmania braziliensis MHOM/BR/7... 67 3e-09
FJ892241_1(FJ892241|pid:none) Anopheles gambiae S isolate KL47B(... 66 5e-09
FJ892221_1(FJ892221|pid:none) Anopheles gambiae M isolate KL227B... 66 5e-09
FJ892251_1(FJ892251|pid:none) Anopheles gambiae M isolate KL17B(... 66 5e-09
FJ892279_1(FJ892279|pid:none) Anopheles arabiensis isolate aar26... 66 5e-09
AL844502_214(AL844502|pid:none) Plasmodium falciparum 3D7 chromo... 65 1e-08
AM910990_189(AM910990|pid:none) Plasmodium knowlesi strain H chr... 64 2e-08
AM502225_33(AM502225|pid:none) Leishmania infantum chromosome 7.... 59 5e-07
FR823381_225(FR823381|pid:none) Neospora caninum Liverpool compl... 49 7e-04
>(Q550C1) RecName: Full=Protein TAPT1 homolog;
Length = 828
Score = 338 bits (867), Expect = 4e-91
Identities = 171/187 (91%), Positives = 171/187 (91%)
Frame = +2
Query: 638 NALLXLMISNQFVELKGSVFKRFEKENLFQISCSDIVERFQAFIFLTIIIFQNLSDLNWD 817
NALL LMISNQFVELKGSVFKRFEKENLFQISCSDIVERFQAFIFLTIIIFQNLSDLNWD
Sbjct: 599 NALLTLMISNQFVELKGSVFKRFEKENLFQISCSDIVERFQAFIFLTIIIFQNLSDLNWD 658
Query: 818 LSWDFAINMLTVVGTVWGSEVLVDAIKHAFITKFNKFSPQMYSKFFVLLSDTIVDPRNRN 997
LSWDFAINMLTVVGTVWGSEVLVDAIKHAFITKFNKFSPQMYSKFFVLLSDTIVDPRNRN
Sbjct: 659 LSWDFAINMLTVVGTVWGSEVLVDAIKHAFITKFNKFSPQMYSKFFVLLSDTIVDPRNRN 718
Query: 998 FTESSWGVNNIIGFVPFPLASIVVRVFHKFIPSKGIFGIFLMVQIYXXXXXXXXXXXXXX 1177
FTESSWGVNNIIGFVPFPLASIVVRVFHKFIPSKGIFGIFLMVQIY
Sbjct: 719 FTESSWGVNNIIGFVPFPLASIVVRVFHKFIPSKGIFGIFLMVQIYICLVLLKIFIKIII 778
Query: 1178 XGQCLSK 1198
GQCLSK
Sbjct: 779 LGQCLSK 785
Score = 169 bits (427), Expect = 4e-40
Identities = 96/159 (60%), Positives = 96/159 (60%)
Frame = +3
Query: 78 MEDKNILYESIPTSTNNNELLPPQLTPIKPNITQEEQDLLDNIVKNEXXXXXXXXXXXXX 257
MEDKNILYESIPTSTNNNELLP QL PIKPNITQEEQDLLDNIVKNE
Sbjct: 1 MEDKNILYESIPTSTNNNELLPLQLIPIKPNITQEEQDLLDNIVKNESIIPMSPKIPINI 60
Query: 258 XXXXXXXXXXXXXXXXXXXXXXXTNSNSNSSGNLKDSFDLNSVIDSTCVMTSPIAVSPTX 437
TNSNSNSSGNLKDSFDLNSVIDSTCVMTSPIAVSP
Sbjct: 61 NNNNTINNNNNNNSNNVSSGNHITNSNSNSSGNLKDSFDLNSVIDSTCVMTSPIAVSPPI 120
Query: 438 XXXXXXXXXXXXXXXXXXXXXXXCTNDNQELINILLNKN 554
CTNDNQELINILLNKN
Sbjct: 121 INKLINNKENILNINGILENNINCTNDNQELINILLNKN 159
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,229,412,489
Number of extensions: 35536440
Number of successful extensions: 94969
Number of sequences better than 10.0: 44
Number of HSP's gapped: 94863
Number of HSP's successfully gapped: 46
Length of query: 441
Length of database: 1,732,582,204
Length adjustment: 135
Effective length of query: 306
Effective length of database: 1,010,438,449
Effective search space: 309194165394
Effective search space used: 309194165394
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home