Dictyostelium discoideum cDNA Clone VHK326

Sequence VHK326

TAATAAACAC ACACACATAA TTTTTATATC TTCTCATAGT TTTAAAAATT
ATTAATAATA TTTTAGAGAA TTCCAATATG GAAGATAAAA ACATTCTTTA
TGAATCAATT CCGACTAGTA CAAATAATAA TGAACTATTA CCACCACAAT
TAACACCAAT AAAACCAAAC ATTACACAAG AAGAACAAGA TTTATTAGAT
AATATTGTAA AAAATGAATC TATAATTCCA ATGTCACCAA AAATACCAAT
TAATATTAAT AATAATAATA CTATTAATAA CAATAATAAT AATAATAGTA
ATAATGTTAG TAGTGGTAAT CATATAACAA ATAGTAATAG TAATAGTAGT
GGTAATTTAA AGGATAGTTT TGATTTAAAT TCTGTAATTG ATTCAACTTG
TGTTATGACA TCACCAATTG CAGTTTCACC AACAATCATT AATAAATTAA
TTAACAATAA GGAAAACATT TTAAATATTA ACGGTATCCT CGAGAATAAT
ATCAATTGTA CCAATGATAA TCAAGAATTA ATTAATATAC TTTTAAATAA
AAATCAATTA CAACAACAGC AACAACAACA ACAACAATTA TATTTACAAC
AACAACAATT ACAACAATTA CAACAAC--- -------AAT GCATTGTTAN
CATTGATGAT ATCAAATCAA TTTGTTGAAT TAAAAGGATC AGTATTTAAA
AGATTTGAAA AGGAGAATTT ATTTCAAATT TCATGTAGTG ATATTGTAGA
GAGATTCCAA GCATTTATTT TCCTTACAAT TATTATTTTT CAAAACCTTT
CAGATTTAAA TTGGGATTTA TCTTGGGATT TTGCAATTAA TATGTTAACA
GTGGTTGGTA CTGTTTGGGG TTCTGAAGTT TTAGTTGATG CGATCAAACA
TGCTTTTATC ACTAAATTCA ATAAATTCTC ACCTCAAATG TATTCAAAAT
TCTTTGTACT CTTATCCGAT ACAATAGTTG ACCCAAGGAA TAGAAATTTC
ACTGAAAGTT CATGGGGTGT AAATAATATA ATTGGTTTTG TACCATTTCC
ATTAGCTTCA ATTGTTGTAA GAGTATTTCA TAAATTCATT CCATCAAAAG
GTATTTTTGG TATATTTTTA ATGGTTCAAA TTTATATATG TCTTGTACTT
TTAAAAATAT TTATAAAAAT CATTATCCTC GGTCAATGTT TATCAAAAAC
CACCAATTAT GATAACACAA CAACAACTAT TTTATCATCA TCATCATCTT
CATCATCATC AAATTCATTA AATACCACTT CAACAACATC AACCTCAACT
TCAACAACAA ANNATAAAAA AAACA

Translated Amino Acid Sequence VHK326

intht*FLYLLIVLKIINNILENSNMEDKNILYESIPTSTNNNELLPPQLTPIKPNITQE
EQDLLDNIVKNESIIPMSPKIPININNNNTINNNNNNNSNNVSSGNHITNSNSNSSGNLK
DSFDLNSVIDSTCVMTSPIAVSPTIINKLINNKENILNINGILENNINCTNDNQELINIL
LNKNQLQQQQQQQQQLYLQQQQLQQLQQ---

---NALLXLMISNQFVELKGSVFKRFEKENLFQISCSDIVERFQAFIFLTIIIFQNLSDL
NWDLSWDFAINMLTVVGTVWGSEVLVDAIKHAFITKFNKFSPQMYSKFFVLLSDTIVDPR
NRNFTESSWGVNNIIGFVPFPLASIVVRVFHKFIPSKGIFGIFLMVQIYICLVLLKIFIK
IIILGQCLSKTTNYDNTTTTILSSSSSSSSSNSLNTTSTTSTSTSTTXXKKN

Homology VHK326 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHK326 (VHK326Q) /CSM/VH/VHK3-B/VHK326Q.Seq.d/                       1176   0.0
CHL590 (CHL590Q) /CSM/CH/CHL5-D/CHL590Q.Seq.d/                       1176   0.0
AFA251 (AFA251Q) /CSM/AF/AFA2-C/AFA251Q.Seq.d/                       1176   0.0
VHL639 (VHL639Q) /CSM/VH/VHL6-B/VHL639Q.Seq.d/                       1168   0.0
CHI232 (CHI232Q) /CSM/CH/CHI2-B/CHI232Q.Seq.d/                       1168   0.0
CHL245 (CHL245Q) /CSM/CH/CHL2-B/CHL245Q.Seq.d/                       1162   0.0
CHP750 (CHP750Q) /CSM/CH/CHP7-C/CHP750Q.Seq.d/                       1070   0.0
SHL353 (SHL353Q) /CSM/SH/SHL3-C/SHL353Q.Seq.d/                        496   e-139
VHL745 (VHL745Q) /CSM/VH/VHL7-B/VHL745Q.Seq.d/                        476   e-133
CHN218 (CHN218Q) /CSM/CH/CHN2-A/CHN218Q.Seq.d/                        476   e-133

Homology VHK326 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ442891) Dictyostelium discoideum cDNA clone:ddv51d07, 3' ...  1176   0.0    1
(BJ382753) Dictyostelium discoideum cDNA clone:ddc45c23, 3' ...  1176   0.0    1
(BJ443873) Dictyostelium discoideum cDNA clone:ddv54m10, 3' ...  1168   0.0    1
(BJ380521) Dictyostelium discoideum cDNA clone:ddc38o08, 3' ...  1168   0.0    1
(BJ382318) Dictyostelium discoideum cDNA clone:ddc44i12, 3' ...  1116   0.0    2
(BJ342777) Dictyostelium discoideum cDNA clone:dda1e14, 3' e...  1068   0.0    2
(BJ383581) Dictyostelium discoideum cDNA clone:ddc53d13, 3' ...   902   0.0    2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...   842   0.0    4
(BJ366287) Dictyostelium discoideum cDNA clone:ddc38o08, 5' ...   410   0.0    2
(BJ397521) Dictyostelium discoideum cDNA clone:dds46j13, 5' ...   410   0.0    2

Homology VHK326 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q550C1) RecName: Full=Protein TAPT1 homolog;                         338   4e-91
AC116977_15(AC116977|pid:none) Dictyostelium discoideum chromoso...   338   4e-91
AJ719766_1(AJ719766|pid:none) Gallus gallus mRNA for hypothetica...   127   1e-27
(Q6NXT6) RecName: Full=Transmembrane anterior posterior transfor...   126   2e-27
AK296104_1(AK296104|pid:none) Homo sapiens cDNA FLJ52307 complet...   126   2e-27
CQ834552_1(CQ834552|pid:none) Sequence 423 from Patent WO2004058...   126   2e-27
(Q4VBD2) RecName: Full=Transmembrane anterior posterior transfor...   126   2e-27
JI169439_1(JI169439|pid:none) TSA: Ascaris suum ASCF_3920_1965 m...   125   5e-27
(Q9U3H8) RecName: Full=Protein TAPT1 homolog;  &Z81514_9(Z81514|...   123   2e-26
(Q9VED0) RecName: Full=Protein TAPT1 homolog;  &AE014297_2681(AE...   121   1e-25

Homology VHK326 vs Genome