Homology VHK326 vs DNA
Query= VHK326 (VHK326Q) /CSM/VH/VHK3-B/VHK326Q.Seq.d/
(1325 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ442891) Dictyostelium discoideum cDNA clone:ddv51d07, 3' ... 1176 0.0 1
(BJ382753) Dictyostelium discoideum cDNA clone:ddc45c23, 3' ... 1176 0.0 1
(BJ443873) Dictyostelium discoideum cDNA clone:ddv54m10, 3' ... 1168 0.0 1
(BJ380521) Dictyostelium discoideum cDNA clone:ddc38o08, 3' ... 1168 0.0 1
(BJ382318) Dictyostelium discoideum cDNA clone:ddc44i12, 3' ... 1116 0.0 2
(BJ342777) Dictyostelium discoideum cDNA clone:dda1e14, 3' e... 1068 0.0 2
(BJ383581) Dictyostelium discoideum cDNA clone:ddc53d13, 3' ... 902 0.0 2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 842 0.0 4
(BJ366287) Dictyostelium discoideum cDNA clone:ddc38o08, 5' ... 410 0.0 2
(BJ397521) Dictyostelium discoideum cDNA clone:dds46j13, 5' ... 410 0.0 2
(BJ368768) Dictyostelium discoideum cDNA clone:ddc48c06, 5' ... 410 0.0 2
(BJ425039) Dictyostelium discoideum cDNA clone:ddv54m10, 5' ... 410 0.0 2
(BJ424063) Dictyostelium discoideum cDNA clone:ddv51d07, 5' ... 410 0.0 2
(BJ425027) Dictyostelium discoideum cDNA clone:ddv54j11, 5' ... 410 0.0 2
(BJ328119) Dictyostelium discoideum cDNA clone:dda23c03, 5' ... 410 0.0 2
(BJ367814) Dictyostelium discoideum cDNA clone:ddc44i12, 5' ... 410 0.0 2
(BJ370029) Dictyostelium discoideum cDNA clone:ddc52l19, 5' ... 392 0.0 2
(BJ370269) Dictyostelium discoideum cDNA clone:ddc53d13, 5' ... 410 0.0 2
(BJ411212) Dictyostelium discoideum cDNA clone:ddv3n12, 5' e... 402 e-175 2
(BJ368213) Dictyostelium discoideum cDNA clone:ddc45c23, 5' ... 343 e-137 2
(BJ408684) Dictyostelium discoideum cDNA clone:dds46j13, 3' ... 496 e-135 1
(BJ383402) Dictyostelium discoideum cDNA clone:ddc52l19, 3' ... 414 e-111 1
(BJ384037) Dictyostelium discoideum cDNA clone:ddc48c06, 3' ... 147 1e-30 1
(BJ364128) Dictyostelium discoideum cDNA clone:ddc30i02, 5' ... 103 2e-17 1
(FC820031) Sr_pAMT7_016i07_T7 S. ratti mixed stage pAMP Stro... 64 1e-05 1
(CP000382) Clostridium novyi NT, complete genome. 38 5e-05 20
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 1e-04 21
(AE014838) Plasmodium falciparum 3D7 chromosome 11 section 3... 34 2e-04 14
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s... 40 0.001 17
(AL844509) Plasmodium falciparum chromosome 13. 36 0.002 16
(CP001047) Mycoplasma arthritidis 158L3-1, complete genome. 38 0.002 19
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 34 0.003 14
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 34 0.003 14
(AL031745) Plasmodium falciparum DNA from MAL1P2. 34 0.005 16
(AM285303) Spiroplasma citri GII3-3X chromosome, contig Cont... 34 0.005 9
(AC116123) Mus musculus chromosome 6, clone RP23-87I4, compl... 36 0.008 9
(AC018850) Homo sapiens chromosome 3 clone RP11-416D22 map 3... 42 0.012 8
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 0.013 15
(CS468878) Sequence 69 from Patent EP1748080. 36 0.014 13
(CS468877) Sequence 68 from Patent EP1748080. 36 0.014 13
(CS419355) Sequence 69 from Patent WO2006094836. 36 0.014 13
(CS419354) Sequence 68 from Patent WO2006094836. 36 0.014 13
(DD194611) Method and nucleic acids for the analysis of a co... 36 0.019 7
(AX825171) Sequence 5 from Patent WO03072812. 36 0.019 7
(BD428844) Method and nucleic acids for pharmacogenomic meth... 36 0.021 6
(AX348323) Sequence 18 from Patent WO0202806. 36 0.021 6
(AX345121) Sequence 192 from Patent WO0200928. 36 0.021 6
(CL048081) CH216-67F5_RM1.1 CH216 Xenopus (Silurana) tropica... 52 0.028 2
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 34 0.032 16
(AY955840) Paracoccidioides brasiliensis strain Pb18 mitocho... 36 0.034 6
(AC132277) Mus musculus BAC clone RP24-344C7 from chromosome... 40 0.041 6
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 34 0.042 13
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 40 0.043 9
(CD197275) MS1-0095G-V318-B06-U.B MS1-0095 Schistosoma manso... 36 0.045 2
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ... 32 0.052 13
(AC198294) MACACA MULATTA BAC clone CH250-491I20 from chromo... 52 0.055 1
(CL130026) ISB1-97J5_Sp6.1 ISB1 Xenopus (Silurana) tropicali... 52 0.055 1
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 46 0.060 18
(AX323522) Sequence 10 from Patent WO0192565. 42 0.063 3
(AC021997) Homo sapiens chromosome 3p clone RP11-114K9, WORK... 36 0.063 8
(DD010735) Diagnosis of known genetic Parameters within the ... 40 0.077 14
(AF083031) Guillardia theta nucleomorph chromosome 3, comple... 38 0.077 11
(AF069098) Uroleucon rurale large subunit ribosomal RNA gene... 40 0.083 3
(AF069097) Uroleucon helianthicola large subunit ribosomal R... 40 0.083 3
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 0.085 13
(AF287134) Ochromonas danica mitochondrial DNA, complete gen... 34 0.085 7
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 38 0.091 14
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 32 0.095 15
(BD452807) Diagnosis of Diseases Associated with tumor suppr... 38 0.11 4
(AX251286) Sequence 254 from Patent WO0168912. 38 0.11 4
(AL356516) Human DNA sequence from clone RP11-75J9 on chromo... 40 0.12 6
(AM485540) Vitis vinifera contig VV78X111537.8, whole genome... 44 0.12 6
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4... 34 0.15 14
(BZ049137) jnr21g08.b1 B.oleracea001 Brassica oleracea genom... 36 0.16 3
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 32 0.16 17
(AL844506) Plasmodium falciparum chromosome 7. 32 0.16 18
(AL929355) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 0.16 15
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 34 0.17 18
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 42 0.17 18
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 34 0.18 13
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 36 0.19 14
(AC210332) Populus trichocarpa clone POP017-D18, complete se... 50 0.22 1
(AX811312) Sequence 1 from Patent WO03062469. 50 0.22 1
(AP001876) Homo sapiens genomic DNA, chromosome 11 clone:CTD... 50 0.22 1
(AC079145) Homo sapiens BAC clone RP11-42N12 from 2, complet... 50 0.22 1
(AC127534) Homo sapiens chromosome 17 clone CTD-2517E17 map ... 50 0.22 1
(AC021877) Homo sapiens chromosome 2 clone RP11-17L8, WORKIN... 50 0.22 1
(AC021174) Homo sapiens chromosome 11 clone RP11-683D16, WOR... 50 0.22 1
(AQ314110) RPCI11-102J21.TJ RPCI-11 Homo sapiens genomic clo... 50 0.22 1
(EG697893) RCSA628TP Castor bean cDNA library from seeds (12... 50 0.22 1
(EG692899) RCSAX76TP Castor bean cDNA library from seeds (12... 50 0.22 1
(EG690693) RCSAA77TP Castor bean cDNA library from seeds (12... 50 0.22 1
(CU308590) Populus EST from severe drought-stressed tension ... 50 0.22 1
(AC169926) Macaca mulatta clone CH250-271B14, WORKING DRAFT ... 46 0.23 4
(EF067921) Thalassiosira pseudonana chloroplast, complete ge... 36 0.26 10
(AC159639) Mus musculus BAC clone RP24-79M15 from chromosome... 38 0.27 7
(BX950217) Zebrafish DNA sequence from clone DKEY-192L17 in ... 34 0.30 11
(AC185007) Bos taurus clone CH240-279A9, WORKING DRAFT SEQUE... 32 0.31 9
(AC209620) Mus musculus chromosome 14 clone RP24-321G17, WOR... 38 0.31 8
(AJ404228) Saccharomyces douglasii mitochondrial tRNA gene c... 32 0.31 6
>(BJ442891) Dictyostelium discoideum cDNA clone:ddv51d07, 3' end,
single read.
Length = 688
Score = 1176 bits (593), Expect = 0.0
Identities = 596/596 (100%)
Strand = Plus / Minus
Query: 638 aatgcattgttancattgatgatatcaaatcaatttgttgaattaaaaggatcagtattt 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aatgcattgttancattgatgatatcaaatcaatttgttgaattaaaaggatcagtattt 629
Query: 698 aaaagatttgaaaaggagaatttatttcaaatttcatgtagtgatattgtagagagattc 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aaaagatttgaaaaggagaatttatttcaaatttcatgtagtgatattgtagagagattc 569
Query: 758 caagcatttattttccttacaattattatttttcaaaacctttcagatttaaattgggat 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 caagcatttattttccttacaattattatttttcaaaacctttcagatttaaattgggat 509
Query: 818 ttatcttgggattttgcaattaatatgttaacagtggttggtactgtttggggttctgaa 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ttatcttgggattttgcaattaatatgttaacagtggttggtactgtttggggttctgaa 449
Query: 878 gttttagttgatgcgatcaaacatgcttttatcactaaattcaataaattctcacctcaa 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gttttagttgatgcgatcaaacatgcttttatcactaaattcaataaattctcacctcaa 389
Query: 938 atgtattcaaaattctttgtactcttatccgatacaatagttgacccaaggaatagaaat 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 atgtattcaaaattctttgtactcttatccgatacaatagttgacccaaggaatagaaat 329
Query: 998 ttcactgaaagttcatggggtgtaaataatataattggttttgtaccatttccattagct 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttcactgaaagttcatggggtgtaaataatataattggttttgtaccatttccattagct 269
Query: 1058 tcaattgttgtaagagtatttcataaattcattccatcaaaaggtatttttggtatattt 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tcaattgttgtaagagtatttcataaattcattccatcaaaaggtatttttggtatattt 209
Query: 1118 ttaatggttcaaatttatatatgtcttgtacttttaaaaatatttataaaaatcattatc 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttaatggttcaaatttatatatgtcttgtacttttaaaaatatttataaaaatcattatc 149
Query: 1178 ctcggtcaatgtttatcaaaaaccaccaattatgataacacaacaacaactatttt 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ctcggtcaatgtttatcaaaaaccaccaattatgataacacaacaacaactatttt 93
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,584,961,048
Number of extensions: 141698845
Number of successful extensions: 11790560
Number of sequences better than 10.0: 563
Length of query: 1325
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1301
Effective length of database: 97,308,875,965
Effective search space: 126598847630465
Effective search space used: 126598847630465
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home