Dictyostelium discoideum cDNA Clone VHK275

Sequence VHK275

AAACAAATAT TAGATAAAAA CGATCGTATT ATTATATAAT TTTCATAATA
TATATATATA AATCTTTTTA TTCTTTTAAT TTTTTCAAAA ACCAAAAAAA
AAA------- ---AAAACAT TGCTGATTTC GTCGATCCTG ATATCCTCAA
ACGTTTGGAG GAATTGGAGA TGGAAGAAGA AGCTTTCCTC GAAGAGTTAA
AGAATGCCGA AGACGATGAA GAATCTGATC TCGATGAAGA GAACGAAGCA
CTCTATGACG AAATCCAAGA GAAGAAACAC GAACTTCGTA TCAATCATCA
AATTAAAGAC TCTTCAAAAC CACAATTATC CAAAGGTCGT AGAGGTATCG
ATACTAAAGA GATGGCTTCT CATTTGAAAT CTATGCATCA TGAAGATGAT
GAAATCGGTG ATATCATCCA AAGTGTACGT GATCATTCCA AGTCTCGTAT
CTCTGGTAAG AAACGTTCTC GTTCAGCCTC ACGTTCAGAC TCTCAAGCTC
CAACCTCTGA AGAAAGAGGT CTCTCTCTCA ATCGTTCAAA ATCACGTCAA
CGTTCTACCA CCAGAATCGC TTCTCCTG

Translated Amino Acid Sequence VHK275

tnir*KRSYYYIIFIIYIYKSFYSFNFFKNQKK---

---NIADFVDPDILKRLEELEMEEEAFLEELKNAEDDEESDLDEENEALYDEIQEKKHEL
RINHQIKDSSKPQLSKGRRGIDTKEMASHLKSMHHEDDEIGDIIQSVRDHSKSRISGKKR
SRSASRSDSQAPTSEERGLSLNRSKSRQRSTTRIASP

Homology VHK275 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHK275 (VHK275Q) /CSM/VH/VHK2-D/VHK275Q.Seq.d/                        922   0.0
VHA843 (VHA843Q) /CSM/VH/VHA8-B/VHA843Q.Seq.d/                        922   0.0
VHA814 (VHA814Q) /CSM/VH/VHA8-A/VHA814Q.Seq.d/                        922   0.0
VHB452 (VHB452Q) /CSM/VH/VHB4-C/VHB452Q.Seq.d/                        914   0.0
VHI113 (VHI113Q) /CSM/VH/VHI1-A/VHI113Q.Seq.d/                        906   0.0
VHB381 (VHB381Q) /CSM/VH/VHB3-D/VHB381Q.Seq.d/                        906   0.0
VHB340 (VHB340Q) /CSM/VH/VHB3-B/VHB340Q.Seq.d/                        906   0.0
VHL275 (VHL275Q) /CSM/VH/VHL2-D/VHL275Q.Seq.d/                        902   0.0
VHD518 (VHD518Q) /CSM/VH/VHD5-A/VHD518Q.Seq.d/                        900   0.0
VHL631 (VHL631Q) /CSM/VH/VHL6-B/VHL631Q.Seq.d/                        882   0.0

Homology VHK275 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ443063) Dictyostelium discoideum cDNA clone:ddv51e20, 3' ...   922   0.0    1
(BJ436816) Dictyostelium discoideum cDNA clone:ddv32f12, 3' ...   922   0.0    1
(BJ436761) Dictyostelium discoideum cDNA clone:ddv32l04, 3' ...   922   0.0    1
(BJ437223) Dictyostelium discoideum cDNA clone:ddv33h14, 3' ...   914   0.0    1
(BJ437275) Dictyostelium discoideum cDNA clone:ddv33b21, 3' ...   569   0.0    2
(BJ441564) Dictyostelium discoideum cDNA clone:ddv47i03, 3' ...   569   0.0    2
(BJ437183) Dictyostelium discoideum cDNA clone:ddv33p09, 3' ...   569   0.0    2
(BJ443691) Dictyostelium discoideum cDNA clone:ddv53e20, 3' ...   569   0.0    2
(BJ438632) Dictyostelium discoideum cDNA clone:ddv38c05, 3' ...   563   0.0    2
(BJ443871) Dictyostelium discoideum cDNA clone:ddv54m08, 3' ...   882   0.0    1

Homology VHK275 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54N72) RecName: Full=Probable nucleolar GTP-binding protein 1;      187   2e-46
CP002219_1778(CP002219|pid:none) Caldicellulosiruptor hydrotherm...    34   3.8
CP001393_799(CP001393|pid:none) Caldicellulosiruptor bescii DSM ...    34   3.8
CP002330_1728(CP002330|pid:none) Caldicellulosiruptor kronotskye...    34   3.8
FP476056_3164(FP476056|pid:none) Zobellia galactanivorans strain...    34   5.0

Homology VHK275 vs Genome