Dictyostelium discoideum cDNA Clone VHJ647

Sequence VHJ647

CTGGTTGATC CTGCCAGTAG TCATATGCTT GTCTCAAAGA TTAAGCCATG
CATGTCTAAG TATAAATTCT TGTACGATGA AACTGCAGAC GGCTCATTAC
AACAGTGATA AACTAATAGA CTTTCGGGTT TTACCTTTTG GATAACCGCA
GTAAATCGGG GCTAATACAT ACAAGCGATG GGTGACTGGC AACGGAAGCT
CAGCGATTAT TAGCATTCTA CCAATGCCTT CGGGTTTTGG GTGATACCGA
ATAATATTGC AGATCGAGGA TTTATCTTCG ACAAGTCTAC TGTGTCACTG
CCCTATCAAC TTTCGATGGT ACGGTATTGG CCTACCATGG TTGTAACGGG
TAACGGGGAA TTAGGGTTCG ATTCCGGAGA GGGAGCCTGA GAAATGGCTA
CCACTTCTAC GGAAGGCAGC AGGCGCGCAA ATTACTCAAT CCCAATACGG
GGAAGTAGTG ACAATAAATA TCAATACCTA TCCTTTTTGG AGGGCAATTG
AAATGAACAC AAATTAAAAC TCTTAATTAA CACAATTGGA GGGCAAGTCT
GGTGCCAGCA GCCGCGGTAA TT-------- --GNAAAACT TACCAAGNTA
AGATATAGTA AGGATTGACA GACTAAAAGA TCTTTCATGA TTCTATAAGT
GGTGGTGCAT GGTCGTTCTT AGTTGGTGGA GCGATTTGTC TGGTCAATTC
CGATAACGGA CGAGACCTCG ACCCTGCTAA CTAGTAGTAT TTATTAGTCG
ATATAGACGA TAGCTTTTCT GGGGTTTGGA ATGATTTCGG TCATCTCCTG
CTTCAAGGAG TGTGTAGTCT GACTCGATAG GTACGAATTA AAACTTCTTA
GAGGGACTAC CTGCCTCAAG CAGGCGGAAG TCCGAGGCAA TAACAGGTCT
GTGATGCCCT TAGATACCTT GGGCCGCACG CGCGCTACAA TGTAGGAAAC
AAAAAGGCTC CTGGTCCGGA AGGATTGGGT AATCATTTGA ATTTCCTACG
TAACTGGGCT TGATCTTTGT AATTATTGAT CATAAACGAG GAATTCCTTG
TAAGCGTAAG TCATTACCTT ATGCTGAATA TGTCCCTGCC CTTTGTACAC
ACCGCCCGTC GCTCCTACCG ATCGAATGAT ACGGTAAAGT TAACGGATCG
TTTTATCTGT GGCAACACTG ATATAAATTA AAAGTTATTT AAATCTCATT
GTTTAGAGGA AGGAGAAGTC GTAACAAGGT ATCCGTAGGT GAACCTGCGG
ATGGATCATT TTTTATCTTA ATATCATAAA CTTTATGTTT TTTTGGATAA
TGGAACTGCT TGCGTATAAA GAAATTAGGC TTTTTAATTA AGGTTTAAGN
AGTAAGTGGN CTNGTCAGAT TTA

Translated Amino Acid Sequence VHJ647

wlilpvviclsqrlshaclsinsctmklqtahynsdklidfrvlpfg*pq*igantykrw
vtgngssaiisilpmpsgfg*yriilqiedlsstsllchcpinfrwygiglpwl*rvtgn
*gsiperepekwlpllrkaagaqitqsqygevvtinintypfwraiemntn*ns*LTQLE
GKSGASSRGN---

---XKLTKXRYSKD*qtkrsfmil*vvvhgrs*lverfvwsipitdetstlltssiy*si
*tiaflgfgmisviscfkecvv*ldryelkllrgttclkqaevrgnnrsvmpldtlgrtr
atm*etkrllvrkdwvii*isyvtgldlcny*s*trnsl*a*vitlc*icpcplytppva
ptdrmir*s*rivlsvatli*iksylnliv*rkeks*qgirr*tcgwiifylniinfmff
wimellaykeirlfn*glxskwxxqi

Homology VHJ647 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHJ647 (VHJ647Q) /CSM/VH/VHJ6-B/VHJ647Q.Seq.d/                       2591   0.0
VFM557 (VFM557Q) /CSM/VF/VFM5-C/VFM557Q.Seq.d/                       1481   0.0
AHO642 (AHO642Q) /CSM/AH/AHO6-B/AHO642Q.Seq.d/                       1471   0.0
VHA586 (VHA586Q) /CSM/VH/VHA5-D/VHA586Q.Seq.d/                       1431   0.0
FC-AG24 (FC-AG24Q) /CSM/FC/FC-AG/FC-AG24Q.Seq.d/                     1388   0.0
VHK334 (VHK334Q) /CSM/VH/VHK3-B/VHK334Q.Seq.d/                       1322   0.0
VHE244 (VHE244Q) /CSM/VH/VHE2-B/VHE244Q.Seq.d/                       1314   0.0
VHM640 (VHM640Q) /CSM/VH/VHM6-B/VHM640Q.Seq.d/                       1308   0.0
VFD795 (VFD795Q) /CSM/VF/VFD7-D/VFD795Q.Seq.d/                       1308   0.0
VHK855 (VHK855Q) /CSM/VH/VHK8-C/VHK855Q.Seq.d/                       1298   0.0

Homology VHJ647 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ442608) Dictyostelium discoideum cDNA clone:ddv50m12, 3' ...  1388   0.0    2
(AY171066) Dictyostelium discoideum extrachromosomal palindr...  1134   0.0    1
(AM168071) Dictyostelium discoideum 18S rRNA gene, isolate NC4.  1134   0.0    1
(AM168040) Dictyostelium discoideum 18S rRNA gene, isolate 9...  1134   0.0    1
(BJ423790) Dictyostelium discoideum cDNA clone:ddv50m12, 5' ...  1134   0.0    1
(BJ421651) Dictyostelium discoideum cDNA clone:ddv43k10, 5' ...  1134   0.0    1
(BJ420580) Dictyostelium discoideum cDNA clone:ddv39b21, 5' ...  1134   0.0    1
(BJ413027) Dictyostelium discoideum cDNA clone:ddv13k24, 5' ...  1134   0.0    1
(BJ390246) Dictyostelium discoideum cDNA clone:dds21o15, 5' ...  1134   0.0    1
(K02641) Slime mold (D.discoideum) 17S small subunit ribosom...  1126   0.0    1

Homology VHJ647 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF421549_1(AF421549|pid:none) Gallus gallus CDH1-D mRNA, partial...    69   6e-10
BT099075_1(BT099075|pid:none) Soybean clone JCVI-FLGm-16H4 unkno...    59   1e-08
JF284509_1(JF284509|pid:none) Cherax quadricarinatus clone v1-18...    64   3e-08
AM462492_6(AM462492|pid:none) Vitis vinifera contig VV78X177628....    60   2e-07
EU979522_1(EU979522|pid:none) Ornithoctonus huwena clone HWEco7 ...    59   8e-07
FN358262_1(FN358262|pid:none) Schistosoma mansoni genome sequenc...    49   2e-06
FN364425_1(FN364425|pid:none) Schistosoma mansoni genome sequenc...    48   5e-06
FP929128_287(FP929128|pid:none) Leptosphaeria maculans v23.1.3 l...    55   7e-06
FN365438_1(FN365438|pid:none) Schistosoma mansoni genome sequenc...    47   1e-05
FN364608_1(FN364608|pid:none) Schistosoma mansoni genome sequenc...    47   1e-05

Homology VHJ647 vs Genome