Homology VHI811 vs Protein

Query= VHI811 (VHI811Q) /CSM/VH/VHI8-A/VHI811Q.Seq.d/
         (924 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116330_42(AC116330|pid:none) Dictyostelium discoideum chromoso...    57   2e-06
AC116330_41(AC116330|pid:none) Dictyostelium discoideum chromoso...    51   8e-05
CP000712_1048(CP000712|pid:none) Pseudomonas putida F1, complete...    46   0.003
AE017226_1555(AE017226|pid:none) Treponema denticola ATCC 35405,...    35   7.5
AP012047_989(AP012047|pid:none) Arcobacter butzleri ED-1 DNA, co...    34   9.7

>AC116330_42(AC116330|pid:none) Dictyostelium discoideum chromosome
           2 map 3191214-3323468 strain AX4, complete sequence.
           &AC116330_44(AC116330|pid:none)
          Length = 235

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
 Frame = +3

Query: 255 KMKVPPDPLVFIKMPRSKLVWAWVKXXXXXXXXXXXXXXXPCAAYMRYIKSYPVVGTVEQ 434
           KM  P +P V I    S     ++K               PC + + + ++  +
Sbjct: 35  KMNNPIEPAVIINNQTSSSGTVFLKTDQYPNGADVKFNVKPCGSLVEFQQTLNITTPNYY 94

Query: 435 TMEKKKGFTSRFNASTEIKASASAGF--FGCEASLEVTTGFEYEETVTSETTHTWKQTLT 608
           T+ K   F+      +  K +   G+  F  EA  +    FEY     SET  ++ Q L+
Sbjct: 95  TISKSTSFSKHVQGDSNFK-NGHKGYIPFDFEAKFKFIRKFEYSADFYSETKTSYSQYLS 153

Query: 609 EGTYIVYQNVLVYAYTIVLSLNQTNTINQYNPGMNLRYIQQIDRAVMFVPINRDDPFTLR 788
             +Y V+Q+++ YAY ++ S++    + Q NP  + ++I   +    FV I  ++   +R
Sbjct: 154 TTSY-VHQSLVTYAYKMIDSIDH-RRLAQLNPDFDWKFIG--NDLYFFVSIYSNNQI-IR 208

Query: 789 YQDATWDPVEYDSLINYLVANPSKW 863
             D+ +  ++ +  INYL  + + W
Sbjct: 209 SYDSKYQMIDENDFINYLANHRNLW 233

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,438,906,215
Number of extensions: 48560874
Number of successful extensions: 119416
Number of sequences better than 10.0: 5
Number of HSP's gapped: 119376
Number of HSP's successfully gapped: 5
Length of query: 308
Length of database: 1,732,582,204
Length adjustment: 131
Effective length of query: 177
Effective length of database: 1,031,835,301
Effective search space: 182634848277
Effective search space used: 182634848277
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)