Homology VHI811 vs DNA
Query= VHI811 (VHI811Q) /CSM/VH/VHI8-A/VHI811Q.Seq.d/
(924 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ441848) Dictyostelium discoideum cDNA clone:ddv48f04, 3' ... 1400 0.0 2
(BJ446377) Dictyostelium discoideum cDNA clone:ddv62d14, 3' ... 1294 0.0 3
(BJ437106) Dictyostelium discoideum cDNA clone:ddv33p03, 3' ... 1294 0.0 3
(BJ432467) Dictyostelium discoideum cDNA clone:ddv18d19, 3' ... 1294 0.0 3
(BJ430721) Dictyostelium discoideum cDNA clone:ddv8p09, 3' e... 1245 0.0 2
(BJ434502) Dictyostelium discoideum cDNA clone:ddv24f05, 3' ... 1235 0.0 3
(BJ440343) Dictyostelium discoideum cDNA clone:ddv43k12, 3' ... 1221 0.0 2
(BJ438313) Dictyostelium discoideum cDNA clone:ddv37e15, 3' ... 1219 0.0 2
(BJ441291) Dictyostelium discoideum cDNA clone:ddv46c10, 3' ... 1166 0.0 2
(C83934) Dictyostelium discoideum slug cDNA, clone SSA683. 1156 0.0 4
(BJ428620) Dictyostelium discoideum cDNA clone:ddv12j14, 3' ... 1094 0.0 2
(BJ431824) Dictyostelium discoideum cDNA clone:ddv15p13, 3' ... 1088 0.0 5
(AU262120) Dictyostelium discoideum vegetative cDNA clone:VS... 1033 0.0 2
(BJ416094) Dictyostelium discoideum cDNA clone:ddv24o19, 5' ... 801 0.0 2
(BJ421653) Dictyostelium discoideum cDNA clone:ddv43k12, 5' ... 779 0.0 2
(BJ413409) Dictyostelium discoideum cDNA clone:ddv15o11, 5' ... 777 0.0 2
(BJ423099) Dictyostelium discoideum cDNA clone:ddv48f04, 5' ... 775 0.0 2
(X94341) D.discoideum mRNA for unknown protein with homology... 692 0.0 3
(AU076381) Dictyostelium discoideum slug cDNA, clone SSA683. 676 0.0 2
(BJ415886) Dictyostelium discoideum cDNA clone:ddv24f05, 5' ... 654 0.0 2
(BJ419888) Dictyostelium discoideum cDNA clone:ddv37e15, 5' ... 638 0.0 2
(BJ418099) Dictyostelium discoideum cDNA clone:ddv31l13, 5' ... 636 0.0 2
(BJ410456) Dictyostelium discoideum cDNA clone:ddv12j14, 5' ... 628 0.0 2
(BJ414325) Dictyostelium discoideum cDNA clone:ddv18d19, 5' ... 618 0.0 2
(BJ441742) Dictyostelium discoideum cDNA clone:ddv47o16, 3' ... 892 0.0 2
(BJ441740) Dictyostelium discoideum cDNA clone:ddv47o14, 3' ... 892 0.0 2
(BJ422989) Dictyostelium discoideum cDNA clone:ddv47o16, 5' ... 892 0.0 2
(BJ422987) Dictyostelium discoideum cDNA clone:ddv47o14, 5' ... 892 0.0 2
(BJ431758) Dictyostelium discoideum cDNA clone:ddv15o11, 3' ... 876 0.0 2
(BJ434776) Dictyostelium discoideum cDNA clone:ddv24o19, 3' ... 797 0.0 3
(BJ412437) Dictyostelium discoideum cDNA clone:ddv8p09, 5' e... 466 0.0 2
(BJ413478) Dictyostelium discoideum cDNA clone:ddv15p13, 5' ... 466 0.0 2
(AU272457) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 545 e-150 1
(AU272456) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 545 e-150 1
(AU271954) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 545 e-150 1
(AU271953) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 545 e-150 1
(AU271900) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 545 e-150 1
(AU271899) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 545 e-150 1
(AU271425) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 543 e-150 1
(AU272498) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 539 e-149 1
(AU272111) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 539 e-149 1
(AU271424) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 537 e-148 1
(BJ445201) Dictyostelium discoideum cDNA clone:ddv58c21, 3' ... 513 e-146 2
(AU272383) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 531 e-146 1
(BJ426376) Dictyostelium discoideum cDNA clone:ddv58c21, 5' ... 507 e-145 2
(AU272110) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 355 e-139 2
(AU271959) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 466 e-127 1
(AU272382) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 341 e-126 2
(AU073960) Dictyostelium discoideum slug cDNA, clone SSI876. 394 e-123 2
(AU272497) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 256 e-118 2
(BJ438339) Dictyostelium discoideum cDNA clone:ddv37j16, 3' ... 396 e-115 2
(BJ419913) Dictyostelium discoideum cDNA clone:ddv37j16, 5' ... 391 e-110 2
(BJ446356) Dictyostelium discoideum cDNA clone:ddv62o12, 3' ... 86 2e-53 6
(BJ437057) Dictyostelium discoideum cDNA clone:ddv33f02, 3' ... 86 2e-53 6
(U48706) Dictyostelium discoideum small aggregate formation ... 86 2e-51 6
(BJ431991) Dictyostelium discoideum cDNA clone:ddv17c11, 3' ... 86 2e-48 6
(C90354) Dictyostelium discoideum slug cDNA, clone SSI291. 86 8e-46 7
(BJ418564) Dictyostelium discoideum cDNA clone:ddv33p03, 5' ... 196 1e-45 1
(BJ432381) Dictyostelium discoideum cDNA clone:ddv18d15, 3' ... 86 3e-43 6
(BJ436350) Dictyostelium discoideum cDNA clone:ddv30k24, 3' ... 74 5e-43 6
(BJ433068) Dictyostelium discoideum cDNA clone:ddv20n15, 3' ... 86 3e-42 6
(AU271960) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 180 6e-41 1
(AU270379) Dictyostelium discoideum vegetative cDNA clone:VS... 86 6e-40 5
(AU262794) Dictyostelium discoideum vegetative cDNA clone:VS... 86 6e-40 5
(AU271094) Dictyostelium discoideum vegetative cDNA clone:VS... 86 7e-40 5
(AU264944) Dictyostelium discoideum vegetative cDNA clone:VS... 86 8e-40 5
(AU264210) Dictyostelium discoideum vegetative cDNA clone:VS... 86 8e-40 5
(BJ442379) Dictyostelium discoideum cDNA clone:ddv49n16, 3' ... 86 8e-40 5
(AU261620) Dictyostelium discoideum vegetative cDNA clone:VS... 86 8e-40 5
(BJ430140) Dictyostelium discoideum cDNA clone:ddv6p03, 3' e... 86 1e-39 5
(C90264) Dictyostelium discoideum slug cDNA, clone SSI515. 86 1e-39 5
(AU269152) Dictyostelium discoideum vegetative cDNA clone:VS... 86 3e-39 5
(AU269151) Dictyostelium discoideum vegetative cDNA clone:VS... 52 2e-35 6
(AU271093) Dictyostelium discoideum vegetative cDNA clone:VS... 68 4e-35 5
(BJ413879) Dictyostelium discoideum cDNA clone:ddv17c11, 5' ... 68 5e-35 5
(C91394) Dictyostelium discoideum slug cDNA, clone SSK163. 86 2e-32 5
(BJ429985) Dictyostelium discoideum cDNA clone:ddv5k18, 3' e... 86 7e-31 4
(AU268260) Dictyostelium discoideum vegetative cDNA clone:VS... 86 8e-31 4
(AU270481) Dictyostelium discoideum vegetative cDNA clone:VS... 86 9e-31 4
(AU263169) Dictyostelium discoideum vegetative cDNA clone:VS... 86 1e-30 4
(C92737) Dictyostelium discoideum slug cDNA, clone SSF175. 86 1e-30 4
(C90480) Dictyostelium discoideum slug cDNA, clone SSI586. 86 1e-30 4
(AU268477) Dictyostelium discoideum vegetative cDNA clone:VS... 86 2e-28 4
(AU261868) Dictyostelium discoideum vegetative cDNA clone:VS... 86 6e-27 3
(AU038088) Dictyostelium discoideum slug cDNA, clone SSH256. 86 6e-27 3
(AU262409) Dictyostelium discoideum vegetative cDNA clone:VS... 86 7e-27 3
(AU265313) Dictyostelium discoideum vegetative cDNA clone:VS... 86 7e-26 3
(AU262207) Dictyostelium discoideum vegetative cDNA clone:VS... 86 3e-23 3
(AU262809) Dictyostelium discoideum vegetative cDNA clone:VS... 86 2e-22 3
(AU264209) Dictyostelium discoideum vegetative cDNA clone:VS... 68 3e-22 4
(BJ411890) Dictyostelium discoideum cDNA clone:ddv6p03, 5' e... 68 4e-22 4
(AU262540) Dictyostelium discoideum vegetative cDNA clone:VS... 86 4e-20 3
(BJ414247) Dictyostelium discoideum cDNA clone:ddv18d15, 5' ... 70 2e-19 3
(AU264943) Dictyostelium discoideum vegetative cDNA clone:VS... 68 5e-19 3
(AU268476) Dictyostelium discoideum vegetative cDNA clone:VS... 68 6e-19 3
(AU270378) Dictyostelium discoideum vegetative cDNA clone:VS... 68 7e-19 3
(AU265312) Dictyostelium discoideum vegetative cDNA clone:VS... 68 7e-19 3
(AU268259) Dictyostelium discoideum vegetative cDNA clone:VS... 68 8e-19 3
(BJ414867) Dictyostelium discoideum cDNA clone:ddv20n15, 5' ... 68 8e-19 3
(AU264571) Dictyostelium discoideum vegetative cDNA clone:VS... 86 1e-18 2
>(BJ441848) Dictyostelium discoideum cDNA clone:ddv48f04, 3' end,
single read.
Length = 745
Score = 1400 bits (706), Expect(2) = 0.0
Identities = 709/709 (100%)
Strand = Plus / Minus
Query: 180 ataatccaaaaaacgtatttaatttggaccaagctcaaactgctaataccaatttttgcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ataatccaaaaaacgtatttaatttggaccaagctcaaactgctaataccaatttttgcc 686
Query: 240 attgatcgtcatattaaaatgaaagttccaccagatccattggtttttattaaaatgcct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 attgatcgtcatattaaaatgaaagttccaccagatccattggtttttattaaaatgcct 626
Query: 300 cgatcaaaattagtttgggcatgggtgaagatctctacaggtagttcaactactagttta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cgatcaaaattagtttgggcatgggtgaagatctctacaggtagttcaactactagttta 566
Query: 360 ataggcagttttactccttgtgctgcatatatgagatacattaaatcatatccagttgtt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ataggcagttttactccttgtgctgcatatatgagatacattaaatcatatccagttgtt 506
Query: 420 ggtaccgttgaacaaactatggaaaagaaaaaaggctttacttcaagatttaatgccagt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggtaccgttgaacaaactatggaaaagaaaaaaggctttacttcaagatttaatgccagt 446
Query: 480 actgaaattaaggcaagtgcatcagcagggttctttggttgtgaagcatcactcgaagtg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actgaaattaaggcaagtgcatcagcagggttctttggttgtgaagcatcactcgaagtg 386
Query: 540 accactggtttcgaatatgaagaaactgttacatcagagacaactcacacatggaaacaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 accactggtttcgaatatgaagaaactgttacatcagagacaactcacacatggaaacaa 326
Query: 600 actctcactgagggaacttatattgtttatcaaaatgttcttgtttatgcatatacaata 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actctcactgagggaacttatattgtttatcaaaatgttcttgtttatgcatatacaata 266
Query: 660 gtattatcactaaatcaaactaatactataaatcaatataacccaggtatgaatttgaga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtattatcactaaatcaaactaatactataaatcaatataacccaggtatgaatttgaga 206
Query: 720 tatatccaacaaatagatcgtgctgttatgtttgtaccaatcaatcgtgatgatccattc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tatatccaacaaatagatcgtgctgttatgtttgtaccaatcaatcgtgatgatccattc 146
Query: 780 actcttcgttatcaagatgccacatgggatccagtggagtatgattcattaattaactat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 actcttcgttatcaagatgccacatgggatccagtggagtatgattcattaattaactat 86
Query: 840 ttggttgcaaatccaagtaaatggagatctnattcataaagaaataacc 888
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ttggttgcaaatccaagtaaatggagatctnattcataaagaaataacc 37
Score = 52.0 bits (26), Expect(2) = 0.0
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 896 ggttttaaataataaaatcanatttttat 924
|||||||||||||||||||||||||||||
Sbjct: 29 ggttttaaataataaaatcanatttttat 1
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,187,248,358
Number of extensions: 77422503
Number of successful extensions: 6280154
Number of sequences better than 10.0: 178
Length of query: 924
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 900
Effective length of database: 97,308,875,965
Effective search space: 87577988368500
Effective search space used: 87577988368500
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home