Homology VHI774 vs Protein

Query= VHI774 (VHI774Q) /CSM/VH/VHI7-D/VHI774Q.Seq.d/
         (1310 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54B29) RecName: Full=Uncharacterized membrane protein DDB_G029...   209   4e-52
BC154574_1(BC154574|pid:none) Danio rerio zgc:172183, mRNA (cDNA...    51   1e-04
AK144411_1(AK144411|pid:none) Mus musculus adult male intestinal...    49   5e-04
AK141695_1(AK141695|pid:none) Mus musculus 9 days embryo whole b...    47   0.002
AK039649_1(AK039649|pid:none) Mus musculus adult male spinal cor...    47   0.002
BC148934_1(BC148934|pid:none) Bos taurus hypothetical protein LO...    47   0.002
BC157942_1(BC157942|pid:none) Mus musculus gene model 98, (NCBI)...    47   0.002
AF038536_1(AF038536|pid:none) Homo sapiens Best's macular dystro...    47   0.003
AB023171_1(AB023171|pid:none) Homo sapiens mRNA for KIAA0954 pro...    47   0.003
(Q9Y2G1) RecName: Full=Myelin gene regulatory factor;  &AB385408...    47   0.003
AF086762_1(AF086762|pid:none) Homo sapiens C11orf9 mRNA, complet...    47   0.003
(Q66IV1) RecName: Full=Myelin gene regulatory factor;  &BC081179...    45   0.007
AE013599_4347(AE013599|pid:none) Drosophila melanogaster chromos...    45   0.009
CP002542_1819(CP002542|pid:none) Fluviicola taffensis DSM 16823,...    41   0.13
HM004429_73(HM004429|pid:none) Micromonas sp. RCC1109 virus MpV1...    40   0.39
AL021567_4(AL021567|pid:none) Caenorhabditis elegans Cosmid F21A...    39   0.87
BX842653_51(BX842653|pid:none) Bdellovibrio bacteriovorus comple...    39   0.87
AL021567_6(AL021567|pid:none) Caenorhabditis elegans Cosmid F21A...    39   0.87
AL021567_7(AL021567|pid:none) Caenorhabditis elegans Cosmid F21A...    39   0.87
CP000319_3651(CP000319|pid:none) Nitrobacter hamburgensis X14, c...    39   0.87
GU071098_232(GU071098|pid:none) Synechococcus phage S-SSM7, comp...    38   1.1
CP002542_1877(CP002542|pid:none) Fluviicola taffensis DSM 16823,...    36   4.3

>(Q54B29) RecName: Full=Uncharacterized membrane protein DDB_G0293934;
          Length = 1713

 Score =  209 bits (531), Expect = 4e-52
 Identities = 111/162 (68%), Positives = 111/162 (68%)
 Frame = +1

Query: 151  IQQSLFLNQNIPGVSTNQMINSLNLANGLLQNTTTPQSHHTILEXXXXXXXXXXXXXXXX 330
            IQQSLFLNQNIPGVSTNQMINSLNLANGLLQNTTTPQSHHTILE
Sbjct: 1095 IQQSLFLNQNIPGVSTNQMINSLNLANGLLQNTTTPQSHHTILEINNNHHHHQQQQQQPI 1154

Query: 331  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNKFAKWNTNPFMEEVIYTNNKVG 510
                                               RKNKFAKWNTNPFMEEVIYTNNKVG
Sbjct: 1155 TTTTTTTTTIPSTPQPSQQSMTNSGGSSSTNSSISRKNKFAKWNTNPFMEEVIYTNNKVG 1214

Query: 511  INTTTPTQALAVNGNILVTGELFKPSDQRIKSNIRLDNTDHW 636
            INTTTPTQALAVNGNILVTGELFKPSDQRIKSNIRLDNTDHW
Sbjct: 1215 INTTTPTQALAVNGNILVTGELFKPSDQRIKSNIRLDNTDHW 1256

 Score =  171 bits (432), Expect = 1e-40
 Identities = 102/206 (49%), Positives = 102/206 (49%)
 Frame = +3

Query: 648  RERIKLMQADGYKNLADHVSSFRVDYNQHQAKANNNMLXXXXXRIQMEKLNSQRNYGGIN 827
            RERIKLMQADGYKNLADHVSSFRVDYNQHQAKANNNML     RIQMEKLNSQRNYGGIN
Sbjct: 1505 RERIKLMQADGYKNLADHVSSFRVDYNQHQAKANNNMLKKKKKRIQMEKLNSQRNYGGIN 1564

Query: 828  TTDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQERLXXXXXXXXXXXXXXX 1007
            TTDK                                     QERL
Sbjct: 1565 TTDKINNSNINNIGINNPNNIQNNQINNILNNSNNNINNNNQERLSDSSKSSFIDDFKKS 1624

Query: 1008 XXNNHKDFHEIPLQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1187
              NNHKDFHEIPLQE
Sbjct: 1625 SSNNHKDFHEIPLQEIIQSIGIKGKKQSSSSAKTRSLSSSNLVNSVNSNLVNSTNSNNTS 1684

Query: 1188 ILLKSHNSNSPLFNSTPTPTNVVFNS 1265
            ILLKSHNSNSPLFNSTPTPTNVVFNS
Sbjct: 1685 ILLKSHNSNSPLFNSTPTPTNVVFNS 1710

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,871,610,618
Number of extensions: 23414337
Number of successful extensions: 43874
Number of sequences better than 10.0: 22
Number of HSP's gapped: 43814
Number of HSP's successfully gapped: 25
Length of query: 436
Length of database: 1,732,582,204
Length adjustment: 135
Effective length of query: 301
Effective length of database: 1,010,438,449
Effective search space: 304141973149
Effective search space used: 304141973149
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)