Dictyostelium discoideum cDNA Clone VHI774

Sequence VHI774

CAACAACAAC AATTATCAAA TTTAAAAGCA GCTCAAGCAG CTGCTGCAAT
CGCTGCTTCA ATAGCAAATA CCACTTCAAC ACCAAATACC ACTTCAACAG
ATATTCAAAA TCCATTCAAC TTTTTAAATA ATCCTTTAAC AAATACAAAT
ATTCAACAAA GTTTATTTCT TAATCAAAAT ATACCCGGTG TATCAACTAA
TCAAATGATT AATAGTTTAA ACCTTGCTAA TGGATTATTA CAAAATACAA
CAACTCCACA ATCTCACCAT ACAATTTTAG AAATTAATAA TAATCATCAT
CATCATCAAC AACAACAACA ACAACCAATA ACTACAACCA CTACAACCAC
TACAACAATA CCATCAACTC CACAACCATC TCAACAATCT ATGACAAATA
GTGGTGGTAG TAGTAGTACT AATAGTTCAA TTAGTAGAAA AAATAAATTT
GCAAAATGGA ATACCAATCC ATTTATGGAA GAAGTTATTT ATACCAATAA
TAAAGTTGGT ATTAATACAA CTACACCAAC TCAAGCACTC GCTGTAAATG
GTAATATTTT AGTAACTGGT GAATTATTTA AACCATCAGA TCAAAGAATT
AAATCAAATA TTCGTCTTGA TAATACTGAT CATTGG---- ------CCGT
GAAAGAATTA AGTTAATGCA AGCTGATGGT TATAAAAATT TGGCTGACCA
TGTTAGTAGC TTTAGAGTTG ATTACAACCA ACATCAAGCA AAAGCAAATA
ATAATATGTT AAAGAAAAAG AAAAAGAGAA TTCAAATGGA AAAATTAAAT
TCACAAAGAA ATTATGGTGG TATTAACACA ACTGATAAAA TAAATAATTC
AAATATTAAT AATATTGGTA TAAATAATCC AAATAATATT CAAAATAATC
AAATTAATAA TATATTAAAT AATAGTAATA ATAATATTAA TAATAATAAT
CAAGAAAGAT TAAGTGACTC AAGTAAATCC TCATTTATTG ATGACTTTAA
AAAATCATCA AGTAATAATC ATAAGGATTT CCATGAAATT CCACTTCAAG
AGATCATTCA AAGTATTGGT ATTAAGGGTA AAAAACAATC ATCATCATCT
GCCAAAACAA GATCACTCTN TTCATCAAAC TTGGTTAACT CTGTAAATTC
AAATTTAGTA AATAGCACAA ACTCAAATAA TACATCAATC TTATTAAAAT
CTCATAATTC AAATAGTCCT TTATTTAATT CAACTCCAAC TCCAACTAAT
GTTGTATTTA ATTCAATNAA GTTTAAAGAT NAAAGAAAAN AAAAAAATAA
AAAAAAAATA

Translated Amino Acid Sequence VHI774

QQQQLSNLKAAQAAAAIAASIANTTSTPNTTSTDIQNPFNFLNNPLTNTNIQQSLFLNQN
IPGVSTNQMINSLNLANGLLQNTTTPQSHHTILEINNNHHHHQQQQQQPITTTTTTTTTI
PSTPQPSQQSMTNSGGSSSTNSSISRKNKFAKWNTNPFMEEVIYTNNKVGINTTTPTQAL
AVNGNILVTGELFKPSDQRIKSNIRLDNTDHW---

---RERIKLMQADGYKNLADHVSSFRVDYNQHQAKANNNMLKKKKKRIQMEKLNSQRNYG
GINTTDKINNSNINNIGINNPNNIQNNQINNILNNSNNNINNNNQERLSDSSKSSFIDDF
KKSSSNNHKDFHEIPLQEIIQSIGIKGKKQSSSSAKTRSLXSSNLVNSVNSNLVNSTNSN
NTSILLKSHNSNSPLFNSTPTPTNVVFNSXKFKDXRKXKNKKKI

Homology VHI774 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHI774 (VHI774Q) /CSM/VH/VHI7-D/VHI774Q.Seq.d/                        718   0.0
VHQ172 (VHQ172Q) /CSM/VH/VHQ1-C/VHQ172Q.Seq.d/                        640   0.0
AHN423 (AHN423Q) /CSM/AH/AHN4-A/AHN423Q.Seq.d/                        638   0.0
VHE577 (VHE577Q) /CSM/VH/VHE5-D/VHE577Q.Seq.d/                        624   e-178
SSA348 (SSA348Q) /CSM/SS/SSA3-B/SSA348Q.Seq.d/                        622   e-177
SSG130 (SSG130Q) /CSM/SS/SSG1-B/SSG130Q.Seq.d/                        615   e-175
SLA584 (SLA584Q) /CSM/SL/SLA5-D/SLA584Q.Seq.d/                        609   e-173
CHG654 (CHG654Q) /CSM/CH/CHG6-C/CHG654Q.Seq.d/                        593   e-168
SFC584 (SFC584Q) /CSM/SF/SFC5-D/SFC584Q.Seq.d/                        573   e-162
SSL489 (SSL489Q) /CSM/SS/SSL4-D/SSL489Q.Seq.d/                         48   3e-04

Homology VHI774 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ423312) Dictyostelium discoideum cDNA clone:ddv48d19, 5' ...   607   0.0    2
(BJ442076) Dictyostelium discoideum cDNA clone:ddv48d19, 3' ...   646   0.0    3
(BJ446742) Dictyostelium discoideum cDNA clone:ddv63o17, 3' ...   640   0.0    3
(BJ355468) Dictyostelium discoideum cDNA clone:dda57n06, 3' ...   638   0.0    3
(BJ439559) Dictyostelium discoideum cDNA clone:ddv40i19, 3' ...   624   0.0    3
(BJ337372) Dictyostelium discoideum cDNA clone:dda57n06, 5' ...   607   0.0    2
(AU036983) Dictyostelium discoideum slug cDNA, clone SSA348.      622   e-174  1
(C83957) Dictyostelium discoideum slug cDNA, clone SLA584.        609   e-169  1
(BJ420919) Dictyostelium discoideum cDNA clone:ddv40i19, 5' ...   607   e-169  1
(BJ379678) Dictyostelium discoideum cDNA clone:ddc35k14, 3' ...   595   e-165  1

Homology VHI774 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54B29) RecName: Full=Uncharacterized membrane protein DDB_G029...   209   4e-52
BC154574_1(BC154574|pid:none) Danio rerio zgc:172183, mRNA (cDNA...    51   1e-04
AK144411_1(AK144411|pid:none) Mus musculus adult male intestinal...    49   5e-04
AK141695_1(AK141695|pid:none) Mus musculus 9 days embryo whole b...    47   0.002
AK039649_1(AK039649|pid:none) Mus musculus adult male spinal cor...    47   0.002
BC148934_1(BC148934|pid:none) Bos taurus hypothetical protein LO...    47   0.002
BC157942_1(BC157942|pid:none) Mus musculus gene model 98, (NCBI)...    47   0.002
AF038536_1(AF038536|pid:none) Homo sapiens Best's macular dystro...    47   0.003
AB023171_1(AB023171|pid:none) Homo sapiens mRNA for KIAA0954 pro...    47   0.003
(Q9Y2G1) RecName: Full=Myelin gene regulatory factor;  &AB385408...    47   0.003

Homology VHI774 vs Genome