Dictyostelium discoideum cDNA Clone VHH817

Sequence VHH817

CTTTCAAATA CATGGCAAGA AATCGATAGT CTTAAAGAGA CTGCTTGGTC
TGCTATCATT CCAAGAAAAG TTAGAAAATC ATTGGAAGAT ACTTTACAAA
AATTGAAAAA TTTACCAAAT CGTATTCGTC AATACTCTGC CTTTGATCAT
GCTCAAAACT TAATTAAAAT CTATCTCAAA GGTAATGCAA TCATCACCGA
TCTTCACTCT GAAGCCATCA AAGATCGTCA TTGGAAAATT TTAAAGAAAC
GTTTAAATAC CAATTGGATC ATTACAGAGT TAACATTGGG TTCCATTTGG
GATTCAGATT TAGCAAGAAA TGAAAATATC TATCGTGAGG TTATCACTGC
AGCTCAAGGT GAAATTGCTT TAGAGGAATT CCTTAAAGGT GTTAGAGAAT
TTTGGACAAC TCTCGAATTG GATCTCGTTA ACTATCAACG TAAATGTAAA
TTGGTACGTG GTTGGGATGA TTTATTCAAC AAATTGGCAG AACATTTGAA
TTCAATTTCC GCTATGAAAA TGTCACCATA CTATAAGGTT TTCGAAGAGG
AAGCAAATCA TTGGGATGAT AGATTAAATA AGGTTAGATC ATTATTGGAT
GTTTGGATCG ATGTTCAAAG ACGTTGGGTC TA-------- --ATCTATTG
TCAATATGAA ATTGGTGTGT TATTAAACTC TATCAATGAT ACCATGATTC
CAAAATTGGT TGCTGACGAT ATTCCATTGA TTCAATCATT GTTATTGGAT
GTTTTCCCAG GTTCACAATT ACAACCAATT CAAATGGATC AATTACGTAA
AAAGATTCAA GAAATTGCCA AACAAAGACA TTTGGTTACC AAACAAGAAT
GGGTTGAAAA GATCCTTCAA TTACATCAAA TTCTCAATAT CAATCATGGT
GTTATGATGG TTGGTCCATC TGGTGGTGGT AAAACTACAA GTTGGGAGGT
TTATTTAGAA GCCATCGAAC AAGTTGATAA CATTAAATCC GAAGCTCATG
TTATGGATCC AAAAGCTATC ACCAAAGATC AATTATTTGG TTCATTGGAT
TTAACAACTC GTGAATGGAC CGATGGTTTA TTCACTGCAA CCCTTCGTCG
TATCATTGAT AATGTTCGTG GTGAATCCAC TAAACGTCAT TGGATCATTT
TCGATGGTGA TGTTGATCCA GAATGGGTAG AAAATTTGAA CTCTCTCTTG
GATGATAATA AATTATTAAC ACTTCCAAAT GGTGAACGTT TAGCACTTCC
AAATAATGTT AGAGTTACGT TTGAAGTACA AGATCTTAAA TATGCAACAC
TCGCTACCAT TTCACGTTGT GGTATGGTTT GGTTTAGTGA AGAGATTTTA
ACAACTCAAA NATTTTCCAA AATTATTTAG ATACTCTTTC AAANAACCAT
TNATCCACAA AAAAAGA

Translated Amino Acid Sequence VHH817

LSNTWQEIDSLKETAWSAIIPRKVRKSLEDTLQKLKNLPNRIRQYSAFDHAQNLIKIYLK
GNAIITDLHSEAIKDRHWKILKKRLNTNWIITELTLGSIWDSDLARNENIYREVITAAQG
EIALEEFLKGVREFWTTLELDLVNYQRKCKLVRGWDDLFNKLAEHLNSISAMKMSPYYKV
FEEEANHWDDRLNKVRSLLDVWIDVQRRWV---

---IYCQYEIGVLLNSINDTMIPKLVADDIPLIQSLLLDVFPGSQLQPIQMDQLRKKIQE
IAKQRHLVTKQEWVEKILQLHQILNINHGVMMVGPSGGGKTTSWEVYLEAIEQVDNIKSE
AHVMDPKAITKDQLFGSLDLTTREWTDGLFTATLRRIIDNVRGESTKRHWIIFDGDVDPE
WVENLNSLLDDNKLLTLPNGERLALPNNVRVTFEVQDLKYATLATISRCGMVWFSEEILT
TQXFSKII*ilfqxtixpqkk

Homology VHH817 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHH817 (VHH817Q) /CSM/VH/VHH8-A/VHH817Q.Seq.d/                       2714   0.0
VHC372 (VHC372Q) /CSM/VH/VHC3-C/VHC372Q.Seq.d/                       1489   0.0
CHR321 (CHR321Q) /CSM/CH/CHR3-A/CHR321Q.Seq.d/                       1465   0.0
VFJ339 (VFJ339Q) /CSM/VF/VFJ3-B/VFJ339Q.Seq.d/                         42   0.023
VFH771 (VFH771Q) /CSM/VF/VFH7-C/VFH771Q.Seq.d/                         42   0.023
CHL690 (CHL690Q) /CSM/CH/CHL6-D/CHL690Q.Seq.d/                         42   0.023
VHH193 (VHH193Q) /CSM/VH/VHH1-D/VHH193Q.Seq.d/                         40   0.091
VSK122 (VSK122Q) /CSM/VS/VSK1-A/VSK122Q.Seq.d/                         38   0.36
VHQ277 (VHQ277Q) /CSM/VH/VHQ2-D/VHQ277Q.Seq.d/                         38   0.36
VHP634 (VHP634Q) /CSM/VH/VHP6-B/VHP634Q.Seq.d/                         38   0.36

Homology VHH817 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ441208) Dictyostelium discoideum cDNA clone:ddv46b06, 3' ...  1501   0.0    1
(BJ437898) Dictyostelium discoideum cDNA clone:ddv35p17, 3' ...  1489   0.0    1
(BJ385781) Dictyostelium discoideum cDNA clone:ddc56j05, 3' ...  1465   0.0    1
(Z15124) D.discoideum mRNA for cytoplasmic dynein heavy chain.   1415   0.0    2
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595...  1415   0.0    2
(BJ422466) Dictyostelium discoideum cDNA clone:ddv46b06, 5' ...  1253   0.0    1
(BJ370965) Dictyostelium discoideum cDNA clone:ddc56j05, 5' ...   262   3e-65  1
(BJ419316) Dictyostelium discoideum cDNA clone:ddv35p17, 5' ...   246   2e-60  1
(AC090003) Caenorhabditis briggsae cosmid G45N09, complete s...   100   2e-25  6
(FE347322) CBIB7147.fwd CBIB_Daphnia_pulex_Chosen_One_Librar...    84   2e-22  4

Homology VHH817 vs Protein

Sequences producing significant alignments:                      (bits) Value


A44357(A44357;S28504) dynein heavy chain, cytosolic - slime mold...   447   e-124
BC154077_1(BC154077|pid:none) Xenopus tropicalis dynein, cytopla...   293   2e-77
L08505_1(L08505|pid:none) Rattus norvegicus cytoplasmic dynein h...   292   3e-77
AY004877_1(AY004877|pid:none) Mus musculus cytoplasmic dynein he...   292   4e-77
(Q14204) RecName: Full=Cytoplasmic dynein 1 heavy chain 1; AltNa...   290   1e-76
G02529(G02529) dynein heavy chain 1, cytosolic - human (fragment...   290   1e-76
DQ323903_1(DQ323903|pid:none) Danio rerio dynein cytoplasmic 1 h...   289   2e-76
AF403739_1(AF403739|pid:none) Ustilago maydis cytoplasmic dynein...   285   6e-75
EF178475_1(EF178475|pid:none) Sus scrofa dynein cytoplasmic heav...   283   1e-74
AF346733_1(AF346733|pid:none) Tetrahymena thermophila cytoplasmi...   279   2e-73

Homology VHH817 vs Genome