Homology VHH817 vs DNA
Query= VHH817 (VHH817Q) /CSM/VH/VHH8-A/VHH817Q.Seq.d/
(1417 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ441208) Dictyostelium discoideum cDNA clone:ddv46b06, 3' ... 1501 0.0 1
(BJ437898) Dictyostelium discoideum cDNA clone:ddv35p17, 3' ... 1489 0.0 1
(BJ385781) Dictyostelium discoideum cDNA clone:ddc56j05, 3' ... 1465 0.0 1
(Z15124) D.discoideum mRNA for cytoplasmic dynein heavy chain. 1415 0.0 2
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 1415 0.0 2
(BJ422466) Dictyostelium discoideum cDNA clone:ddv46b06, 5' ... 1253 0.0 1
(BJ370965) Dictyostelium discoideum cDNA clone:ddc56j05, 5' ... 262 3e-65 1
(BJ419316) Dictyostelium discoideum cDNA clone:ddv35p17, 5' ... 246 2e-60 1
(AC090003) Caenorhabditis briggsae cosmid G45N09, complete s... 100 2e-25 6
(FE347322) CBIB7147.fwd CBIB_Daphnia_pulex_Chosen_One_Librar... 84 2e-22 4
(FE347321) CBIB7147.rev CBIB_Daphnia_pulex_Chosen_One_Librar... 84 2e-22 4
(CD091641) MC1-0089G-A153-D02-U.G MC1-0089 Schistosoma manso... 60 3e-20 3
(CD091631) MC1-0089G-A153-A04-U.G MC1-0089 Schistosoma manso... 60 5e-20 3
(AQ856059) CpG1508B CpIOWAgDNA1 Cryptosporidium parvum genom... 96 4e-15 1
(DN814794) ACAC-aac42c24.g1 Hydra EST UCI 7 Hydra magnipapil... 62 3e-14 3
(U80440) Caenorhabditis elegans cosmid T21E12, complete sequ... 54 5e-14 3
(L33260) Caenorhabditis elegans dynein heavy chain gene exon... 54 5e-14 3
(Z21941) T.gratilla dynein heavy chain isotype 1A (DYH1A). 84 7e-14 2
(AL844506) Plasmodium falciparum chromosome 7. 56 1e-13 2
(CQ612351) Sequence 40109 from Patent WO0171042. 60 8e-13 4
(CQ612350) Sequence 40108 from Patent WO0171042. 60 2e-12 4
(AF025312) Tetrahymena thermophila cytoplasmic dynein heavy ... 50 2e-11 4
(AF346733) Tetrahymena thermophila cytoplasmic dynein 1 (DYH... 50 5e-11 5
(AC014970) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 60 8e-11 4
(CR382138) Debaryomyces hansenii chromosome F of strain CBS7... 68 8e-11 2
(EC437603) 165426444 Sea Urchin Radial Nerve cDNA Library St... 62 9e-11 2
(AM667981) Entamoeba terrapinae GSS, clone terra135e03.p1k. 68 9e-11 2
(CD091617) MC1-0089G-A152-F07-U.B MC1-0089 Schistosoma manso... 58 9e-11 2
(CD091626) MC1-0089G-A152-H03-U.B MC1-0089 Schistosoma manso... 58 9e-11 2
(EL908854) INIT2_27_E09.g1_A006 G5 trophont cDNA (INIT2) Ich... 56 6e-10 3
(AC023751) Drosophila melanogaster 3L BAC RP98-31C17 (Roswel... 60 9e-10 4
(CO015062) EST785444 Coccidioides posadasii saprobic phase c... 48 2e-09 4
(EY598573) CAWU466.fwd CAWU Capitella sp. I ECS-2004 Primary... 52 8e-09 3
(AB086833) Aspergillus oryzae dhcA gene for cytoplasmic dyne... 54 1e-08 3
(BU390134) 603803885F1 CSEQCHN57 Gallus gallus cDNA clone Ch... 46 3e-08 3
(CO016629) EST787011 Coccidioides posadasii saprobic phase c... 48 6e-07 4
(AM910984) Plasmodium knowlesi strain H chromosome 2, comple... 52 9e-07 2
(CV548113) 1742BEX47B3 BgORESTES infected NHM 1742 Brain Bio... 42 2e-04 2
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 60 2e-04 1
(AC108877) Drosophila melanogaster 3L BAC RP98-17L24 (Roswel... 60 2e-04 1
(EB348611) CNSN01-F-089333-501 Normalized CNS library (juven... 58 0.001 1
(EB292231) CNSN01-F-041324-501 Normalized CNS library (juven... 58 0.001 1
(L23195) Drosophila melanogaster cytoplasmic dynein heavy ch... 46 0.006 2
(AP007166) Aspergillus oryzae RIB40 genomic DNA, SC113. 54 0.015 1
(CG812308) FSAAN47TR LargeInsertGenomicLibrary Fusarium virg... 50 0.023 2
(CG812415) FSAAV35TR LargeInsertGenomicLibrary Fusarium virg... 52 0.059 1
(CG811926) FSAAS96TR LargeInsertGenomicLibrary Fusarium virg... 52 0.059 1
(DQ395127) Tetrahymena thermophila dynein heavy chain 19 gen... 48 0.078 2
(CR382131) Yarrowia lipolytica chromosome E of strain CLIB 1... 50 0.23 1
(EF621569) Tetrahymena thermophila dynein heavy chain 6 gene... 50 0.23 1
(AF153268) Tetrahymena thermophila dynein heavy chain (DYH6)... 50 0.23 1
(CJ443521) Macaca fascicularis mRNA, clone: QccE-21081, 5' e... 50 0.23 1
(AE014133) Streptococcus mutans UA159, complete genome. 48 0.92 1
(AB027295) Physarum polycephalum mitochondrial DNA, complete... 42 3.1 4
(AL928850) Mouse DNA sequence from clone RP23-260B13 on chro... 46 3.6 1
(CU633899) Podospora anserina genomic DNA chromosome 1, supe... 46 3.6 1
(AX926711) Sequence 1 from Patent WO03084989. 46 3.6 1
(AC152224) Bos taurus clone CH240-6I10, WORKING DRAFT SEQUEN... 46 3.6 1
(AC133747) Rattus norvegicus clone CH230-105L5, *** SEQUENCI... 46 3.6 1
(AC119309) Rattus norvegicus clone CH230-180D24, WORKING DRA... 46 3.6 1
(AC119134) Rattus norvegicus clone CH230-423E5, *** SEQUENCI... 46 3.6 1
(AC111053) Mus musculus clone RP24-464N22, WORKING DRAFT SEQ... 46 3.6 1
(AC103568) Rattus norvegicus clone CH230-2N15, WORKING DRAFT... 46 3.6 1
(AC224396) Bos taurus clone CH240-485P6, WORKING DRAFT SEQUE... 46 3.6 1
(ET489463) fcg2x.pk048.e3.f C. graminicola genomic sequence ... 46 3.6 1
(EK326041) 1095467007409 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.6 1
(CU883176) Podospora anserina mRNA sequence from clone HH0AB... 46 3.6 1
(CU881330) Podospora anserina mRNA sequence from clone HH0AB... 46 3.6 1
(CU875841) Podospora anserina mRNA sequence from clone HH0AB... 46 3.6 1
(FE246793) CAPG9607.fwd CAPG Naegleria gruberi amoeba stage ... 46 3.6 1
(AE017198) Lactobacillus johnsonii NCC 533, complete genome. 46 3.6 1
(AL164763) Tetraodon nigroviridis genome survey sequence T7 ... 36 4.9 2
(AC201854) Macaca mulatta chromosome 14 clone CH250-337D6, W... 32 6.7 2
(CC224853) CH261-183F15_RM1.1 CH261 Gallus gallus genomic cl... 34 8.7 2
(CC276974) CH261-94P2_Sp6.1 CH261 Gallus gallus genomic clon... 34 8.9 2
(CC212691) CH261-117M11_Sp6.1 CH261 Gallus gallus genomic cl... 34 8.9 2
(BZ437285) BONIQ47TF BO_1.6_2_KB_tot Brassica oleracea genom... 34 9.0 2
>(BJ441208) Dictyostelium discoideum cDNA clone:ddv46b06, 3' end,
single read.
Length = 775
Score = 1501 bits (757), Expect = 0.0
Identities = 766/766 (100%)
Strand = Plus / Minus
Query: 643 atctattgtcaatatgaaattggtgtgttattaaactctatcaatgataccatgattcca 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 atctattgtcaatatgaaattggtgtgttattaaactctatcaatgataccatgattcca 716
Query: 703 aaattggttgctgacgatattccattgattcaatcattgttattggatgttttcccaggt 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aaattggttgctgacgatattccattgattcaatcattgttattggatgttttcccaggt 656
Query: 763 tcacaattacaaccaattcaaatggatcaattacgtaaaaagattcaagaaattgccaaa 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tcacaattacaaccaattcaaatggatcaattacgtaaaaagattcaagaaattgccaaa 596
Query: 823 caaagacatttggttaccaaacaagaatgggttgaaaagatccttcaattacatcaaatt 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 caaagacatttggttaccaaacaagaatgggttgaaaagatccttcaattacatcaaatt 536
Query: 883 ctcaatatcaatcatggtgttatgatggttggtccatctggtggtggtaaaactacaagt 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ctcaatatcaatcatggtgttatgatggttggtccatctggtggtggtaaaactacaagt 476
Query: 943 tgggaggtttatttagaagccatcgaacaagttgataacattaaatccgaagctcatgtt 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tgggaggtttatttagaagccatcgaacaagttgataacattaaatccgaagctcatgtt 416
Query: 1003 atggatccaaaagctatcaccaaagatcaattatttggttcattggatttaacaactcgt 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 atggatccaaaagctatcaccaaagatcaattatttggttcattggatttaacaactcgt 356
Query: 1063 gaatggaccgatggtttattcactgcaacccttcgtcgtatcattgataatgttcgtggt 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gaatggaccgatggtttattcactgcaacccttcgtcgtatcattgataatgttcgtggt 296
Query: 1123 gaatccactaaacgtcattggatcattttcgatggtgatgttgatccagaatgggtagaa 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gaatccactaaacgtcattggatcattttcgatggtgatgttgatccagaatgggtagaa 236
Query: 1183 aatttgaactctctcttggatgataataaattattaacacttccaaatggtgaacgttta 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aatttgaactctctcttggatgataataaattattaacacttccaaatggtgaacgttta 176
Query: 1243 gcacttccaaataatgttagagttacgtttgaagtacaagatcttaaatatgcaacactc 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gcacttccaaataatgttagagttacgtttgaagtacaagatcttaaatatgcaacactc 116
Query: 1303 gctaccatttcacgttgtggtatggtttggtttagtgaagagattttaacaactcaaana 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 gctaccatttcacgttgtggtatggtttggtttagtgaagagattttaacaactcaaana 56
Query: 1363 ttttccaaaattatttagatactctttcaaanaaccattnatccac 1408
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 ttttccaaaattatttagatactctttcaaanaaccattnatccac 10
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,527,001,249
Number of extensions: 87541018
Number of successful extensions: 6497499
Number of sequences better than 10.0: 79
Length of query: 1417
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1393
Effective length of database: 97,308,875,965
Effective search space: 135551264219245
Effective search space used: 135551264219245
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home