Dictyostelium discoideum cDNA Clone VHH523

Sequence VHH523

AAATTTTAAG AAAATGCCTC ACTCATTCGG TCTCCGTGCT CGTACCAGAT
ACTTGTTCTC TCGTGGTTTC AGAAACCATG GTCTCTTACA AACCACCACC
TTCTTAAGAA CTTTCCGTTT AGGTGATTAC GTTGATATCA AAGCCACCGG
TAATGTACAC AAAGGTATGC CACACAAATT CTACCACGGT CGTACCGGTC
GTGTTTGGAA TGTTACTCCA CGTGCTGTTG GTGTCATCAT CAACAAACGT
GTTGGTCCAA GAATCATTGC CAAGAAAATC CACGTCAGAA CTGAACACGT
CAAACCATCA AACTCCATGG CTGCTCACTT AAAACGTATC CAAGAAAACA
AAAAAGCTGT CGTTGAAGCC AAGAAAGCCG GTAAATGGGT CGATGTTAGA
CGTAACCCAG CTGCACCAAA GGACGGTTTC TTTGTCAACC CAAGAAACAC
TGAATTCGTT GAAGTCAAAC CAGTCAAATA CGAACTTTTA TTATAAATTA
ATTTAAAAGA GTGGTGGCTA ATATGGTTCA ATCGCAATCC TTTGATTATC
CAAATTTGTC TTATTTAANA AAAAAA---- ------AAAT TTTAAGAAAA
TGCCTCACTC ATTCGGTCTC CGTGCTCGTA CCAGATACTT GTTCTCTCGT
GGTTTCAGAA ACCATGGTCT CTTACAAACC ACCACCTTCT TAAGAACTTT
CCGTTTAGGT GATTACGTTG ATATCAAAGC CACCGGTAAT GTACACAAAG
GTATGCCACA CAAATTCTAC CACGGTCGTA CCGGTCGTGT TTGGAATGTT
ACTCCACGTG CTGTTGGTGT CATCATCAAC AAACGTGTTG GTCCAAGAAT
CATTGCCAAG AAAATCCACG TCAGAACTGA ACACGTCAAA CCATCAAACT
CCATGGCTGC TCACTTAAAA CGTATCCAAG AAAACAAAAA AGCTGTCGTT
GAAGCCAAGA AAGCCGGTAA ATGGGTCGAT GTTAGACGTA ACCCAGCTGC
ACCAAAGGAC GGTTTCTTTG TCAACCCAAG AAACACTGAA TTCGTTGAAG
TCAAACCAGT CAAATACGAA CTTTTATTAT AAATTAATTT AAAAGAGTGG
GGCTAATAGG TTCAATCGCA ATCCTTNATT ATCCAAAT

Translated Amino Acid Sequence VHH523

kf*enaslirspcsyqilvlswfqkpwsltnhhllknfpfr*lr*yqshr*ctqryatqi
lprsyrsclecystccwchhqqtcwsknhcqenprqn*trqtiklhgcslktyprkqksc
r*sqesr*mgrc*t*psctkgrflcqpkkh*ir*sqtsqirtfiin*FKRVVANMVQSQS
FDYPNLSYLXKK---

---NFKKMPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMP
HKFYHGRTGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENK
KAVVEAKKAGKWVDVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELLL*inlkewg**vqs
qsxiiq

Homology VHH523 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHK774 (VHK774Q) /CSM/VH/VHK7-D/VHK774Q.Seq.d/                       1122   0.0
VHH523 (VHH523Q) /CSM/VH/VHH5-A/VHH523Q.Seq.d/                       1122   0.0
VFL168 (VFL168Q) /CSM/VF/VFL1-C/VFL168Q.Seq.d/                       1122   0.0
VFJ214 (VFJ214Q) /CSM/VF/VFJ2-A/VFJ214Q.Seq.d/                       1122   0.0
FC-193 (FC-193Q) /CSM/CG/CG-FC/FC-193Q.Seq.d/                        1118   0.0
VSB776 (VSB776Q) /CSM/VS/VSB7-D/VSB776Q.Seq.d/                       1110   0.0
VSI403 (VSI403Q) /CSM/VS/VSI4-A/VSI403Q.Seq.d/                       1106   0.0
VSF754 (VSF754Q) /CSM/VS/VSF7-C/VSF754Q.Seq.d/                       1106   0.0
VSB311 (VSB311Q) /CSM/VS/VSB3-A/VSB311Q.Seq.d/                       1102   0.0
FC-BQ22 (FC-BQ22Q) /CSM/FC/FC-BQ/FC-BQ22Q.Seq.d/                     1102   0.0

Homology VHH523 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ422514) Dictyostelium discoideum cDNA clone:ddv46m05, 5' ...  1136   0.0    1
(BJ424534) Dictyostelium discoideum cDNA clone:ddv52d19, 5' ...  1128   0.0    1
(BJ415743) Dictyostelium discoideum cDNA clone:ddv23g17, 5' ...  1128   0.0    1
(BJ414431) Dictyostelium discoideum cDNA clone:ddv19k04, 5' ...  1128   0.0    1
(AU262240) Dictyostelium discoideum vegetative cDNA clone:VS...  1116   0.0    1
(AU265734) Dictyostelium discoideum vegetative cDNA clone:VS...  1112   0.0    1
(AU284945) Dictyostelium discoideum gamete cDNA clone:FC-BQ2...  1108   0.0    1
(AU261946) Dictyostelium discoideum vegetative cDNA clone:VS...  1108   0.0    1
(AU261683) Dictyostelium discoideum vegetative cDNA clone:VS...  1106   0.0    1
(C23696) Dictyostelium discoideum gamete cDNA, clone FC-AK10.    1098   0.0    1

Homology VHH523 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54X53) RecName: Full=60S ribosomal protein L21;                     268   3e-70
FN357335_1(FN357335|pid:none) Schistosoma mansoni genome sequenc...   154   8e-36
AY813279_1(AY813279|pid:none) Schistosoma japonicum SJCHGC00639 ...   150   1e-34
GN110337_1(GN110337|pid:none) Sequence 15118 from Patent WO20090...   150   2e-34
GN110445_1(GN110445|pid:none) Sequence 15226 from Patent WO20090...   149   3e-34
AF475114_1(AF475114|pid:none) Triticum aestivum 60s ribosomal pr...   149   4e-34
AK354981_1(AK354981|pid:none) Hordeum vulgare subsp. vulgare mRN...   149   4e-34
GN110339_1(GN110339|pid:none) Sequence 15120 from Patent WO20090...   149   4e-34
GN110301_1(GN110301|pid:none) Sequence 15082 from Patent WO20090...   147   8e-34
GN110441_1(GN110441|pid:none) Sequence 15222 from Patent WO20090...   147   8e-34

Homology VHH523 vs Genome