Dictyostelium discoideum cDNA Clone VHH516

Sequence VHH516

---------- CTGGTCGTGT ATCATGTATT GGTCATCCAA CTCGTATTGG
TTCAGTTACA ATTGTCGGTG CAGTCTCTCC CCCAGGTGGA GATTTTGNTG
ATCCAGTCAC TGCTGCCACT TTAGGTATCG TCCAAGTATT CTGGGGTTTA
GATAAAAAAT TAGCACAACG TAAACATTTC CCATCCATCA ATTGGTTAAT
TTCTTTCTCC AAATATATGC AAGCTCTTGA TACTCATTAT GATCAAATGG
ATCCAGAATT CGTTCCACTC CGTACCAGAG CCAAGGAAAT TCTTCAAATG
GAAGAAGATC TCTCTGAAAT CGTCCAATTG GTCGGTCAAG ATTCTTTAGG
TGAATCTGAA AAGATTACCA TTGAAGTCGC TCGTATTATT CGTGATGATT
TCCTTCAACA AAATGGTTTC TCTCCATACG ATAAATGTTG TCCATTCTTC
AAGACCGTTT GGATGTTAAA GAATATGATG ACTTTCTACA ATTTAGCACA
AAAAGCTGTT GAATCAAGTA CCGCTGATAA TAAAGTTACT TGGAATCAAA
TTAAAAATGA ATTAAAAGAA ATCATTCACA GAATTACTTC AATGAAATTC
CAAGATCCAA CTGACGGTGA ACAAACTTTA ACTGCTCATT TCTCAACTCT
CAATGAAGAT ATCATTACTG CTTTCAGAAA CTTTAGTGAT TTAGTTTAAA
AT

Translated Amino Acid Sequence VHH516

---GRVSCIGHPTRIGSVTIVGAVSPPGGDFXDPVTAATLGIVQVFWGLDKKLAQRKHFP
SINWLISFSKYMQALDTHYDQMDPEFVPLRTRAKEILQMEEDLSEIVQLVGQDSLGESEK
ITIEVARIIRDDFLQQNGFSPYDKCCPFFKTVWMLKNMMTFYNLAQKAVESSTADNKVTW
NQIKNELKEIIHRITSMKFQDPTDGEQTLTAHFSTLNEDIITAFRNFSDLV*n

Homology VHH516 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHH516 (VHH516Q) /CSM/VH/VHH5-A/VHH516Q.Seq.d/                       1366   0.0
VFC688 (VFC688Q) /CSM/VF/VFC6-D/VFC688Q.Seq.d/                       1364   0.0
VFC742 (VFC742Q) /CSM/VF/VFC7-B/VFC742Q.Seq.d/                       1362   0.0
VHP385 (VHP385Q) /CSM/VH/VHP3-D/VHP385Q.Seq.d/                       1360   0.0
VHD171 (VHD171Q) /CSM/VH/VHD1-C/VHD171Q.Seq.d/                       1360   0.0
VHL630 (VHL630Q) /CSM/VH/VHL6-B/VHL630Q.Seq.d/                       1358   0.0
VFC543 (VFC543Q) /CSM/VF/VFC5-B/VFC543Q.Seq.d/                       1356   0.0
SLE162 (SLE162Q) /CSM/SL/SLE1-C/SLE162Q.Seq.d/                       1354   0.0
VFI209 (VFI209Q) /CSM/VF/VFI2-A/VFI209Q.Seq.d/                       1350   0.0
VHB101 (VHB101Q) /CSM/VH/VHB1-A/VHB101Q.Seq.d/                       1348   0.0

Homology VHH516 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U49169|U49169.1 Dictyostelium discoideum V-ATPase A subunit ...  1366   0.0    1
BI772943|BI772943.1 kq08f06.y1 TBN95TM-SSR Strongyloides ste...   115   2e-33  3
BI073337|BI073337.1 kt29f11.y1 Strongyloides ratti L2 pAMP1 ...   107   3e-24  3
BI773050|BI773050.1 kq33c01.y1 TBN95TM-SSR Strongyloides ste...   115   9e-22  1
BI772898|BI772898.1 kp97e10.y1 TBN95TM-SSR Strongyloides ste...    80   5e-19  3
BI703941|BI703941.1 kt23d10.y3 Strongyloides ratti L1 pAMP1 ...   100   5e-17  1
BI501052|BI501052.1 kx27d07.y1 Parastrongyloides trichosuri ...    66   9e-17  3
AB093509|AB093509.1 Saccharomyces exiguus VMA1-1 gene for va...    74   1e-10  3
AB093510|AB093510.1 Saccharomyces exiguus VMA1-2 gene for va...    74   9e-10  2
CK467947|CK467947.1 939296 MARC 4PIG Sus scrofa cDNA 5', mRN...    70   9e-10  2

Homology VHH516 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P54647) RecName: Full=V-type proton ATPase catalytic subunit A;...   461   e-128
(P38607) Vacuolar ATP synthase catalytic subunit A, osteoclast i...   319   9e-86
A56807(A56807) H+-transporting two-sector ATPase (EC 3.6.3.14), ...   318   2e-85
I50715(I50715) A2 isoform of vacuolar H+-ATPase subunit A - chic...   315   1e-84
(Q90647) RecName: Full=V-type proton ATPase catalytic subunit A;...   315   1e-84
AX407287_1(AX407287|pid:none) Sequence 58 from Patent WO0226984.      315   1e-84
(P31404) RecName: Full=V-type proton ATPase catalytic subunit A;...   315   2e-84
M80430_1(M80430|pid:none) Bovine vacuolar H+-ATPase A subunit mR...   315   2e-84
BC105145_1(BC105145|pid:none) Bos taurus ATPase, H+ transporting...   315   2e-84
(P31400) RecName: Full=V-type proton ATPase catalytic subunit A;...   314   3e-84

Homology VHH516 vs Genome