Homology VHH388 vs Protein

Query= VHH388 (VHH388Q) /CSM/VH/VHH3-D/VHH388Q.Seq.d/
         (1227 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

T18270(T18270) hypothetical protein - slime mold (Dictyostelium ...   337   e-112
T18269(T18269) hypothetical protein 2 - slime mold (Dictyosteliu...    76   4e-12
AC115612_9(AC115612|pid:none) Dictyostelium discoideum chromosom...    45   5e-05
AC116957_104(AC116957|pid:none) Dictyostelium discoideum chromos...    52   5e-05
AC116984_63(AC116984|pid:none) Dictyostelium discoideum chromoso...    39   0.002
AC117072_39(AC117072|pid:none) Dictyostelium discoideum chromoso...    40   0.008
(P54681) RecName: Full=Protein rtoA; AltName: Full=Ratio-A; Flag...    45   0.011
AC116032_6(AC116032|pid:none) Dictyostelium discoideum chromosom...    45   0.011
AC115680_4(AC115680|pid:none) Dictyostelium discoideum chromosom...    34   1.4
(P22698) RecName: Full=Spore germination protein 270-11;  &B3562...    36   3.9
AB365364_1(AB365364|pid:none) Misgurnus anguillicaudatus D1/3-10...    36   5.1
AB115064_1(AB115064|pid:none) Misgurnus anguillicaudatus D1/3-10...    35   6.7
EF568108_23(EF568108|pid:none) Glossina pallidipes salivary glan...    35   6.7
CP002171_143(CP002171|pid:none) Thermoanaerobacterium thermosacc...    35   8.8

>T18270(T18270) hypothetical protein - slime mold (Dictyostelium
           discoideum)  &U20608_2(U20608|pid:none)
          Length = 1123

 Score =  337 bits (864), Expect(3) = e-112
 Identities = 163/164 (99%), Positives = 164/164 (100%)
 Frame = +2

Query: 2   DTPSFRDENGNWLRLYDGSIVSSDPIVYFKLPSIPRSVGYNSFSNITFLYDNINMTRDQD 181
           +TPSFRDENGNWLRLYDGSIVSSDPIVYFKLPSIPRSVGYNSFSNITFLYDNINMTRDQD
Sbjct: 177 NTPSFRDENGNWLRLYDGSIVSSDPIVYFKLPSIPRSVGYNSFSNITFLYDNINMTRDQD 236

Query: 182 FYNIAYLENDEIPRDLPFSLISLDPVTYSYLTSVRLINNIMYPFTFDPTINKFTSKFVIP 361
           FYNIAYLENDEIPRDLPFSLISLDPVTYSYLTSVRLINNIMYPFTFDPTINKFTSKFVIP
Sbjct: 237 FYNIAYLENDEIPRDLPFSLISLDPVTYSYLTSVRLINNIMYPFTFDPTINKFTSKFVIP 296

Query: 362 ANTAFDKISFAIIGGLSTEFYYSGFTINNSPAFDNEGPLFSEFY 493
           ANTAFDKISFAIIGGLSTEFYYSGFTINNSPAFDNEGPLFSEFY
Sbjct: 297 ANTAFDKISFAIIGGLSTEFYYSGFTINNSPAFDNEGPLFSEFY 340

 Score = 85.1 bits (209), Expect(3) = e-112
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +3

Query: 498 VNENTTYSSLGYPKTSGWRFRITDKYNGFRNGFIKAMG 611
           VNENTTYSSLGYPKTSGWRFRITDKYNGFRNGFIKAMG
Sbjct: 342 VNENTTYSSLGYPKTSGWRFRITDKYNGFRNGFIKAMG 379

 Score = 30.8 bits (68), Expect(3) = e-112
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +1

Query: 598 LKLWGSVDSTIIKLNFT 648
           +K  GSVDSTIIKLNFT
Sbjct: 375 IKAMGSVDSTIIKLNFT 391

 Score =  251 bits (641), Expect = 6e-65
 Identities = 130/185 (70%), Positives = 133/185 (71%), Gaps = 1/185 (0%)
 Frame = +2

Query: 605  YGVQLIVQLLN*TSXXXXQLPSGVYSIPVGSSHNFGYIQKSNHLLPIYSQLPTCQVXXXX 784
            +GV+L+       S    QLPS VYSIPVGSSHNFGYIQKSNHLLPIYSQLPTCQV
Sbjct: 944  WGVELL-------SNNTYQLPSWVYSIPVGSSHNFGYIQKSNHLLPIYSQLPTCQVTPTP 996

Query: 785  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPIPRPITCSKLDDVLNFNSTETTYC 964
                                              SPIPRPITCSKLDDVLNFNSTET YC
Sbjct: 997  TQTPTQTPTETPTPTETPTETPTQTPTQTPTQ--SPIPRPITCSKLDDVLNFNSTETIYC 1054

Query: 965  KGRGPTYCIDGYGSECETNDVDG-RIKCTTKSNFMSCKGDHLVCKSNYLTCKVNISEGTP 1141
            KGRGPTYCIDGYGSECETNDVDG RIKCTTKSNFMSCKGDHLVCKSNYLTCKVNISEGTP
Sbjct: 1055 KGRGPTYCIDGYGSECETNDVDGRRIKCTTKSNFMSCKGDHLVCKSNYLTCKVNISEGTP 1114

Query: 1142 FHVHD 1156
            FHVHD
Sbjct: 1115 FHVHD 1119

 Score = 40.4 bits (93), Expect = 0.21
 Identities = 20/43 (46%), Positives = 28/43 (65%)
 Frame = +2

Query: 641 TSXXXXQLPSGVYSIPVGSSHNFGYIQKSNHLLPIYSQLPTCQ 769
           TS     LP  + +I VGSS +FGYIQK++ ++P+ SQ   CQ
Sbjct: 840 TSFNSYSLPIWLPAIQVGSSFSFGYIQKTDTVVPLSSQSVVCQ 882

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,689,441,953
Number of extensions: 49303811
Number of successful extensions: 108406
Number of sequences better than 10.0: 14
Number of HSP's gapped: 108349
Number of HSP's successfully gapped: 23
Length of query: 409
Length of database: 1,732,582,204
Length adjustment: 134
Effective length of query: 275
Effective length of database: 1,015,787,662
Effective search space: 279341607050
Effective search space used: 279341607050
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)