Dictyostelium discoideum cDNA Clone VHH388

Sequence VHH388

TGATACTCCA TCATTTAGAG ATGAAAATGG TAATTGGTTA AGACTTTATG
ATGGTTCAAT CGTTTCTAGT GATCCAATAG TTTATTTTAA ATTACCATCA
ATTCCAAGAT CAGTCGGCTA TAATTCATTT TCAAATATTA CATTTTTATA
TGATAATATT AATATGACAA GGGATCAAGA TTTTTATAAT ATTGCATATT
TAGAAAATGA TGAAATTCCA CGTGATTTAC CATTTTCATT AATTTCTTTA
GATCCAGTAA CTTATTCTTA TTTAACTTCA GTTAGATTAA TTAATAATAT
TATGTACCCA TTCACTTTTG ATCCAACCAT TAATAAATTC ACAAGTAAAT
TTGTTATTCC AGCAAATACT GCATTCGATA AGATTTCATT TGCAATTATT
GGTGGTTTAT CAACAGAATT TTATTATTCA GGTTTTACAA TTAATAATTC
ACCAGCTTTC GATAATGAAG GTCCATTATT TAGTGAATTC TACCNAAGTA
AATGAAAATA CTACTTATTC CTCTTTAGGT TATCCAAAAA CTTCTGGTTG
GAGATTTAGA ATCACTGATA AATACAATGG TTTCAGAAAT GGTTTTATTA
AAGCTATGGG GTTCAGTTGA TAGTACAATT ATTAAATTAA ACTTCAC---
-------TCA ACTCCCAAGT GGGGTATATA GTATCCCAGT TGGTTCATCT
CACAATTTTG GTTATATCCA AAAATCAAAC CATCTTTTAC CAATTTATTC
ACAATTACCA ACTTGTCAAG TAACTCCAAC TCCAACACCA ACTCAAACTC
CAACTCAAAC TCCAACTGAA ACCCCAACTC CAACCGAAAC TCCAACCGAA
ACTCCAACTC AAACTCCAAC TCAAACACCA ACTCAATCAC CAATTCCAAG
ACCAATAACT TGTTCAAAAC TTGATGATGT TCTTAATTTC AATAGCACAG
AAACTACTTA CTGTAAAGGT AGAGGTCCAA CCTACTGTAT TGATGGCTAT
GGTTCAGAAT GTGAAACCAA CGATGTTGAT GGAAGAATTA AATGTACAAC
AAAGAGCAAT TTCATGAGCT GTAAGGGTGA TCATTTAGTT TGTAAATCAA
ACTATCTTAC ATGTAAAGTC AATATTTCTG AAGGTACACC ATTCCATGTT
CACGATTCTT CTTTACAATA AAATATTTTA AATAACCTAT CAAAGAAATA
AATAAATTTT AAAATTTNCT TTTTAAA

Translated Amino Acid Sequence VHH388

*ysii*r*kw*lvktl*wfnrf**snslf*itinskisrl*fifkyyifi**y*ydkgsr
fl*ycifrk**nst*ftifinffrssnlflfnfs*in**yyvpihf*snh**ihk*icys
skycir*dficnywwfinrillfrfyn**ftsfr**rsii**ilpk*mkillipl*VIQK
LLVGDLESLINTMVSEMVLLKLWGSVDSTIIKLNF---

---QLPSGVYSIPVGSSHNFGYIQKSNHLLPIYSQLPTCQVTPTPTPTQTPTQTPTETPT
PTETPTETPTQTPTQTPTQSPIPRPITCSKLDDVLNFNSTETTYCKGRGPTYCIDGYGSE
CETNDVDGRIKCTTKSNFMSCKGDHLVCKSNYLTCKVNISEGTPFHVHDSSLQ*nilnnl
skk*infkixfl

Homology VHH388 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHH388 (VHH388Q) /CSM/VH/VHH3-D/VHH388Q.Seq.d/                       1463   0.0
VHK380 (VHK380Q) /CSM/VH/VHK3-D/VHK380Q.Seq.d/                        870   0.0
VHK730 (VHK730Q) /CSM/VH/VHK7-B/VHK730Q.Seq.d/                        854   0.0
VHD539 (VHD539Q) /CSM/VH/VHD5-B/VHD539Q.Seq.d/                        854   0.0
SHC383 (SHC383Q) /CSM/SH/SHC3-D/SHC383Q.Seq.d/                        670   0.0
VHN694 (VHN694Q) /CSM/VH/VHN6-D/VHN694Q.Seq.d/                        648   0.0
VSJ853 (VSJ853Q) /CSM/VS/VSJ8-C/VSJ853Q.Seq.d/                        642   0.0
VHD343 (VHD343Q) /CSM/VH/VHD3-B/VHD343Q.Seq.d/                        626   e-178
VHO515 (VHO515Q) /CSM/VH/VHO5-A/VHO515Q.Seq.d/                        622   e-177
FC-AK17 (FC-AK17Q) /CSM/FC/FC-AK/FC-AK17Q.Seq.d/                      617   e-175

Homology VHH388 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ422452) Dictyostelium discoideum cDNA clone:ddv45p21, 5' ...  1277   0.0    1
(U20608) Dictyostelium discoideum unknown spore germination-...   765   0.0    7
(BJ424285) Dictyostelium discoideum cDNA clone:ddv51p19, 5' ...   603   0.0    3
(BJ424424) Dictyostelium discoideum cDNA clone:ddv52l07, 5' ...   587   0.0    3
(BJ420159) Dictyostelium discoideum cDNA clone:ddv38m09, 5' ...   587   0.0    3
(BJ441195) Dictyostelium discoideum cDNA clone:ddv45p21, 3' ...   507   0.0    2
(BJ392752) Dictyostelium discoideum cDNA clone:dds28f21, 5' ...   670   0.0    1
(BJ432860) Dictyostelium discoideum cDNA clone:ddv20g06, 3' ...   500   0.0    2
(BJ439228) Dictyostelium discoideum cDNA clone:ddv39f20, 3' ...   500   0.0    2
(BJ404525) Dictyostelium discoideum cDNA clone:dds28f21, 3' ...   500   0.0    2

Homology VHH388 vs Protein

Sequences producing significant alignments:                      (bits) Value


T18270(T18270) hypothetical protein - slime mold (Dictyostelium ...   337   e-112
T18269(T18269) hypothetical protein 2 - slime mold (Dictyosteliu...    76   4e-12
AC115612_9(AC115612|pid:none) Dictyostelium discoideum chromosom...    45   5e-05
AC116957_104(AC116957|pid:none) Dictyostelium discoideum chromos...    52   5e-05
AC116984_63(AC116984|pid:none) Dictyostelium discoideum chromoso...    39   0.002
AC117072_39(AC117072|pid:none) Dictyostelium discoideum chromoso...    40   0.008
(P54681) RecName: Full=Protein rtoA; AltName: Full=Ratio-A; Flag...    45   0.010
AC116032_6(AC116032|pid:none) Dictyostelium discoideum chromosom...    45   0.010
AC115680_4(AC115680|pid:none) Dictyostelium discoideum chromosom...    34   1.3
(P22698) RecName: Full=Spore germination protein 270-11;  &B3562...    36   3.7

Homology VHH388 vs Genome